DK961762 |
Clone id |
TST39A01NGRL0011_A20 |
Library |
TST39 |
Length |
585 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_A20. 5' end sequence. |
Accession |
DK961762 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CCCTGAGGCTCTTGATACCTTCCTTGGAACTTTGGCAGCAGGAAATGCAGAGAATGAAAA AAAGTTGCCGAGAGGCGACCAAGTCATTGCGCCTGGTATGGCTGTTCACAAATACATTGA GTGCGACAACTGTTTTGTGTGTCCTATTGTGGGCCCTCGGTACAAATCCATCACAAAAGA TGACTACGATCTGTGTTCAAATTGTGTCAATAAGGTTGGAAATCCCATGGATTACCGCAA GTTGGACCGCCCTTTGATTGTTGTTCCCCCTAATCTTGATGCGTCTTTGAAGGGTGCAAA TGATCAATGCTCTTTTACTTCTCCATGCAGAATACTTTCATCCCGAGGCCCTTTTGGGCG GGTTTCTCCGAAACCTGATTGTGTTTTTAAGGATTTGAAGGGCATTGAGAGCCCCTTAGA TGCTGAATTTGTGAAGGATGTCACCATCCTGGATGGTTCAAAAGTAGAAGTCGACTCTAC CTTTACAAAGGTTTGGCGACTCAGGAATTGCGGAGCGCATCCATGGCCTGAGCATACAAA GCTTATTCATATTGGAGGAAACATGCTTGGTTCCGGTGGTTTTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9P792 |
Definition |
sp|Q9P792|YN8B_SCHPO ZZ-type zinc finger-containing protein P35G2.11c OS=Schizosaccharomyces pombe |
Align length |
158 |
Score (bit) |
57.8 |
E-value |
4.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6ZH84 |
Definition |
tr|Q6ZH84|Q6ZH84_ORYSJ Os02g0593700 protein OS=Oryza sativa subsp. japonica |
Align length |
158 |
Score (bit) |
116.0 |
E-value |
1.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961762|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_A20, 5' (585 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6ZH84|Q6ZH84_ORYSJ Os02g0593700 protein OS=Oryza sativa subs... 116 1e-24 tr|A2X6P6|A2X6P6_ORYSI Putative uncharacterized protein OS=Oryza... 116 1e-24 tr|B8K1X5|B8K1X5_WHEAT Ubiquitin-associated protein OS=Triticum ... 114 5e-24 tr|Q9SB64|Q9SB64_ARATH Putative uncharacterized protein AT4g2469... 109 1e-22 tr|A9SHX9|A9SHX9_PHYPA Predicted protein OS=Physcomitrella paten... 108 2e-22 tr|Q7XK43|Q7XK43_ORYSJ Os04g0476800 protein OS=Oryza sativa subs... 101 3e-20 tr|Q01JY6|Q01JY6_ORYSA OSIGBa0116M22.2 protein OS=Oryza sativa G... 96 1e-18 tr|B8AVG3|B8AVG3_ORYSI Putative uncharacterized protein OS=Oryza... 96 1e-18 tr|Q55CE3|Q55CE3_DICDI ZZ-type Zn finger-containing protein OS=D... 63 1e-08 tr|Q0ZII2|Q0ZII2_NICPL Joka2 (Fragment) OS=Nicotiana plumbaginif... 