DK961774
Clone id TST39A01NGRL0011_B08
Library
Length 673
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_B08. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
ATACTGACCACCTCCTCCTGGTCCCCGCCTAGAAGAGTTGCCTGCTGTGAGGAGACTGAG
CCATGGCAGCCAGCACAGCCTCCCTCTCATCTGCGACATTCAGTGGGCAGCAGCTGAATC
CCGTGAATGAATTATCACGCAAGGTGGGAGCCGGTGAGGCTCGCGTGCAGATGATGGCAC
CCAAGAAGGCCTCTTCCTCCGGCAGCATCTGGTATGGCGCCGACCGTCCCCTGTACCTGG
GCCCTTTCTCCGGCAGCCCACCGTCGTACTTGACGGGAGAATTCCCTGGAGACTACGGCT
GGGACACCGCTGGGCTGTCGGCGGATCCAGAGACCTTCGCAAAGAACCGGGAGCTGGAGG
TTATCCACTCCAGGTGGGCAATGCTGGGCGCTCTTGGATGCGTCACCCCTGAACTTCTGG
CCAAGAACGGCGTCAAGTTTGGAGAGGCCGTATGGTTCAAGGCGGGCTCACAAATCTTCG
CAGATGGGGGCCTCGACTACCTGGGTAATCCCAGCCTGGTGCACGCTCAAAGCATCCTAG
CCATCTGGGCCTGCCAGGTCATCCTCATGGGCGCCGTGGAGGGCTACCGCGTTGCAGGCG
GGCCCCTGGGTGAGGTGGAGGACCCCATTTACCCGGGCGGCTCCTTCGACCCCTTGGGTC
TGGCCGACGACCC
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 189
Score (bit) 379.0
E-value 1.0e-105
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961774|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_B08, 5'
(673 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 379 e-105
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast... 323 7e-88
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl... 319 7e-87
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop... 318 1e-86
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl... 317 4e-86
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas... 317 5e-86
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl... 315 1e-85
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty... 315 2e-85
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 313 5e-85
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 313 7e-85
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 312 1e-84
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb... 311 2e-84
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas... 311 2e-84
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 311 3e-84
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 310 3e-84
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 310 3e-84
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 310 3e-84
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop... 310 4e-84
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas... 310 6e-84
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl... 310 6e-84
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas... 309 8e-84
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 308 1e-83
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 308 1e-83
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 308 1e-83
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl... 308 1e-83
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 307 3e-83
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas... 307 3e-83
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 307 4e-83
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 306 8e-83
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas... 305 1e-82

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
SV=1
Length = 265

Score = 379 bits (973), Expect = e-105
Identities = 181/189 (95%), Positives = 185/189 (97%)
Frame = +3

Query: 105 GQQLNPVNELSRKVGAGEARVQMMAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEF 284
GQQL PVNELSRKVGAGEARVQMMAPK + SGSIWYG+DRPLYLGPFSGSPPSYL+GEF
Sbjct: 14 GQQLKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEF 73

Query: 285 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKA 464
PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKA
Sbjct: 74 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKA 133

Query: 465 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGS 644
GSQIFA+GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGS
Sbjct: 134 GSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGS 193

Query: 645 FDPLGLADD 671
FDPLGLADD
Sbjct: 194 FDPLGLADD 202


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
OS=Physcomitrella patens PE=3 SV=1
Length = 269

Score = 323 bits (827), Expect = 7e-88
Identities = 159/192 (82%), Positives = 172/192 (89%), Gaps = 3/192 (1%)
Frame = +3

Query: 105 GQQL-NPVNELSRKV-GAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLT 275
GQ L PVNELSRKV G EARV M K++ S +IWYGADRP +LGPFSG PSYL
Sbjct: 14 GQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLN 73

Query: 276 GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVW 455
GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 456 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 635
FKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 193

Query: 636 GGSFDPLGLADD 671
GGSFDPLGLADD
Sbjct: 194 GGSFDPLGLADD 205



Score = 31.2 bits (69), Expect = 5.2
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +3

