DK961784 |
Clone id |
TST39A01NGRL0011_B20 |
Library |
TST39 |
Length |
638 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_B20. 5' end sequence. |
Accession |
DK961784 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
TGCTCCTCTCACGATCTACGAAGACCTGCTATATATAATGACGGCGACCTTGCAGAGGCC GTGTCAGTGCAGCACAAAGGGTTCCCAAAGCGGGACGCCTTCTCACTATTCATCGCGCTA TCCTCTCCTCTCTCTCTCTCCCTCCCTCTCTCTCTCTCTTCTCCGTTTCTCTAATTTGAA GATGGCGCAGCTGCAGGGAAGAAGAAGCGGTCAACATTCCAGCATATGGCTCTTCCATGC GATAGCTGCCGCCGCCGTCCTCCTGTGCTGCTTGCCCGCTTCATCTGCCACAGTTCATAC GGTGGGAGGTGATAGTGGATGGTCCATCATGACTCCTTACAGTGCTTGGCTTCAAGGCAA AACCTTCAACGTTGGCGACAGTCTCTCTTTCAAATACGAGCAAGATTGGCACGATGTTAC TGAGGTGACCAAGGATGACTATTATTCCTGCAATGGCGTTGGCCCTTCAACCATCAACAA GTGGACAGACGGTGCCACCTCAGTGCAGTTGGACAAACCAGGAGAAAGATACTTCATTTG CTCTTTCATTGGACATTGCCCCCCCATGAAGCTTGCCATCAATGTTGTTGCTGCTGCTGT TTCCGTTTCTGGCTCAAGCTCAAACTCCACAGAGGAGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P80728 |
Definition |
sp|P80728|MAVI_CUCPE Mavicyanin OS=Cucurbita pepo |
Align length |
92 |
Score (bit) |
85.5 |
E-value |
2.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961784|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_B20, 5' (638 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P80728|MAVI_CUCPE Mavicyanin OS=Cucurbita pepo PE=1 SV=1 86 2e-16 sp|Q41001|BCP_PEA Blue copper protein OS=Pisum sativum PE=2 SV=1 82 2e-15 sp|P00302|STEL_RHUVE Stellacyanin OS=Rhus vernicifera PE=1 SV=1 72 2e-12 sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1 OS=Arabidopsis... 72 2e-12 sp|P00303|BABL_CUCSA Basic blue protein OS=Cucumis sativus PE=1 ... 69 2e-11 sp|P29602|CPC_CUCSA Cucumber peeling cupredoxin OS=Cucumis sativ... 69 2e-11 sp|P42849|UMEC_ARMRU Umecyanin OS=Armoracia rusticana PE=1 SV=1 65 3e-10 sp|O80517|BCB2_ARATH Uclacyanin-2 OS=Arabidopsis thaliana GN=At2... 65 4e-10 sp|P60496|BABL_LILLO Chemocyanin OS=Lilium longiflorum PE=1 SV=1 64 5e-10 sp|Q07488|BCB1_ARATH Blue copper protein OS=Arabidopsis thaliana... 59 3e-08 sp|Q8LC95|ENL3_ARATH Early nodulin-like protein 3 OS=Arabidopsis... 57 6e-08 sp|Q02917|NO552_SOYBN Early nodulin-55-2 OS=Glycine max GN=ENOD5... 57 1e-07 sp|Q39131|LAML_ARATH Lamin-like protein OS=Arabidopsis thaliana ... 55 2e-07 sp|Q8LG89|BABL_ARATH Putative basic blue protein OS=Arabidopsis ... 55 2e-07 sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2 OS=Arabidopsis... 53 1e-06 sp|P93328|NO16_MEDTR Early nodulin-16 OS=Medicago truncatula GN=... 52 3e-06 sp|P93329|NO20_MEDTR Early nodulin-20 OS=Medicago truncatula GN=... 