62 3e-08 tr|B6N0H7|B6N0H7_BRAFL Putative uncharacterized protein OS=Branc... 60 9e-08 tr|Q8H2A7|Q8H2A7_ANACO PFE18 protein (Fragment) OS=Ananas comosu... 59 2e-07 tr|Q1E5W8|Q1E5W8_COCIM Putative uncharacterized protein OS=Cocci... 55 3e-06 tr|Q0U8L7|Q0U8L7_PHANO Putative uncharacterized protein OS=Phaeo... 55 3e-06 tr|Q4S5P4|Q4S5P4_TETNG Chromosome 9 SCAF14729, whole genome shot... 54 6e-06 tr|Q4RIE8|Q4RIE8_TETNG Chromosome 11 SCAF15043, whole genome sho... 54 8e-06 tr|Q3KQ90|Q3KQ90_XENLA MGC130859 protein OS=Xenopus laevis GN=MG... 52 2e-05 tr|B2GU69|B2GU69_XENTR C6orf106 protein OS=Xenopus tropicalis GN... 52 2e-05 tr|A8N2V5|A8N2V5_COPC7 Putative uncharacterized protein OS=Copri... 52 2e-05 tr|B6LDN5|B6LDN5_BRAFL Putative uncharacterized protein OS=Branc... 52 2e-05 tr|B3RLV0|B3RLV0_TRIAD Putative uncharacterized protein OS=Trich... 52 2e-05 tr|B2VRI5|B2VRI5_PYRTR Putative uncharacterized protein OS=Pyren... 52 2e-05 tr|A4RUF1|A4RUF1_OSTLU Predicted protein OS=Ostreococcus lucimar... 51 4e-05 tr|Q5TH58|Q5TH58_HUMAN Novel protein OS=Homo sapiens GN=RP3-391O... 51 4e-05 tr|B2R8K7|B2R8K7_HUMAN cDNA, FLJ93948 (Chromosome 6 open reading... 51 4e-05 tr|Q2M1K7|Q2M1K7_RAT Similar to chromosome 6 open reading frame ... 51 5e-05 tr|B2KF54|B2KF54_MOUSE Novel protein OS=Mus musculus GN=D17Wsu92... 51 5e-05 tr|B2KF52|B2KF52_MOUSE Novel protein OS=Mus musculus GN=RP24-535... 51 5e-05 tr|A2RT11|A2RT11_MOUSE DNA segment, Chr 17, Wayne State Universi... 51 5e-05 tr|Q2T9R7|Q2T9R7_BOVIN Putative uncharacterized protein C6orf106... 51 5e-05
>tr|Q6ZH84|Q6ZH84_ORYSJ Os02g0593700 protein OS=Oryza sativa subsp. japonica GN=OJ1067_B01.6-1 PE=2 SV=1 Length = 845
Score = 116 bits (290), Expect = 1e-24 Identities = 59/158 (37%), Positives = 89/158 (56%) Frame = +2
Query: 89 APGMAVHKYIECDNCFVCPIVGPRYKSITKDDYDLCSNCVNKVGNPMDYRKLDRPLIVVP 268 +P H++I+CD C V PIVGPRYKS TK+DYDLC C +++GN ++Y ++D+PL+ Sbjct: 419 SPARTFHRWIQCDGCGVQPIVGPRYKSKTKEDYDLCDACFHRMGNEVEYTRIDKPLLPQR 478
Query: 269 PNLDASLKGANDQCSFTSPCRILSSRGPFGRVSPKPDCVFKDLKGIESPLDAEFVKDVTI 448 D +L CR + SR +K L++ F+ DVT+ Sbjct: 479 LLRDPTL------------CRKIHSRAA--------------MKSKREKLESRFILDVTV 512