Query: 249 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKN 428
+G P +T +D GL+ DP+TFA+ + E+ + R AM G ++
Sbjct: 180 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239

Query: 429 G 431
G
Sbjct: 240 G 240


>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1,
chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R
PE=2 SV=2
Length = 265

Score = 319 bits (818), Expect = 7e-87
Identities = 152/177 (85%), Positives = 162/177 (91%), Gaps = 4/177 (2%)
Frame = +3

Query: 153 GEARVQMMA----PKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 320
GEAR+ M PK A+SSGS WYGADR LYLGP SG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 26 GEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 321 ADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDY 500
ADPETFAKNRELEVIHSRWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDY
Sbjct: 86 ADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 501 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADD 671
LGNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGPLGEV DP+YPGG+FDPLGLADD
Sbjct: 146 LGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADD 202


>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9,
chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1
Length = 265

Score = 318 bits (816), Expect = 1e-86
Identities = 152/177 (85%), Positives = 161/177 (90%), Gaps = 4/177 (2%)
Frame = +3

Query: 153 GEARVQMMAP----KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 320
GEARV M K A+SSGS WYG DR LYLGP SG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 26 GEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 321 ADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDY 500
ADPETFAKNRELEVIHSRWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDY
Sbjct: 86 ADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 501 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADD 671
LGNPSL+HAQSILAIWACQV+LMGA+EGYRVAGGPLGEV DP+YPGG+FDPLGLADD
Sbjct: 146 LGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYPGGTFDPLGLADD 202


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
Length = 262

Score = 317 bits (812), Expect = 4e-86
Identities = 151/181 (83%), Positives = 164/181 (90%), Gaps = 4/181 (2%)
Frame = +3

Query: 141 KVGA-GEARVQM---MAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDT 308
KVG+ GE R+ M + K ++SGS WYG DR YLGPFSG PPSYLTGEFPGDYGWDT
Sbjct: 19 KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 309 AGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADG 488
AGLSADPETFAKNRELEVIHSRWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF++G
Sbjct: 79 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 489 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLAD 668
GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLAD
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAD 198

Query: 669 D 671
D
Sbjct: 199 D 199


>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic
OS=Zea mays PE=2 SV=1
Length = 265

Score = 317 bits (811), Expect = 5e-86
Identities = 151/177 (85%), Positives = 160/177 (90%), Gaps = 4/177 (2%)
Frame = +3

Query: 153 GEARVQMMAP----KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 320
GEARV M K A++SGS WYG DR LYLGP SG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 26 GEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 321 ADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDY 500
ADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDY
Sbjct: 86 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 501 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADD 671
LGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADD
Sbjct: 146 LGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADD 202


>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2,
chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R
PE=2 SV=2
Length = 261

Score = 315 bits (807), Expect = 1e-85
Identities = 150/176 (85%), Positives = 160/176 (90%), Gaps = 3/176 (1%)
Frame = +3

Query: 153 GEARVQMM---APKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSA 323
GE R+ M A K ++SGS WYGADR LYLGP SG PPSYLTGEFPGDYGWDTAGLSA
Sbjct: 23 GEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 82

Query: 324 DPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYL 503
DPETFAKNRELEVIHSRWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDYL
Sbjct: 83 DPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 142

Query: 504 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADD 671
GNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADD
Sbjct: 143 GNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADD 198


>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type
I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255

Score = 315 bits (806), Expect = 2e-85
Identities = 150/174 (86%), Positives = 158/174 (90%), Gaps = 1/174 (0%)
Frame = +3

Query: 153 GEARVQMM-APKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADP 329
G A+ M K+ SSGS WYG DR YLGPFSG PPSYLTGEFPGDYGWDTAGLSADP
Sbjct: 19 GNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 78

Query: 330 ETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGN 509
ETFAKNRELEVIHSRWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF++GGLDYLGN
Sbjct: 79 ETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN 138

Query: 510 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADD 671
PSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPIYPGGSFDPLGLADD
Sbjct: 139 PSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADD 192


