DK961592 |
Clone id |
TST39A01NGRL0010_I23 |
Library |
TST39 |
Length |
648 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_I23. 5' end sequence. |
Accession |
DK961592 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GAAGGCTTTTACATTTCCAGGGAAAGCAGAGGAAGGGCTCTTGTCGATCGACTAGGACAC CCTCGATCGAAGGACTGTGTTGTGCACGATCGCGGGCGATCGGGATTGGCAGTGGGCATT TTGTTGGGCGATGGCCGGTGGTGGAACGCAACAGAGCCTCCGCAGGGCTCTGGGTGCGCT CAAAGACACCACAAAAGTTGGGCTTGCCAAGGTTAACAGCGAATTCAAGGACTTAGACAT CGCCGTTGTCAAGGCCACCAACCACGTAGAGTGCCCTCCAAAAGACAAGCACGTCCGAGT TGTATTTCTAGCAACCTCAGCTTCAAGGCCAAGAGCAGATGTGGCTTATTGCTTGCAAGC TCTGGCAAGACGACTCACAAAGACTCATAATTGGACTGTTGCTCTGAAAGCGCTGATCGT GATTCATAGAGTTTTGAGGGAAGGCGACCCGACTTTTACGGAAGAGATCAGCAGCTATTC TCGCGGTCGAGCACATTTTCTTAATTTATCCAATTTCAAGGATGATTCAAGTCCCCTTGC TTGCGACTATTCAGCTTGGGTTAGGACGTATGCCTTATTTTTGGAAGAGCGCTTGGAGTG TATGCGGACTTTAAGATATGATGTACAAGCAGAAAGAGTCCAAGGTCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P94017 |
Definition |
sp|P94017|CAP9_ARATH Putative clathrin assembly protein At1g14910 OS=Arabidopsis thaliana |
Align length |
166 |
Score (bit) |
249.0 |
E-value |
9.0e-66 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RML7 |
Definition |
tr|A9RML7|A9RML7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
167 |
Score (bit) |
273.0 |
E-value |
5.0e-72 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961592|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0010_I23, 5' (648 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RML7|A9RML7_PHYPA Predicted protein (Fragment) OS=Physcomit... 273 5e-72 tr|B8LKD7|B8LKD7_PICSI Putative uncharacterized protein OS=Picea... 268 3e-70 tr|A7PFA2|A7PFA2_VITVI Chromosome chr11 scaffold_13, whole genom... 262 1e-68 tr|A5C2E3|A5C2E3_VITVI Putative uncharacterized protein OS=Vitis... 262 1e-68 tr|A9TW43|A9TW43_PHYPA Predicted protein OS=Physcomitrella paten... 259 1e-67 tr|A4Q7L2|A4Q7L2_MEDTR ANTH OS=Medicago truncatula GN=MtrDRAFT_A... 254 3e-66 tr|A7QXM4|A7QXM4_VITVI Chromosome undetermined scaffold_226, who... 254 4e-66 tr|A7P3R3|A7P3R3_VITVI Chromosome chr1 scaffold_5, whole genome ... 250 5e-65 tr|B4FLN4|B4FLN4_MAIZE Putative uncharacterized protein OS=Zea m... 241 3e-62 tr|Q658F5|Q658F5_ORYSJ Os06g0175500 protein OS=Oryza sativa subs... 238 2e-61 tr|B8A812|B8A812_ORYSI Putative uncharacterized protein OS=Oryza... 