DK961598 |
Clone id |
TST39A01NGRL0010_J05 |
Library |
TST39 |
Length |
526 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_J05. 5' end sequence. |
Accession |
DK961598 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GTTTGCTTGCTAACCTTCATTCTTGCTCGACTGTGAAGATATAAGCGTGCTATGGGGTAG TTCGACCTCCAATAAGGGTTTCAAGTTAAGTCTCCATGGCCTACCTTCACATGGCATCAT GCCTTTTCTGCTTCGTCCTCGTAGCATGATTGATGGGTTCATCGTGCATCATCAACAGCA CTACACCTAATTCATCTCGGATGTTTGATTGGCACGGAGAGCTATGATATCACCGGACCT GCAGCTGATGTTAATGTGATGGGATATGCGAACCCTTTACAGAATGCAGCAGGCATCCGC ATCCGACTCCGAGCTCGGACCTTCATAGTGGCTGAAAAGAGCAGCACTAATGAATCCATT CAGAATCGTATTGTCTTTGTGAATCTTGATGCTTGCATGGCTTCTCAAGCAGTGACCAAC AAGGTCCTTCAGCGCCTCATGAACAGGTATGGGGACATGTATTCTGAGAAAAATGTGGGT ATTAATGGGACACATACCCACTCTGGGCCTGGTGGTTATTTACAGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q304B9 |
Definition |
sp|Q304B9|NCASE_ARATH Neutral ceramidase OS=Arabidopsis thaliana |
Align length |
107 |
Score (bit) |
146.0 |
E-value |
7.0e-35 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TGT4 |
Definition |
tr|A9TGT4|A9TGT4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
106 |
Score (bit) |
159.0 |
E-value |
6.0e-38 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961598|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0010_J05, 5' (526 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TGT4|A9TGT4_PHYPA Predicted protein OS=Physcomitrella paten... 159 6e-38 tr|Q9LNV7|Q9LNV7_ARATH F22G5.28 OS=Arabidopsis thaliana PE=4 SV=1 144 3e-33 tr|A9RDV4|A9RDV4_PHYPA Predicted protein OS=Physcomitrella paten... 144 3e-33 tr|A7NYM9|A7NYM9_VITVI Chromosome chr6 scaffold_3, whole genome ... 143 5e-33 tr|B7ZZK1|B7ZZK1_MAIZE Putative uncharacterized protein OS=Zea m... 142 1e-32 tr|B5TWK7|B5TWK7_HORVU Neutral ceramidase OS=Hordeum vulgare PE=... 139 9e-32 tr|A9YFM2|A9YFM2_WHEAT Neutral ceramidase OS=Triticum aestivum P... 139 9e-32 tr|Q0JL46|Q0JL46_ORYSJ cDNA clone:J013054N18, full insert sequen... 139 1e-31 tr|A7NVS3|A7NVS3_VITVI Chromosome chr18 scaffold_1, whole genome... 136 6e-31 tr|A2WSS4|A2WSS4_ORYSI Putative uncharacterized protein OS=Oryza... 135 1e-30 tr|A7PNZ3|A7PNZ3_VITVI Chromosome chr8 scaffold_23, whole genome... 133 5e-30 tr|A2ZVJ7|A2ZVJ7_ORYSJ Putative uncharacterized protein OS=Oryza... 130 5e-29 tr|B3S6S5|B3S6S5_TRIAD Putative uncharacterized protein OS=Trich... 