45 3e-04 sp|Q05544|NO551_SOYBN Early nodulin-55-1 (Fragment) OS=Glycine m... 43 0.001 sp|Q98BI3|PNP_RHILO Polyribonucleotide nucleotidyltransferase OS... 35 0.43 sp|Q8FXS9|PNP_BRUSU Polyribonucleotide nucleotidyltransferase OS... 35 0.43 sp|B0CK15|PNP_BRUSI Polyribonucleotide nucleotidyltransferase OS... 35 0.43 sp|A5VTB6|PNP_BRUO2 Polyribonucleotide nucleotidyltransferase OS... 35 0.43 sp|Q8YEB7|PNP_BRUME Polyribonucleotide nucleotidyltransferase OS... 35 0.43 sp|A9M9Z8|PNP_BRUC2 Polyribonucleotide nucleotidyltransferase OS... 35 0.43 sp|Q57A96|PNP_BRUAB Polyribonucleotide nucleotidyltransferase OS... 35 0.43 sp|Q2YQR3|PNP_BRUA2 Polyribonucleotide nucleotidyltransferase OS... 35 0.43 sp|Q1GKK5|PNP_SILST Polyribonucleotide nucleotidyltransferase OS... 34 0.56 sp|Q5LN23|PNP_SILPO Polyribonucleotide nucleotidyltransferase OS... 34 0.56 sp|A6WWW1|PNP_OCHA4 Polyribonucleotide nucleotidyltransferase OS... 34 0.56 sp|A9CKQ7|PNP_AGRT5 Polyribonucleotide nucleotidyltransferase OS... 34 0.56
>sp|P80728|MAVI_CUCPE Mavicyanin OS=Cucurbita pepo PE=1 SV=1 Length = 108
Score = 85.5 bits (210), Expect = 2e-16 Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 2/92 (2%) Frame = +2
Query: 290 TVHTVGGDSGWSIMTPY--SAWLQGKTFNVGDSLSFKYEQDWHDVTEVTKDDYYSCNGVG 463 TVH VG +GW+ + PY + W F+VGDSL F Y +H+V +V ++ + SCN Sbjct: 2 TVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSS 61
Query: 464 PSTINKWTDGATSVQLDKPGERYFICSFIGHC 559 P+ +T GA S+ L +PG YF+C GHC Sbjct: 62 PAA--SYTSGADSIPLKRPGTFYFLCGIPGHC 91
>sp|Q41001|BCP_PEA Blue copper protein OS=Pisum sativum PE=2 SV=1 Length = 189
Score = 82.0 bits (201), Expect = 2e-15 Identities = 43/89 (48%), Positives = 52/89 (58%) Frame = +2
Query: 290 TVHTVGGDSGWSIMTPYSAWLQGKTFNVGDSLSFKYEQDWHDVTEVTKDDYYSCNGVGPS 469 TV+TVG SGW I YS W KTF VGDSL F Y H V EV + DY SC + Sbjct: 25 TVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSC--TSGN 82
Query: 470 TINKWTDGATSVQLDKPGERYFICSFIGH 556 +I+ + GAT++ L K G+ YFIC GH Sbjct: 83 SISTDSTGATTIPLKKAGKHYFICGVPGH 111
>sp|P00302|STEL_RHUVE Stellacyanin OS=Rhus vernicifera PE=1 SV=1 Length = 107
Score = 72.4 bits (176), Expect = 2e-12 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 7/97 (7%) Frame = +2
Query: 290 TVHTVGGDSGWSIMTPYSA-------WLQGKTFNVGDSLSFKYEQDWHDVTEVTKDDYYS 448 TV+TVG +GW + P+ W KTF++GD L FKY++ +H+V +VT+ +Y S Sbjct: 1 TVYTVGDSAGWKV--PFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQS 58
Query: 449 CNGVGPSTINKWTDGATSVQLDKPGERYFICSFIGHC 559 CN P I + G + L G++Y+IC HC Sbjct: 59 CNDTTP--IASYNTGBBRINLKTVGQKYYICGVPKHC 93
>sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2 Length = 182
Score = 72.4 bits (176), Expect = 2e-12 Identities = 41/92 (44%), Positives = 50/92 (54%), Gaps = 5/92 (5%) Frame = +2
Query: 299 TVGGDSG-WSIMTP----YSAWLQGKTFNVGDSLSFKYEQDWHDVTEVTKDDYYSCNGVG 463 TVGG SG W I ++ W Q F VGD + F+YE V EVTK+ Y SCN Sbjct: 32 TVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTN 91
Query: 464 PSTINKWTDGATSVQLDKPGERYFICSFIGHC 559 P + +TDG T V+LD+ G YFI GHC Sbjct: 92 P--LANYTDGETKVKLDRSGPFYFISGANGHC 121
>sp|P00303|BABL_CUCSA Basic blue protein OS=Cucumis sativus PE=1 SV=1 Length = 96
Score = 69.3 bits (168), Expect = 2e-11 Identities = 35/89 (39%), Positives = 49/89 (55%) Frame = +2
Query: 293 VHTVGGDSGWSIMTPYSAWLQGKTFNVGDSLSFKYEQDWHDVTEVTKDDYYSCNGVGPST 472 V+ VGG GW+ T +W +GK F GD L F Y H+V V + + +CN P+ Sbjct: 2 VYVVGGSGGWTFNT--ESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCN--TPAG 57