Query: 449 LDGSKVEVDSTFTKVWRLRNCGAHPWPEHTKLIHIGGN 562 LDG+ + + FTK+WR+ N G+ WP T+LI +GG+ Sbjct: 513 LDGTLMAPSTPFTKIWRMHNNGSIMWPLGTQLIWVGGD 550
>tr|A2X6P6|A2X6P6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07886 PE=4 SV=1 Length = 845
Score = 116 bits (290), Expect = 1e-24 Identities = 59/158 (37%), Positives = 89/158 (56%) Frame = +2
Query: 89 APGMAVHKYIECDNCFVCPIVGPRYKSITKDDYDLCSNCVNKVGNPMDYRKLDRPLIVVP 268 +P H++I+CD C V PIVGPRYKS TK+DYDLC C +++GN ++Y ++D+PL+ Sbjct: 419 SPARTFHRWIQCDGCGVQPIVGPRYKSKTKEDYDLCDACFHRMGNEVEYTRIDKPLLPQR 478
Query: 269 PNLDASLKGANDQCSFTSPCRILSSRGPFGRVSPKPDCVFKDLKGIESPLDAEFVKDVTI 448 D +L CR + SR +K L++ F+ DVT+ Sbjct: 479 LLRDPTL------------CRKIHSRAA--------------MKSKREKLESRFILDVTV 512
Query: 449 LDGSKVEVDSTFTKVWRLRNCGAHPWPEHTKLIHIGGN 562 LDG+ + + FTK+WR+ N G+ WP T+LI +GG+ Sbjct: 513 LDGTLMAPSTPFTKIWRMHNNGSIMWPLGTQLIWVGGD 550
>tr|B8K1X5|B8K1X5_WHEAT Ubiquitin-associated protein OS=Triticum aestivum GN=UBA PE=2 SV=1 Length = 870
Score = 114 bits (284), Expect = 5e-24 Identities = 57/152 (37%), Positives = 86/152 (56%) Frame = +2
Query: 107 HKYIECDNCFVCPIVGPRYKSITKDDYDLCSNCVNKVGNPMDYRKLDRPLIVVPPNLDAS 286 H++I+CD C V PIVGPRYKS K+DYDLC C ++G+ ++Y ++D+P++ + D + Sbjct: 435 HRWIQCDGCGVQPIVGPRYKSNVKEDYDLCDTCFCRMGSEVEYTRIDKPILPHKLSRDPN 494
Query: 287 LKGANDQCSFTSPCRILSSRGPFGRVSPKPDCVFKDLKGIESPLDAEFVKDVTILDGSKV 466 L CR + SR P +K L++ F+ DVT+LDG+ + Sbjct: 495 L------------CRKIHSRAP--------------MKSKREKLESRFILDVTVLDGTLM 528
Query: 467 EVDSTFTKVWRLRNCGAHPWPEHTKLIHIGGN 562 S FTK+WR+ N G WP T+LI +GG+ Sbjct: 529 SPSSPFTKIWRMHNNGXIMWPLGTQLIWVGGD 560
>tr|Q9SB64|Q9SB64_ARATH Putative uncharacterized protein AT4g24690 OS=Arabidopsis thaliana GN=F22K18.110 PE=2 SV=1 Length = 704
Score = 109 bits (273), Expect = 1e-22 Identities = 63/172 (36%), Positives = 92/172 (53%), Gaps = 2/172 (1%) Frame = +2
Query: 53 NEKKLPRGDQVIAPGMAVHKYIECDNCFVCPIVGPRYKSITKDDYDLCSNCVNKVGNPMD 232 + KK GD + G+ HK I CD C V PI GPR+KS K+DYDLC+ C + +GN D Sbjct: 269 HSKKSTNGDYWTSLGV-FHKGIRCDGCGVLPITGPRFKSKVKEDYDLCTICYSVMGNEGD 327
Query: 233 YRKLDRPLIV--VPPNLDASLKGANDQCSFTSPCRILSSRGPFGRVSPKPDCVFKDLKGI 406 Y ++D+P+ V + P + N S P R + P PK Sbjct: 328 YTRMDKPVSVQHLHPFRGPFTQFPNPWLSHPVP-RATNGGAPLRCTRPK----------- 375