>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80,
chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1
Length = 269

Score = 313 bits (802), Expect = 5e-85
Identities = 153/190 (80%), Positives = 168/190 (88%), Gaps = 1/190 (0%)
Frame = +3

Query: 105 GQQLNPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGE 281
G+QL +N S+++GA ++ A KK +SSGS WYG DR YLGPFSG PSYLTGE
Sbjct: 18 GKQLK-LNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGE 76

Query: 282 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFK 461
FPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCV PELL++NGVKFGEAVWFK
Sbjct: 77 FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 136

Query: 462 AGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 641
AGSQIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYR+AGGPLGEV DP+YPGG
Sbjct: 137 AGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 196

Query: 642 SFDPLGLADD 671
SFDPLGLADD
Sbjct: 197 SFDPLGLADD 206


>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member
1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1
Length = 274

Score = 313 bits (801), Expect = 7e-85
Identities = 153/177 (86%), Positives = 160/177 (90%), Gaps = 4/177 (2%)
Frame = +3

Query: 153 GEARVQMM--APKK--ASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 320
GEARV M KK AS+S S WYG DR LYLGPFSG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 35 GEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 94

Query: 321 ADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDY 500
ADPE FAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAG+QIF++GGLDY
Sbjct: 95 ADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDY 154

Query: 501 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADD 671
LGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DPIYPGGSFDPLGLA+D
Sbjct: 155 LGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAED 211



Score = 30.8 bits (68), Expect = 6.8
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3

Query: 249 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKN 428
+G P +T +D GL+ DPE FA+ + E+ + R AM G ++
Sbjct: 186 AGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 245

Query: 429 G 431
G
Sbjct: 246 G 246


tr_hit_id A9TL35
Definition tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 186
Score (bit) 337.0
E-value 4.0e-91
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961774|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_B08, 5'
(673 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten... 337 4e-91
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ... 333 6e-90
tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten... 333 8e-90
tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten... 331 2e-89
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco... 331 3e-89
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten... 331 3e-89
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten... 331 3e-89
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten... 331 3e-89
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten... 328 1e-88
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten... 328 1e-88
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten... 328 2e-88
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ... 326 7e-88
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten... 326 7e-88
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten... 322 1e-86
tr|A9SGM1|A9SGM1_PHYPA Predicted protein OS=Physcomitrella paten... 322 1e-86
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor... 322 2e-86
tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiant... 321 3e-86
tr|Q4VV47|Q4VV47_PICSI Chloroplast light harvesting chlorophyll ... 320 5e-86
tr|Q40770|Q40770_PICAB Light harvesting chlorophyll a /b-binding... 320 5e-86
tr|B4FUA1|B4FUA1_MAIZE Chlorophyll a-b binding protein 1 OS=Zea ... 320 5e-86
tr|A9NK15|A9NK15_PICSI Putative uncharacterized protein OS=Picea... 320 5e-86
tr|Q4VV55|Q4VV55_9CONI Chloroplast light harvesting chlorophyll ... 319 9e-86
tr|Q4VV54|Q4VV54_PINLA Chloroplast light harvesting chlorophyll ... 319 9e-86
tr|Q4VV53|Q4VV53_PINMO Chloroplast light harvesting chlorophyll ... 319 9e-86
tr|Q4VV52|Q4VV52_PINST Chloroplast light harvesting chlorophyll ... 319 9e-86
tr|Q40771|Q40771_PICAB Light harvesting chlorophyll a /b-binding... 319 9e-86
tr|Q0J2G2|Q0J2G2_ORYSJ Os09g0346500 protein OS=Oryza sativa subs... 319 9e-86
tr|B8BEP6|B8BEP6_ORYSI Putative uncharacterized protein OS=Oryza... 319 9e-86
tr|B6T2Y9|B6T2Y9_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 319 9e-86
tr|Q8W0E6|Q8W0E6_ORYSJ cDNA clone:001-013-E06, full insert seque... 319 1e-85

>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
Length = 263

Score = 337 bits (864), Expect = 4e-91
Identities = 162/186 (87%), Positives = 171/186 (91%)
Frame = +3

