DK961792 |
Clone id |
TST39A01NGRL0011_C04 |
Library |
TST39 |
Length |
655 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_C04. 5' end sequence. |
Accession |
DK961792 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
TTCGAGGGAGCCTTAGCCTTTGAAGAGAGTCTTAACCCTGTTAACTCTACCCCAGACATT GGTCCAGATCCTAGCTCAAGGGCTGACCCACGTGACGAACAACATGAAGAAGACTATACA CTTCCTTTGCAAAGGAATGATGAAATTTTATCACCCCACATACCCACAAGGCGGCGAAGG TTCCGCTTCAGATCAAAAGGGCTGGCGTCGGTTCTTTTTGTAGCAATGGTTGCTTACTTT CTTTGGCAGTATGGCCCTTCAACTGTTTTGCTGGAAGAGGAACTAGAAACTAAAAATAAT GATGAGTCAGAGCAGCCTCTGGTTTACAGCATCTACTCCAAGCTCATGGTCTATCCTAGC ATAAACTCTTCATGGGTGTCTTCTATCCCTGCCTATCCAGACAATGCAGTCCCCAGATCT CCATCTGCAATATCAAAGATTATTGCGAGAGATGTTGTGCGCCACAGTACTTGGCTTGGC ACTGCTGCAGAAGCAGCACCTACTTCTGATTCAAAAGAAACATCCACTGCCATTTTTCCT TTACGAGGGAATGTGTATCCTGATGGGTTGTACTACATATCGGCTAGGTTTGGAAATCCT TCACGTGAGTACTTCTTGGACATGGACACAGGAAGTGACCTTACCTGGCTGCAGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q0IU52 |
Definition |
sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica |
Align length |
45 |
Score (bit) |
58.9 |
E-value |
2.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PGR6 |
Definition |
tr|A7PGR6|A7PGR6_VITVI Chromosome chr17 scaffold_16, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
152 |
Score (bit) |
77.4 |
E-value |
7.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961792|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_C04, 5' (655 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PGR6|A7PGR6_VITVI Chromosome chr17 scaffold_16, whole genom... 77 7e-13 tr|B8A371|B8A371_MAIZE Putative uncharacterized protein OS=Zea m... 77 9e-13 tr|Q5Z6M6|Q5Z6M6_ORYSJ Os06g0268700 protein OS=Oryza sativa subs... 77 1e-12 tr|A2YBJ3|A2YBJ3_ORYSI Putative uncharacterized protein OS=Oryza... 77 1e-12 tr|B7ZZY5|B7ZZY5_MAIZE Putative uncharacterized protein OS=Zea m... 76 2e-12 tr|B6TY60|B6TY60_MAIZE Aspartic proteinase Asp1 OS=Zea mays PE=2... 76 2e-12 tr|Q2QWY7|Q2QWY7_ORYSJ Os12g0177500 protein OS=Oryza sativa subs... 75 4e-12 tr|Q2QWY6|Q2QWY6_ORYSJ Eukaryotic aspartyl protease family prote... 75 4e-12 tr|B8BNF8|B8BNF8_ORYSI Putative uncharacterized protein OS=Oryza... 75 4e-12 tr|A9TY65|A9TY65_PHYPA Predicted protein OS=Physcomitrella paten... 75 4e-12 tr|A3CFG4|A3CFG4_ORYSJ Putative uncharacterized protein OS=Oryza... 75 4e-12 tr|B6U917|B6U917_MAIZE Aspartic proteinase Asp1 OS=Zea mays PE=2... 75 5e-12 tr|Q6YWQ0|Q6YWQ0_ORYSJ Os02g0730700 protein OS=Oryza sativa subs... 72 4e-11 tr|B8AI13|B8AI13_ORYSI Putative uncharacterized protein OS=Oryza... 72 4e-11 tr|A3AB11|A3AB11_ORYSJ Putative uncharacterized protein OS=Oryza... 72 4e-11 tr|A7NVF4|A7NVF4_VITVI Chromosome chr18 scaffold_1, whole genome... 