Query: 407 ESPLDAEFVKDVTILDGSKVEVDSTFTKVWRLRNCGAHPWPEHTKLIHIGGN 562 LD+ FV DV ++DG+ V + FTK+W++RN G+ WP+ T+++ IGG+ Sbjct: 376 ---LDSRFVLDVNVIDGTVVAPSAPFTKIWKMRNSGSLVWPQGTQIVWIGGD 424
>tr|A9SHX9|A9SHX9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_212537 PE=4 SV=1 Length = 732
Score = 108 bits (270), Expect = 2e-22 Identities = 66/170 (38%), Positives = 87/170 (51%), Gaps = 15/170 (8%) Frame = +2
Query: 107 HKYIECDNCFVCPIVGPRYKSITKDDYDLCSNCVNKVGNPMDYRKLDRPLIVVPPNLDAS 286 H ++CD C + PIVG RYKS K DYDLC C + G DY +++RP I P L+ Sbjct: 236 HVGVQCDVCGMVPIVGSRYKSNKKHDYDLCQQCFQECGKIEDYTQIERP-IWRPNFLNPQ 294
Query: 287 LKGANDQCSFTSPCR---ILSSRGPF-----------GRVSPKPDCVFKDLKG-IESPLD 421 +C P + RGP G + D G + LD Sbjct: 295 FGRGRMRCPAFFPHGGRPFFNGRGPHMHGPDAFHGFHGSHGHRSDLRCGGAFGPVGGKLD 354
Query: 422 AEFVKDVTILDGSKVEVDSTFTKVWRLRNCGAHPWPEHTKLIHIGGNMLG 571 A FV+DVTI DG++ + FTK+WRLRN G+ WP+ TKLIH+GG+ LG Sbjct: 355 ARFVQDVTIFDGTEFAPGTAFTKIWRLRNSGSCAWPKSTKLIHVGGDDLG 404
>tr|Q7XK43|Q7XK43_ORYSJ Os04g0476800 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0044K18.2 PE=4 SV=1 Length = 881
Score = 101 bits (252), Expect = 3e-20 Identities = 56/155 (36%), Positives = 82/155 (52%), Gaps = 1/155 (0%) Frame = +2
Query: 104 VHKYIECDNCFVCPIVGPRYKSITKDDYDLCSNCVNKVGNPMDYRKLDRPLIVVPPNLDA 283 +H++I+CD C V PI G RYKS KDDYDLC+ C +++GN +Y ++DRP Sbjct: 459 LHRWIQCDGCGVTPIAGSRYKSNIKDDYDLCNTCFSRMGNVNEYTRIDRP---------- 508
Query: 284 SLKGANDQCSFTS-PCRILSSRGPFGRVSPKPDCVFKDLKGIESPLDAEFVKDVTILDGS 460 SF S CR L+ +F L+ + D F+KDVT+ DG+ Sbjct: 509 ---------SFGSRRCRDLNQN----------QMLFPHLRQLH---DCRFIKDVTVPDGT 546
Query: 461 KVEVDSTFTKVWRLRNCGAHPWPEHTKLIHIGGNM 565 + + FTK+WR+ N G+ WP T L +GG++ Sbjct: 547 VMAPSTPFTKIWRIHNNGSSMWPYGTCLTWVGGHL 581
>tr|Q01JY6|Q01JY6_ORYSA OSIGBa0116M22.2 protein OS=Oryza sativa GN=OSIGBa0116M22.2 PE=4 SV=1 Length = 881
Score = 95.9 bits (237), Expect = 1e-18 Identities = 54/155 (34%), Positives = 82/155 (52%), Gaps = 1/155 (0%) Frame = +2
Query: 104 VHKYIECDNCFVCPIVGPRYKSITKDDYDLCSNCVNKVGNPMDYRKLDRPLIVVPPNLDA 283 +H++++CD+C V PI G RYKS KDDYDLCS C +++GN +Y ++DRP Sbjct: 459 LHRWMQCDDCGVTPIAGSRYKSNIKDDYDLCSTCFSRMGNVNEYTRIDRP---------- 508