Query: 114 LNPVNELSRKVGAGEARVQMMAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGD 293
L PVNELSRKVG EARV M +K+S S SIWYGADRP +LGPFSG PSYL GEF GD
Sbjct: 18 LKPVNELSRKVGTSEARVSM---RKSSGSDSIWYGADRPKFLGPFSGETPSYLNGEFAGD 74

Query: 294 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 473
YGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAG+Q
Sbjct: 75 YGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGAQ 134

Query: 474 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 653
IF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYPGGSFDP
Sbjct: 135 IFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDP 194

Query: 654 LGLADD 671
LGLADD
Sbjct: 195 LGLADD 200


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
protein 2 (Predicted protein) OS=Physcomitrella patens
subsp. patens GN=PpLhcb2 PE=4 SV=1
Length = 267

Score = 333 bits (854), Expect = 6e-90
Identities = 160/187 (85%), Positives = 171/187 (91%), Gaps = 1/187 (0%)
Frame = +3

Query: 114 LNPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPG 290
L PVNELSRKVG+ +ARV M K++ S SIWYGADRP YLGPFSG PSYL GEF G
Sbjct: 18 LKPVNELSRKVGSSQARVTMRRTVNKSAGSDSIWYGADRPKYLGPFSGETPSYLNGEFAG 77

Query: 291 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS 470
DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK+GVKFGEAVWFKAG+
Sbjct: 78 DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVWFKAGA 137

Query: 471 QIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD 650
QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYPGGSFD
Sbjct: 138 QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFD 197

Query: 651 PLGLADD 671
PLGLADD
Sbjct: 198 PLGLADD 204


>tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_220036 PE=4 SV=1
Length = 263

Score = 333 bits (853), Expect = 8e-90
Identities = 159/186 (85%), Positives = 172/186 (92%)
Frame = +3

Query: 114 LNPVNELSRKVGAGEARVQMMAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGD 293
L PVNELSR+VGA EARV M +K++ S SIWYGADRP +LGPFSG PSYL GEF GD
Sbjct: 18 LKPVNELSRRVGANEARVTM---RKSAGSDSIWYGADRPKFLGPFSGETPSYLNGEFAGD 74

Query: 294 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 473
YGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+Q
Sbjct: 75 YGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQ 134

Query: 474 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 653
IF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYPGGSFDP
Sbjct: 135 IFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDP 194

Query: 654 LGLADD 671
LGLADD
Sbjct: 195 LGLADD 200


>tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_209208 PE=4 SV=1
Length = 263

Score = 331 bits (849), Expect = 2e-89
Identities = 162/186 (87%), Positives = 170/186 (91%)
Frame = +3

Query: 114 LNPVNELSRKVGAGEARVQMMAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGD 293
L +NELSRKVG +ARV M +KASSS SIWYGADRP YLGP SG PSYLTGEF GD
Sbjct: 18 LKSINELSRKVGNVQARVTM---RKASSSDSIWYGADRPKYLGPLSGETPSYLTGEFAGD 74

Query: 294 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 473
YGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ
Sbjct: 75 YGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 134

Query: 474 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 653
IF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLGEV DPIYPGGSFDP
Sbjct: 135 IFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDP 194

Query: 654 LGLADD 671
LGLADD
Sbjct: 195 LGLADD 200


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
OS=Physcomitrella patens PE=2 SV=1
Length = 268

Score = 331 bits (848), Expect = 3e-89
Identities = 159/187 (85%), Positives = 171/187 (91%), Gaps = 1/187 (0%)
Frame = +3

Query: 114 LNPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPG 290
L PV+ELSRKV AGEARV M K+S S SIWYGADRP +LGPFSG PSYL GEF G
Sbjct: 19 LKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLNGEFAG 78

Query: 291 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS 470
DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+
Sbjct: 79 DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGA 138

Query: 471 QIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD 650
QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYPGGSFD
Sbjct: 139 QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFD 198