71 5e-11 tr|B4FEL4|B4FEL4_MAIZE Putative uncharacterized protein OS=Zea m... 69 2e-10 tr|Q5NT86|Q5NT86_DAUCA Nucellin-like protein OS=Daucus carota GN... 68 6e-10 tr|A9SIU7|A9SIU7_PHYPA Predicted protein (Fragment) OS=Physcomit... 68 6e-10 tr|Q53NE7|Q53NE7_ORYSJ Eukaryotic aspartyl protease family prote... 67 7e-10 tr|B8BJH1|B8BJH1_ORYSI Putative uncharacterized protein OS=Oryza... 67 7e-10 tr|A3C9A6|A3C9A6_ORYSJ Putative uncharacterized protein OS=Oryza... 67 7e-10 tr|B8LRU1|B8LRU1_PICSI Putative uncharacterized protein OS=Picea... 67 1e-09 tr|Q9M9A8|Q9M9A8_ARATH F27J15.15 (Putative uncharacterized prote... 66 2e-09 tr|A9PFJ8|A9PFJ8_POPTR Putative uncharacterized protein OS=Popul... 66 2e-09 tr|A7PKR4|A7PKR4_VITVI Chromosome chr7 scaffold_20, whole genome... 66 2e-09 tr|Q8LCW1|Q8LCW1_ARATH Nucellin-like protein OS=Arabidopsis thal... 65 4e-09 tr|Q8GWM0|Q8GWM0_ARATH Putative nucellin OS=Arabidopsis thaliana... 65 4e-09 tr|Q9SZC6|Q9SZC6_ARATH Nucellin-like protein OS=Arabidopsis thal... 64 6e-09 tr|Q9CAQ7|Q9CAQ7_ARATH Nucellin-like protein; 27671-25467 OS=Ara... 63 1e-08
>tr|A7PGR6|A7PGR6_VITVI Chromosome chr17 scaffold_16, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017657001 PE=3 SV=1 Length = 467
Score = 77.4 bits (189), Expect = 7e-13 Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 5/152 (3%) Frame = +1
Query: 214 LFVAMVAYFLWQYGPSTVLLEEELETKNNDESEQPLVYSIYSKLMVYPSINSSWVSSIPA 393 L V++ + LW + S+ L+E L KN+D + L +YP + S + + Sbjct: 4 LGVSLFVFLLWNFASSSPLVE--LRRKNDDREPTSFI------LPLYPKLGSRSLGDLEL 55
Query: 394 YPDNAVP-----RSPSAISKIIARDVVRHSTWLGTAAEAAPTSDSKETSTAIFPLRGNVY 558 V P I+K+ TS S S+ IFP+RG+VY Sbjct: 56 KLGKFVDFHVNDMKPGGINKLA-------------------TSVSAFDSSTIFPVRGDVY 96
Query: 559 PDGLYYISARFGNPSREYFLDMDTGSDLTWLQ 654 P+GLY+ G+P R YFLDMDTGSDLTW+Q Sbjct: 97 PNGLYFTHIFVGSPPRRYFLDMDTGSDLTWIQ 128
>tr|B8A371|B8A371_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 557
Score = 77.0 bits (188), Expect = 9e-13 Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 2/92 (2%) Frame = +1
Query: 385 IPAYPDNAVPRSPSAIS--KIIARDVVRHSTWLGTAAEAAPTSDSKETSTAIFPLRGNVY 558 +P YP R+ K+ AR V E A + ++ STA+ P++GNV+ Sbjct: 123 LPLYPKARQGRALREFGDVKLAARRVDDGGRKARNRMEVAKAATARTNSTALLPIKGNVF 182
Query: 559 PDGLYYISARFGNPSREYFLDMDTGSDLTWLQ 654 PDG YY S GNP R YFLD+DTGSDLTW+Q Sbjct: 183 PDGQYYTSIFIGNPPRPYFLDVDTGSDLTWIQ 214
>tr|Q5Z6M6|Q5Z6M6_ORYSJ Os06g0268700 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0084K06.4 PE=2 SV=1 Length = 538
Score = 76.6 bits (187), Expect = 1e-12 Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 7/66 (10%) Frame = +1
Query: 478 GTAAEAAPT-------SDSKETSTAIFPLRGNVYPDGLYYISARFGNPSREYFLDMDTGS 636 G A E+A + ++++E S+A+ P+RGNV+PDG YY S GNP R YFLD+DTGS Sbjct: 121 GAAGESAGSVKPDGAGAEARENSSALLPIRGNVFPDGQYYTSMYIGNPPRPYFLDVDTGS 180
Query: 637 DLTWLQ 654 DLTW+Q Sbjct: 181 DLTWIQ 186