121 2e-26 tr|A8J8C7|A8J8C7_CHLRE Predicted protein (Fragment) OS=Chlamydom... 102 9e-21 tr|A8N529|A8N529_COPC7 Putative uncharacterized protein OS=Copri... 100 6e-20 tr|B6NKQ5|B6NKQ5_BRAFL Putative uncharacterized protein OS=Branc... 99 1e-19 tr|B6NKP8|B6NKP8_BRAFL Putative uncharacterized protein OS=Branc... 99 1e-19 tr|Q1DEP2|Q1DEP2_MYXXD Alkaline ceramidase OS=Myxococcus xanthus... 99 2e-19 tr|Q095I8|Q095I8_STIAU Neutral/alkaline nonlysosomal ceramidase ... 98 2e-19 tr|B1VLK8|B1VLK8_STRGG Putative uncharacterized protein OS=Strep... 95 2e-18 tr|B4R1M6|B4R1M6_DROSI GD21520 OS=Drosophila simulans GN=GD21520... 94 4e-18 tr|B4PLW9|B4PLW9_DROYA CDase OS=Drosophila yakuba GN=Dyak\CDase ... 94 4e-18 tr|B4HZR3|B4HZR3_DROSE GM12881 OS=Drosophila sechellia GN=GM1288... 94 4e-18 tr|B3P584|B3P584_DROER GG11751 OS=Drosophila erecta GN=GG11751 P... 94 4e-18 tr|B4GNM1|B4GNM1_DROPE GL13459 OS=Drosophila persimilis GN=GL134... 94 5e-18 tr|A4V3N7|A4V3N7_DROME Ceramidase, isoform B OS=Drosophila melan... 94 5e-18 tr|B4LAQ6|B4LAQ6_DROMO GI11253 OS=Drosophila mojavensis GN=GI112... 93 7e-18 tr|B4K8R6|B4K8R6_DROMO GI24856 OS=Drosophila mojavensis GN=GI248... 93 7e-18 tr|B3DM04|B3DM04_XENTR LOC100170585 protein OS=Xenopus tropicali... 93 9e-18 tr|B7ZN55|B7ZN55_MOUSE Asah2 protein OS=Mus musculus GN=Asah2 PE... 92 2e-17
>tr|A9TGT4|A9TGT4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_92578 PE=4 SV=1 Length = 741
Score = 159 bits (403), Expect = 6e-38 Identities = 79/106 (74%), Positives = 90/106 (84%) Frame = +1
Query: 208 IGTESYDITGPAADVNVMGYANPLQNAAGIRIRLRARTFIVAEKSSTNESIQNRIVFVNL 387 IG SYDITGPAADVN+MGYANPLQNAAGI +RLRAR FIVAE SS + NR++FVNL Sbjct: 25 IGVGSYDITGPAADVNMMGYANPLQNAAGIHLRLRARAFIVAELSSNMDG--NRVLFVNL 82
Query: 388 DACMASQAVTNKVLQRLMNRYGDMYSEKNVGINGTHTHSGPGGYLQ 525 DACMAS AVT +VL RL RYG++Y+EKNV I+GTHTHSGPGG+LQ Sbjct: 83 DACMASMAVTLRVLSRLRERYGNLYTEKNVAISGTHTHSGPGGFLQ 128
>tr|Q9LNV7|Q9LNV7_ARATH F22G5.28 OS=Arabidopsis thaliana PE=4 SV=1 Length = 808
Score = 144 bits (363), Expect = 3e-33 Identities = 74/111 (66%), Positives = 85/111 (76%) Frame = +1
Query: 193 HLGCLIGTESYDITGPAADVNVMGYANPLQNAAGIRIRLRARTFIVAEKSSTNESIQNRI 372 H LIG SYDITGPAADVN+MGYAN Q A+GI RLRARTFIV+E R+ Sbjct: 35 HSEYLIGLGSYDITGPAADVNMMGYANMEQVASGIHFRLRARTFIVSEPQG------KRV 88
Query: 373 VFVNLDACMASQAVTNKVLQRLMNRYGDMYSEKNVGINGTHTHSGPGGYLQ 525 VFVNLDACMASQ V KV++RL RYGD+Y+E+NVGI+G HTH+GPGGYLQ Sbjct: 89 VFVNLDACMASQIVKLKVIERLKARYGDLYTEQNVGISGIHTHAGPGGYLQ 139