Query: 473 INKWTDGATSVQLDKPGERYFICSFIGHC 559 +T G ++L K G+ YFIC+F GHC Sbjct: 58 AKVYTSGRDQIKLPK-GQSYFICNFPGHC 85
>sp|P29602|CPC_CUCSA Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3 Length = 137
Score = 68.9 bits (167), Expect = 2e-11 Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 4/94 (4%) Frame = +2
Query: 290 TVHTVGGDSGWSIMTP---YSAWLQGKTFNVGDSLSFKYEQDWHDVTEV-TKDDYYSCNG 457 TVH VG ++GWS+ + YS W GKTF VGDSL F + + H+V E+ TK + +CN Sbjct: 3 TVHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNF 62
Query: 458 VGPSTINKWTDGATSVQLDKPGERYFICSFIGHC 559 V + T +LD+ G YF+C+ HC Sbjct: 63 VNSDNDVERTSPVIE-RLDELGMHYFVCTVGTHC 95
>sp|P42849|UMEC_ARMRU Umecyanin OS=Armoracia rusticana PE=1 SV=1 Length = 115
Score = 65.1 bits (157), Expect = 3e-10 Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 3/91 (3%) Frame = +2
Query: 296 HTVGGDSGWSIMTP---YSAWLQGKTFNVGDSLSFKYEQDWHDVTEVTKDDYYSCNGVGP 466 + VGGD W + Y W GKTF VGD L F + HDV VTKD + +C P Sbjct: 3 YDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENP 62
Query: 467 STINKWTDGATSVQLDKPGERYFICSFIGHC 559 I+ T + L+ G +Y+IC+ HC Sbjct: 63 --ISHMTTPPVKIMLNTTGPQYYICTVGDHC 91
>sp|O80517|BCB2_ARATH Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1 Length = 202
Score = 64.7 bits (156), Expect = 4e-10 Identities = 35/80 (43%), Positives = 40/80 (50%) Frame = +2
Query: 320 WSIMTPYSAWLQGKTFNVGDSLSFKYEQDWHDVTEVTKDDYYSCNGVGPSTINKWTDGAT 499 W+ YS W GKTF VGD L FKY H V V K Y C+ S+ +DG T Sbjct: 36 WTTGVDYSGWATGKTFRVGDILEFKYGSS-HTVDVVDKAGYDGCD--ASSSTENHSDGDT 92
Query: 500 SVQLDKPGERYFICSFIGHC 559 + L G YFICS GHC Sbjct: 93 KIDLKTVGINYFICSTPGHC 112
>sp|P60496|BABL_LILLO Chemocyanin OS=Lilium longiflorum PE=1 SV=1 Length = 126
Score = 64.3 bits (155), Expect = 5e-10 Identities = 38/89 (42%), Positives = 44/89 (49%) Frame = +2
Query: 293 VHTVGGDSGWSIMTPYSAWLQGKTFNVGDSLSFKYEQDWHDVTEVTKDDYYSCNGVGPST 472 V+TVG GW+ T S W GKTF GD L FKY H+V V Y SC S Sbjct: 32 VYTVGDGGGWTFGT--SGWPAGKTFRAGDVLVFKYNPAVHNVVSVPAGGYKSCTASPGSR 89
Query: 473 INKWTDGATSVQLDKPGERYFICSFIGHC 559 + K G + L + G YFICS GHC Sbjct: 90 VFK--SGDDRITLSR-GTNYFICSVPGHC 115
>sp|Q07488|BCB1_ARATH Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2 Length = 196
Score = 58.5 bits (140), Expect = 3e-08 Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 3/91 (3%) Frame = +2
Query: 296 HTVGGDSGWSI-MTP--YSAWLQGKTFNVGDSLSFKYEQDWHDVTEVTKDDYYSCNGVGP 466 + VG D+ W+ M P Y+ W GKTF VGD L F + HDV V++ + +C P Sbjct: 25 YDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEKEKP 84
Query: 467 STINKWTDGATSVQLDKPGERYFICSFIGHC 559 I+ T + L+ G +YFIC+ HC Sbjct: 85 --ISHMTVPPVKIMLNTTGPQYFICTVGDHC 113
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7XU99 |
Definition |
tr|Q7XU99|Q7XU99_ORYSA OSJNBa0079A21.7 protein OS=Oryza sativa |
Align length |
88 |
Score (bit) |
92.0 |
E-value |
3.0e-17 |
Report |
|