>tr|A2YBJ3|A2YBJ3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22475 PE=3 SV=1 Length = 538
Score = 76.6 bits (187), Expect = 1e-12 Identities = 32/59 (54%), Positives = 44/59 (74%) Frame = +1
Query: 478 GTAAEAAPTSDSKETSTAIFPLRGNVYPDGLYYISARFGNPSREYFLDMDTGSDLTWLQ 654 G+ + ++++E S+A+ P+RGNV+PDG YY S GNP R YFLD+DTGSDLTW+Q Sbjct: 128 GSVKPDSAGAEARENSSALLPIRGNVFPDGQYYTSMYIGNPPRPYFLDVDTGSDLTWIQ 186
>tr|B7ZZY5|B7ZZY5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 415
Score = 75.9 bits (185), Expect = 2e-12 Identities = 33/58 (56%), Positives = 44/58 (75%) Frame = +1
Query: 481 TAAEAAPTSDSKETSTAIFPLRGNVYPDGLYYISARFGNPSREYFLDMDTGSDLTWLQ 654 T + AA + S +STA+F L+G+VYP G YY++ GNP++ YFLD+DTGSDLTWLQ Sbjct: 23 TPSRAATMARSPSSSTAVFQLQGDVYPTGHYYVTMNIGNPAKPYFLDVDTGSDLTWLQ 80
>tr|B6TY60|B6TY60_MAIZE Aspartic proteinase Asp1 OS=Zea mays PE=2 SV=1 Length = 415
Score = 75.9 bits (185), Expect = 2e-12 Identities = 33/58 (56%), Positives = 44/58 (75%) Frame = +1
Query: 481 TAAEAAPTSDSKETSTAIFPLRGNVYPDGLYYISARFGNPSREYFLDMDTGSDLTWLQ 654 T + AA + S +STA+F L+G+VYP G YY++ GNP++ YFLD+DTGSDLTWLQ Sbjct: 23 TPSRAATMARSPSSSTAVFQLQGDVYPTGHYYVTMNIGNPAKPYFLDVDTGSDLTWLQ 80
>tr|Q2QWY7|Q2QWY7_ORYSJ Os12g0177500 protein OS=Oryza sativa subsp. japonica GN=Os12g0177500 PE=2 SV=2 Length = 421
Score = 75.1 bits (183), Expect = 4e-12 Identities = 32/46 (69%), Positives = 38/46 (82%) Frame = +1
Query: 517 ETSTAIFPLRGNVYPDGLYYISARFGNPSREYFLDMDTGSDLTWLQ 654 E S+A+FPL G+VYP GLYY++ GNP R YFLD+DTGSDLTWLQ Sbjct: 40 EESSAVFPLYGDVYPHGLYYVAMSIGNPPRPYFLDVDTGSDLTWLQ 85
>tr|Q2QWY6|Q2QWY6_ORYSJ Eukaryotic aspartyl protease family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os12g07780 PE=3 SV=2 Length = 451
Score = 75.1 bits (183), Expect = 4e-12 Identities = 32/46 (69%), Positives = 38/46 (82%) Frame = +1
Query: 517 ETSTAIFPLRGNVYPDGLYYISARFGNPSREYFLDMDTGSDLTWLQ 654 E S+A+FPL G+VYP GLYY++ GNP R YFLD+DTGSDLTWLQ Sbjct: 40 EESSAVFPLYGDVYPHGLYYVAMSIGNPPRPYFLDVDTGSDLTWLQ 85
>tr|B8BNF8|B8BNF8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37668 PE=4 SV=1 Length = 421
Score = 75.1 bits (183), Expect = 4e-12 Identities = 32/46 (69%), Positives = 38/46 (82%) Frame = +1
Query: 517 ETSTAIFPLRGNVYPDGLYYISARFGNPSREYFLDMDTGSDLTWLQ 654 E S+A+FPL G+VYP GLYY++ GNP R YFLD+DTGSDLTWLQ Sbjct: 40 EESSAVFPLYGDVYPHGLYYVAMSIGNPPRPYFLDVDTGSDLTWLQ 85
>tr|A9TY65|A9TY65_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_152498 PE=4 SV=1 Length = 414
Score = 75.1 bits (183), Expect = 4e-12 Identities = 30/43 (69%), Positives = 38/43 (88%) Frame = +1
Query: 526 TAIFPLRGNVYPDGLYYISARFGNPSREYFLDMDTGSDLTWLQ 654 TA +P+ GN+YPDGLYY++ R GNP++ Y+LDMDTGSDLTWLQ Sbjct: 16 TAAYPIGGNIYPDGLYYMAMRIGNPAKLYYLDMDTGSDLTWLQ 58
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