>tr|A9RDV4|A9RDV4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_55062 PE=4 SV=1 Length = 716
Score = 144 bits (363), Expect = 3e-33 Identities = 72/102 (70%), Positives = 81/102 (79%) Frame = +1
Query: 220 SYDITGPAADVNVMGYANPLQNAAGIRIRLRARTFIVAEKSSTNESIQNRIVFVNLDACM 399 SYDITGPAADVN+MGY N Q+AAGI RLRAR FIVAE S+ + R+VFVNLDACM Sbjct: 3 SYDITGPAADVNMMGYGNTGQSAAGIHFRLRARVFIVAEASNITDG--KRVVFVNLDACM 60
Query: 400 ASQAVTNKVLQRLMNRYGDMYSEKNVGINGTHTHSGPGGYLQ 525 AS VT +VL RL RYGD+Y+ KNV I+GTHTHSGPGGYLQ Sbjct: 61 ASMVVTLRVLSRLKQRYGDLYTAKNVAISGTHTHSGPGGYLQ 102
>tr|A7NYM9|A7NYM9_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024181001 PE=4 SV=1 Length = 773
Score = 143 bits (361), Expect = 5e-33 Identities = 72/107 (67%), Positives = 83/107 (77%) Frame = +1
Query: 205 LIGTESYDITGPAADVNVMGYANPLQNAAGIRIRLRARTFIVAEKSSTNESIQNRIVFVN 384 L+G SYDITGPAADVN+MGYAN Q A+G+ RLRARTFIVAE NR+ FVN Sbjct: 48 LVGLGSYDITGPAADVNMMGYANTEQIASGVHFRLRARTFIVAEPQG------NRVAFVN 101
Query: 385 LDACMASQAVTNKVLQRLMNRYGDMYSEKNVGINGTHTHSGPGGYLQ 525 LDACMASQ VT KVL+RL RYG++Y+E NV I+G HTH+GPGGYLQ Sbjct: 102 LDACMASQLVTIKVLERLKARYGNLYTENNVAISGIHTHAGPGGYLQ 148
>tr|B7ZZK1|B7ZZK1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 785
Score = 142 bits (358), Expect = 1e-32 Identities = 72/107 (67%), Positives = 83/107 (77%) Frame = +1
Query: 205 LIGTESYDITGPAADVNVMGYANPLQNAAGIRIRLRARTFIVAEKSSTNESIQNRIVFVN 384 L+G SYDITGPAADVN+MGYAN Q A+GI RL+AR FIVAE + R+VFVN Sbjct: 42 LVGMGSYDITGPAADVNMMGYANAEQIASGIHFRLKARAFIVAEPNG------KRVVFVN 95
Query: 385 LDACMASQAVTNKVLQRLMNRYGDMYSEKNVGINGTHTHSGPGGYLQ 525 LDACMASQ VT KVL+RL RYGD+Y+E NV I+G HTH+GPGGYLQ Sbjct: 96 LDACMASQLVTIKVLERLKARYGDLYNENNVAISGIHTHAGPGGYLQ 142
>tr|B5TWK7|B5TWK7_HORVU Neutral ceramidase OS=Hordeum vulgare PE=2 SV=1 Length = 785
Score = 139 bits (350), Expect = 9e-32 Identities = 70/107 (65%), Positives = 82/107 (76%) Frame = +1
Query: 205 LIGTESYDITGPAADVNVMGYANPLQNAAGIRIRLRARTFIVAEKSSTNESIQNRIVFVN 384 L+G SYDITGPAADVN+MGYAN Q A+GI RL++R FIVAE + R+VFVN Sbjct: 42 LVGMGSYDITGPAADVNMMGYANTEQIASGIHFRLKSRAFIVAEPNG------ERVVFVN 95
Query: 385 LDACMASQAVTNKVLQRLMNRYGDMYSEKNVGINGTHTHSGPGGYLQ 525 LDACMASQ V KVL+RL RYGD+Y+E NV I+G HTH+GPGGYLQ Sbjct: 96 LDACMASQLVNIKVLERLKARYGDLYNENNVAISGIHTHAGPGGYLQ 142