Query: 284 SLKGANDQCSFTS-PCRILSSRGPFGRVSPKPDCVFKDLKGIESPLDAEFVKDVTILDGS 460 SF S R L+ +F L+ + D F+KD+T+ DG+ Sbjct: 509 ---------SFGSRRFRDLNQN----------QMLFPHLRQLH---DCCFIKDITVPDGT 546
Query: 461 KVEVDSTFTKVWRLRNCGAHPWPEHTKLIHIGGNM 565 + + FTK+WR+ N G+ WP T L +GG++ Sbjct: 547 VMAPSTPFTKIWRIHNNGSSMWPYGTCLTWVGGHL 581
>tr|B8AVG3|B8AVG3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16310 PE=4 SV=1 Length = 881
Score = 95.9 bits (237), Expect = 1e-18 Identities = 54/155 (34%), Positives = 82/155 (52%), Gaps = 1/155 (0%) Frame = +2
Query: 104 VHKYIECDNCFVCPIVGPRYKSITKDDYDLCSNCVNKVGNPMDYRKLDRPLIVVPPNLDA 283 +H++++CD+C V PI G RYKS KDDYDLCS C +++GN +Y ++DRP Sbjct: 459 LHRWMQCDDCGVTPIAGSRYKSNIKDDYDLCSTCFSRMGNVNEYTRIDRP---------- 508
Query: 284 SLKGANDQCSFTS-PCRILSSRGPFGRVSPKPDCVFKDLKGIESPLDAEFVKDVTILDGS 460 SF S R L+ +F L+ + D F+KD+T+ DG+ Sbjct: 509 ---------SFGSRRFRDLNQN----------QMLFPHLRQLH---DCCFIKDITVPDGT 546
Query: 461 KVEVDSTFTKVWRLRNCGAHPWPEHTKLIHIGGNM 565 + + FTK+WR+ N G+ WP T L +GG++ Sbjct: 547 VMAPSTPFTKIWRIHNNGSSMWPYGTCLTWVGGHL 581
>tr|Q55CE3|Q55CE3_DICDI ZZ-type Zn finger-containing protein OS=Dictyostelium discoideum GN=DDB_0190801 PE=1 SV=1 Length = 646
Score = 62.8 bits (151), Expect = 1e-08 Identities = 48/155 (30%), Positives = 66/155 (42%) Frame = +2
Query: 98 MAVHKYIECDNCFVCPIVGPRYKSITKDDYDLCSNCVNKVGNPMDYRKLDRPLIVVPPNL 277 M H I CD C + G RYK DYDLCS C ++ G+ + I P + Sbjct: 244 MVEHVGITCDGCD-SKVFGNRYKCTVCHDYDLCSECESR-GDQVHPTSHPLLKIAQPTPI 301
Query: 278 DASLKGANDQCSFTSPCRILSSRGPFGRVSPKPDCVFKDLKGIESPLDAEFVKDVTILDG 457 S + +N S P G F + A ++ D++I DG Sbjct: 302 SCSWQHSNAGRSGI----------PHG---------FGGGRCTRKVYAARYLADISIKDG 342
Query: 458 SKVEVDSTFTKVWRLRNCGAHPWPEHTKLIHIGGN 562 S + S+FTK WRLRN G WPE+T L + G+ Sbjct: 343 SVIPKGSSFTKTWRLRNDGKTSWPENTTLSFLSGD 377
>tr|Q0ZII2|Q0ZII2_NICPL Joka2 (Fragment) OS=Nicotiana plumbaginifolia PE=2 SV=1 Length = 467
Score = 61.6 bits (148), Expect = 3e-08 Identities = 26/54 (48%), Positives = 35/54 (64%) Frame = +2
Query: 95 GMAVHKYIECDNCFVCPIVGPRYKSITKDDYDLCSNCVNKVGNPMDYRKLDRPL 256 G H+ + CD C V PI GPR+ S K++YDLC C ++GN DY ++DRPL Sbjct: 412 GTIFHRGVRCDGCGVHPITGPRFISKVKENYDLCIICFAEMGNDADYIRMDRPL 465
|