238 3e-61 tr|Q5N9P9|Q5N9P9_ORYSJ cDNA clone:001-113-H02, full insert seque... 237 4e-61 tr|A2ZWU2|A2ZWU2_ORYSJ Putative uncharacterized protein OS=Oryza... 237 4e-61 tr|Q0DG77|Q0DG77_ORYSJ Os05g0549000 protein OS=Oryza sativa subs... 237 5e-61 tr|B7ZXB5|B7ZXB5_MAIZE Putative uncharacterized protein OS=Zea m... 237 5e-61 tr|A2Y754|A2Y754_ORYSI Putative uncharacterized protein OS=Oryza... 237 5e-61 tr|Q6EUQ6|Q6EUQ6_ORYSJ Os02g0175700 protein OS=Oryza sativa subs... 236 1e-60 tr|B8AIK8|B8AIK8_ORYSI Putative uncharacterized protein OS=Oryza... 236 1e-60 tr|A7PFI9|A7PFI9_VITVI Chromosome chr11 scaffold_14, whole genom... 234 4e-60 tr|Q5Z855|Q5Z855_ORYSJ Destination factor-like OS=Oryza sativa s... 225 2e-57 tr|B8B245|B8B245_ORYSI Putative uncharacterized protein OS=Oryza... 225 2e-57 tr|A3BF31|A3BF31_ORYSJ Putative uncharacterized protein OS=Oryza... 225 2e-57 tr|Q69SJ3|Q69SJ3_ORYSJ Os02g0803300 protein OS=Oryza sativa subs... 223 8e-57 tr|B8AEE5|B8AEE5_ORYSI Putative uncharacterized protein OS=Oryza... 223 8e-57 tr|B6TW95|B6TW95_MAIZE Clathrin assembly protein OS=Zea mays PE=... 219 1e-55 tr|Q651U7|Q651U7_ORYSJ Phosphoprotein-like OS=Oryza sativa subsp... 215 2e-54 tr|Q0DAD5|Q0DAD5_ORYSJ Os06g0661400 protein OS=Oryza sativa subs... 215 2e-54 tr|A3B8X1|A3B8X1_ORYSJ Putative uncharacterized protein OS=Oryza... 214 5e-54 tr|A2Y9X3|A2Y9X3_ORYSI Putative uncharacterized protein OS=Oryza... 214 5e-54 tr|A3ACE3|A3ACE3_ORYSJ Putative uncharacterized protein OS=Oryza... 195 2e-48
>tr|A9RML7|A9RML7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_21255 PE=4 SV=1 Length = 457
Score = 273 bits (699), Expect = 5e-72 Identities = 130/167 (77%), Positives = 150/167 (89%) Frame = +2
Query: 146 TQQSLRRALGALKDTTKVGLAKVNSEFKDLDIAVVKATNHVECPPKDKHVRVVFLATSAS 325 +QQS+R+ALGA+KD+TKVGLAKVNS +K+LDIAVVKATNHVECPPK+KHVR++FLATSAS Sbjct: 3 SQQSIRKALGAIKDSTKVGLAKVNSTYKELDIAVVKATNHVECPPKEKHVRMIFLATSAS 62
Query: 326 RPRADVAYCLQALARRLTKTHNWTVALKALIVIHRVLREGDPTFTEEISSYSRGRAHFLN 505 R RADVAYC+ ALARR+ KTHNWTVALK+++VIHR LREGDPTF EE+ +Y R R H LN Sbjct: 63 RLRADVAYCIHALARRIAKTHNWTVALKSMMVIHRTLREGDPTFREELINYGRNRGHILN 122