Query: 651 PLGLADD 671
PLGLADD
Sbjct: 199 PLGLADD 205


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
Length = 268

Score = 331 bits (848), Expect = 3e-89
Identities = 159/187 (85%), Positives = 171/187 (91%), Gaps = 1/187 (0%)
Frame = +3

Query: 114 LNPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPG 290
L PV+ELSRKV AGEARV M K+S S SIWYGADRP +LGPFSG PSYL GEF G
Sbjct: 19 LKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLNGEFAG 78

Query: 291 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS 470
DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+
Sbjct: 79 DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGA 138

Query: 471 QIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD 650
QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYPGGSFD
Sbjct: 139 QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFD 198

Query: 651 PLGLADD 671
PLGLADD
Sbjct: 199 PLGLADD 205


>tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_105126 PE=4 SV=1
Length = 265

Score = 331 bits (848), Expect = 3e-89
Identities = 159/186 (85%), Positives = 171/186 (91%)
Frame = +3

Query: 114 LNPVNELSRKVGAGEARVQMMAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGD 293
L PVNELSRKVG+ EARV M K S+S SIWYGADRP YLGPFSG PSYLTGEF GD
Sbjct: 18 LKPVNELSRKVGSSEARVTMRRTVK-STSDSIWYGADRPKYLGPFSGETPSYLTGEFAGD 76

Query: 294 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 473
YGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+Q
Sbjct: 77 YGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQ 136

Query: 474 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 653
IF++GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRVAGGPLGE+ DPIYPGGSFDP
Sbjct: 137 IFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRVAGGPLGEITDPIYPGGSFDP 196

Query: 654 LGLADD 671
LGLADD
Sbjct: 197 LGLADD 202


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
Length = 267

Score = 331 bits (848), Expect = 3e-89
Identities = 159/187 (85%), Positives = 171/187 (91%), Gaps = 1/187 (0%)
Frame = +3

Query: 114 LNPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPG 290
L PVNELSRKVG EARV M K++ S SIWYGADRP +LGPFSG PSYLTGEF G
Sbjct: 18 LKPVNELSRKVGNVEARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLTGEFAG 77

Query: 291 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS 470
DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+
Sbjct: 78 DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGA 137

Query: 471 QIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD 650
QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYPGGSFD
Sbjct: 138 QIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFD 197

Query: 651 PLGLADD 671
PLGLADD
Sbjct: 198 PLGLADD 204


>tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_124625 PE=4 SV=1
Length = 267

Score = 328 bits (842), Expect = 1e-88
Identities = 160/191 (83%), Positives = 172/191 (90%), Gaps = 2/191 (1%)
Frame = +3

Query: 105 GQQL-NPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTG 278
GQ L PVNELSRKVG EARV M K++ S SIWYGADRP +LGPFSG PSYL G
Sbjct: 14 GQSLVKPVNELSRKVGNVEARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLNG 73

Query: 279 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWF 458
EF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWF
Sbjct: 74 EFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWF 133

Query: 459 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPG 638
KAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYPG
Sbjct: 134 KAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPG 193

Query: 639 GSFDPLGLADD 671
GSFDPLGLADD
Sbjct: 194 GSFDPLGLADD 204


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
Length = 267

Score = 328 bits (842), Expect = 1e-88
Identities = 159/187 (85%), Positives = 171/187 (91%), Gaps = 1/187 (0%)
Frame = +3

Query: 114 LNPVNELSRKVGAGEARVQMM-APKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPG 290
L PVNELSRKVG EARV M + K+++S SIWYGADRP YLGPFSG PSYL GEF G
Sbjct: 18 LKPVNELSRKVGNVEARVSMRKSASKSAASDSIWYGADRPKYLGPFSGETPSYLNGEFAG 77

Query: 291 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS 470
DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK+GVKFGEAVWFKAG+
Sbjct: 78 DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVWFKAGA 137

Query: 471 QIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD 650
QIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIYPGGSFD
Sbjct: 138 QIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFD 197

Query: 651 PLGLADD 671
PLGLADD
Sbjct: 198 PLGLADD 204