>tr|A9YFM2|A9YFM2_WHEAT Neutral ceramidase OS=Triticum aestivum PE=2 SV=1 Length = 785
Score = 139 bits (350), Expect = 9e-32 Identities = 70/107 (65%), Positives = 82/107 (76%) Frame = +1
Query: 205 LIGTESYDITGPAADVNVMGYANPLQNAAGIRIRLRARTFIVAEKSSTNESIQNRIVFVN 384 L+G SYDITGPAADVN+MGYAN Q A+GI RL++R FIVAE + R+VFVN Sbjct: 42 LVGMGSYDITGPAADVNMMGYANTEQIASGIHFRLKSRAFIVAEPNG------KRVVFVN 95
Query: 385 LDACMASQAVTNKVLQRLMNRYGDMYSEKNVGINGTHTHSGPGGYLQ 525 LDACMASQ V KVL+RL RYGD+Y+E NV I+G HTH+GPGGYLQ Sbjct: 96 LDACMASQLVNIKVLERLKARYGDLYNENNVAISGIHTHAGPGGYLQ 142
>tr|Q0JL46|Q0JL46_ORYSJ cDNA clone:J013054N18, full insert sequence OS=Oryza sativa subsp. japonica GN=Os01g0624000 PE=2 SV=1 Length = 785
Score = 139 bits (349), Expect = 1e-31 Identities = 69/107 (64%), Positives = 83/107 (77%) Frame = +1
Query: 205 LIGTESYDITGPAADVNVMGYANPLQNAAGIRIRLRARTFIVAEKSSTNESIQNRIVFVN 384 L+G S+DITGPAADVN+MGYAN Q A+GI RL++R FIVAE + R+VFVN Sbjct: 42 LVGMGSFDITGPAADVNMMGYANTEQIASGIHFRLKSRAFIVAEPNG------KRVVFVN 95
Query: 385 LDACMASQAVTNKVLQRLMNRYGDMYSEKNVGINGTHTHSGPGGYLQ 525 +DACMASQ VT KVL+RL RYGD+Y+E NV I+G HTH+GPGGYLQ Sbjct: 96 IDACMASQIVTIKVLERLKARYGDLYNENNVAISGIHTHAGPGGYLQ 142
>tr|A7NVS3|A7NVS3_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015545001 PE=4 SV=1 Length = 706
Score = 136 bits (343), Expect = 6e-31 Identities = 72/114 (63%), Positives = 85/114 (74%) Frame = +1
Query: 184 HLIHLGCLIGTESYDITGPAADVNVMGYANPLQNAAGIRIRLRARTFIVAEKSSTNESIQ 363 H + G LIG SYD+TGPAADVN+MGYAN Q++AGI RLRAR FIVAE Sbjct: 24 HATYGGYLIGIGSYDMTGPAADVNMMGYANIEQHSAGIHFRLRARAFIVAEGPQGV---- 79
Query: 364 NRIVFVNLDACMASQAVTNKVLQRLMNRYGDMYSEKNVGINGTHTHSGPGGYLQ 525 R FVNLDA MASQ VT KVL+RL +RYG++Y+E N+ I+GTHTH+GPGGYLQ Sbjct: 80 -RFAFVNLDAGMASQLVTIKVLERLKSRYGNLYNEDNLAISGTHTHAGPGGYLQ 132
>tr|A2WSS4|A2WSS4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_02918 PE=4 SV=1 Length = 755
Score = 135 bits (341), Expect = 1e-30 Identities = 68/102 (66%), Positives = 80/102 (78%) Frame = +1
Query: 220 SYDITGPAADVNVMGYANPLQNAAGIRIRLRARTFIVAEKSSTNESIQNRIVFVNLDACM 399 S+DITGPAADVN+MGYAN Q A+GI RL++R FIVAE + R+VFVNLDACM Sbjct: 3 SFDITGPAADVNMMGYANTEQIASGIHFRLKSRAFIVAEPNG------KRVVFVNLDACM 56
Query: 400 ASQAVTNKVLQRLMNRYGDMYSEKNVGINGTHTHSGPGGYLQ 525 ASQ VT KVL+RL RYGD+Y+E NV I+G HTH+GPGGYLQ Sbjct: 57 ASQIVTIKVLERLKARYGDLYNENNVAISGIHTHAGPGGYLQ 98
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