Query: 506 LSNFKDDSSPLACDYSAWVRTYALFLEERLECMRTLRYDVQAERVQG 646 LSNFKDDSSP A DYSAWVRTYALFLEERLEC R L+YDV++ER G Sbjct: 123 LSNFKDDSSPHAWDYSAWVRTYALFLEERLECFRVLKYDVESERPTG 169
>tr|B8LKD7|B8LKD7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 547
Score = 268 bits (684), Expect = 3e-70 Identities = 129/171 (75%), Positives = 148/171 (86%) Frame = +2
Query: 131 MAGGGTQQSLRRALGALKDTTKVGLAKVNSEFKDLDIAVVKATNHVECPPKDKHVRVVFL 310 M+GGGTQQSLR+ALGALKDTT V LAKVNS++KDLDIA+VKATNHVE P K+KH+R++F Sbjct: 2 MSGGGTQQSLRKALGALKDTTTVSLAKVNSDYKDLDIAIVKATNHVERPAKEKHIRIIFA 61
Query: 311 ATSASRPRADVAYCLQALARRLTKTHNWTVALKALIVIHRVLREGDPTFTEEISSYSRGR 490 ATSA+RPRADVAYC+ ALARRL KTHNW VALK LIVIHR LRE DPTF EE+ +YSR R Sbjct: 62 ATSATRPRADVAYCIHALARRLAKTHNWAVALKTLIVIHRALREVDPTFREELINYSRSR 121
Query: 491 AHFLNLSNFKDDSSPLACDYSAWVRTYALFLEERLECMRTLRYDVQAERVQ 643 H LNLS FKDDSS A DYSAWVR+YALFLEERLEC R L+YD++ ER++ Sbjct: 122 GHILNLSYFKDDSSSNAWDYSAWVRSYALFLEERLECYRVLKYDIETERLR 172
>tr|A7PFA2|A7PFA2_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016968001 PE=4 SV=1 Length = 551
Score = 262 bits (670), Expect = 1e-68 Identities = 123/169 (72%), Positives = 148/169 (87%) Frame = +2
Query: 131 MAGGGTQQSLRRALGALKDTTKVGLAKVNSEFKDLDIAVVKATNHVECPPKDKHVRVVFL 310 M+GGGTQ+SLR+ALGA+KD+T VGLAKVNS++K+LDIA+VKATNHVE P K+KH+R +F Sbjct: 1 MSGGGTQKSLRKALGAIKDSTTVGLAKVNSDYKELDIAIVKATNHVERPAKEKHIRAIFS 60
Query: 311 ATSASRPRADVAYCLQALARRLTKTHNWTVALKALIVIHRVLREGDPTFTEEISSYSRGR 490 A SA+RPRADVAYC+ ALARRL+KTHNW VALK L+VIHR LRE DPTF EE+ +Y R R Sbjct: 61 AISATRPRADVAYCIHALARRLSKTHNWAVALKTLVVIHRALREVDPTFHEELINYGRSR 120
Query: 491 AHFLNLSNFKDDSSPLACDYSAWVRTYALFLEERLECMRTLRYDVQAER 637 +H LNL++FKDDSSP A DYSAWVRTYALFLEERLEC R L+YD++ +R Sbjct: 121 SHMLNLAHFKDDSSPNAWDYSAWVRTYALFLEERLECFRVLKYDIETDR 169
>tr|A5C2E3|A5C2E3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037564 PE=4 SV=1 Length = 588
Score = 262 bits (670), Expect = 1e-68 Identities = 123/169 (72%), Positives = 148/169 (87%) Frame = +2
Query: 131 MAGGGTQQSLRRALGALKDTTKVGLAKVNSEFKDLDIAVVKATNHVECPPKDKHVRVVFL 310 M+GGGTQ+SLR+ALGA+KD+T VGLAKVNS++K+LDIA+VKATNHVE P K+KH+R +F Sbjct: 1 MSGGGTQKSLRKALGAIKDSTTVGLAKVNSDYKELDIAIVKATNHVERPAKEKHIRAIFS 60
Query: 311 ATSASRPRADVAYCLQALARRLTKTHNWTVALKALIVIHRVLREGDPTFTEEISSYSRGR 490 A SA+RPRADVAYC+ ALARRL+KTHNW VALK L+VIHR LRE DPTF EE+ +Y R R Sbjct: 61 AISATRPRADVAYCIHALARRLSKTHNWAVALKTLVVIHRALREVDPTFHEELINYGRSR 120
Query: 491 AHFLNLSNFKDDSSPLACDYSAWVRTYALFLEERLECMRTLRYDVQAER 637 +H LNL++FKDDSSP A DYSAWVRTYALFLEERLEC R L+YD++ +R Sbjct: 121 SHMLNLAHFKDDSSPNAWDYSAWVRTYALFLEERLECFRVLKYDIETDR 169
>tr|A9TW43|A9TW43_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172312 PE=4 SV=1 Length = 488
Score = 259 bits (661), Expect = 1e-67 Identities = 125/170 (73%), Positives = 146/170 (85%) Frame = +2
Query: 137 GGGTQQSLRRALGALKDTTKVGLAKVNSEFKDLDIAVVKATNHVECPPKDKHVRVVFLAT 316 G +QQS+R+ALGA+KD+TKVGLAKVNS +K+LDIAVVKATNHVECPPK+KHVR++FLAT Sbjct: 159 GMASQQSIRKALGAIKDSTKVGLAKVNSTYKELDIAVVKATNHVECPPKEKHVRMIFLAT 218
Query: 317 SASRPRADVAYCLQALARRLTKTHNWTVALKALIVIHRVLREGDPTFTEEISSYSRGRAH 496 S+SRPRADVAYC+ ALARR+ KTHNWT L++L+ LREGDPTF EE+ +Y R R H Sbjct: 219 SSSRPRADVAYCIHALARRIAKTHNWTEILRSLL---WTLREGDPTFREELINYGRNRGH 275
Query: 497 FLNLSNFKDDSSPLACDYSAWVRTYALFLEERLECMRTLRYDVQAERVQG 646 LNLSNFKDDSSP A DYSAWVRTYALFLEERLEC R L+YDV++ER G Sbjct: 276 ILNLSNFKDDSSPQAWDYSAWVRTYALFLEERLECFRVLKYDVESERPTG 325
>tr|A4Q7L2|A4Q7L2_MEDTR ANTH OS=Medicago truncatula GN=MtrDRAFT_AC182813g7v2 PE=4 SV=1 Length = 545
Score = 254 bits (649), Expect = 3e-66 Identities = 121/166 (72%), Positives = 143/166 (86%) Frame = +2
Query: 140 GGTQQSLRRALGALKDTTKVGLAKVNSEFKDLDIAVVKATNHVECPPKDKHVRVVFLATS 319 GGTQ SLR+ALGALKDTT V LAKVNS +K+LDIA+V+ATNHVE P K+KH+R +F A S Sbjct: 3 GGTQNSLRKALGALKDTTTVSLAKVNSGYKELDIAIVRATNHVERPAKEKHIRAIFSAIS 62
Query: 320 ASRPRADVAYCLQALARRLTKTHNWTVALKALIVIHRVLREGDPTFTEEISSYSRGRAHF 499 A+RPRADVAYC+ ALARRL+KTHNW VALK LIVIHR LRE DPTF EE+ +Y R R+H Sbjct: 63 ATRPRADVAYCIHALARRLSKTHNWAVALKTLIVIHRALREVDPTFHEELINYGRSRSHM 122
Query: 500 LNLSNFKDDSSPLACDYSAWVRTYALFLEERLECMRTLRYDVQAER 637 LN+++FKDDSSP A DYSAWVR+YALFLEERLEC R L+YD++A+R Sbjct: 123 LNMAHFKDDSSPNAWDYSAWVRSYALFLEERLECFRVLKYDIEADR 168
>tr|A7QXM4|A7QXM4_VITVI Chromosome undetermined scaffold_226, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00009255001 PE=4 SV=1 Length = 424
Score = 254 bits (648), Expect = 4e-66 Identities = 124/166 (74%), Positives = 141/166 (84%) Frame = +2
Query: 143 GTQQSLRRALGALKDTTKVGLAKVNSEFKDLDIAVVKATNHVECPPKDKHVRVVFLATSA 322 GT +S R+A GALKD+T VGLAKVNSEFKDLDIA+VKATNHVECPPK++HVR +F ATS Sbjct: 2 GTFESFRKAYGALKDSTMVGLAKVNSEFKDLDIAIVKATNHVECPPKERHVRKIFSATSV 61
Query: 323 SRPRADVAYCLQALARRLTKTHNWTVALKALIVIHRVLREGDPTFTEEISSYSRGRAHFL 502 RPR+DVAYC+ ALARRL KT NW VALK LIVIHR LREGDPTF EE+ +YS R H L Sbjct: 62 VRPRSDVAYCIHALARRLAKTKNWIVALKTLIVIHRTLREGDPTFREELLNYS-NRGHVL 120
Query: 503 NLSNFKDDSSPLACDYSAWVRTYALFLEERLECMRTLRYDVQAERV 640 +SNFKDDSSPLA D SAWVRTYALFLEERLEC R L+YD+++ER+ Sbjct: 121 QISNFKDDSSPLAWDCSAWVRTYALFLEERLECFRVLKYDIESERL 166
>tr|A7P3R3|A7P3R3_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030545001 PE=4 SV=1 Length = 567
Score = 250 bits (639), Expect = 5e-65 Identities = 121/165 (73%), Positives = 142/165 (86%) Frame = +2
Query: 146 TQQSLRRALGALKDTTKVGLAKVNSEFKDLDIAVVKATNHVECPPKDKHVRVVFLATSAS 325 T Q+ R+A GALKD+TKVGLA VNS+F DLD+AVVKATNHVECPPK++H+R + +ATSA Sbjct: 3 TLQTWRKAYGALKDSTKVGLAHVNSDFADLDVAVVKATNHVECPPKERHIRKILVATSAI 62
Query: 326 RPRADVAYCLQALARRLTKTHNWTVALKALIVIHRVLREGDPTFTEEISSYSRGRAHFLN 505 RPRADVAYC+ AL+RRL KTHNWTVALK LIVIHR LREGDPTF EE+ ++S+ R L Sbjct: 63 RPRADVAYCIHALSRRLAKTHNWTVALKTLIVIHRALREGDPTFREELLNFSQ-RGRILQ 121
Query: 506 LSNFKDDSSPLACDYSAWVRTYALFLEERLECMRTLRYDVQAERV 640 LSNFKDDSSP+A D SAWVRTYALFLEERLEC R L+YD++AER+ Sbjct: 122 LSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRILKYDIEAERL 166
>tr|B4FLN4|B4FLN4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 563
Score = 241 bits (615), Expect = 3e-62 Identities = 116/165 (70%), Positives = 139/165 (84%) Frame = +2
Query: 146 TQQSLRRALGALKDTTKVGLAKVNSEFKDLDIAVVKATNHVECPPKDKHVRVVFLATSAS 325 + QS R+A GA+KDTT V LA +NS+FKDLD+A+VKATNHVECPPK++H+R V ATS + Sbjct: 3 SMQSWRKAYGAIKDTTTVSLANLNSDFKDLDVAIVKATNHVECPPKERHLRKVVAATSIA 62
Query: 326 RPRADVAYCLQALARRLTKTHNWTVALKALIVIHRVLREGDPTFTEEISSYSRGRAHFLN 505 RPRADVAYC+ ALARRL KT NW VALKAL+VIHR+LREGDPTF EE+ ++++ R L Sbjct: 63 RPRADVAYCIHALARRLAKTRNWIVALKALVVIHRLLREGDPTFREELLNFTQ-RGRILQ 121
Query: 506 LSNFKDDSSPLACDYSAWVRTYALFLEERLECMRTLRYDVQAERV 640 LSNFKDDSSP+A D SAWVRTY LFLEERLEC R L+YDV+AER+ Sbjct: 122 LSNFKDDSSPIAWDCSAWVRTYGLFLEERLECFRVLKYDVEAERL 166
>tr|Q658F5|Q658F5_ORYSJ Os06g0175500 protein OS=Oryza sativa subsp. japonica GN=P0015E04.14 PE=2 SV=1 Length = 570
Score = 238 bits (607), Expect = 2e-61 Identities = 118/169 (69%), Positives = 140/169 (82%), Gaps = 1/169 (0%) Frame = +2
Query: 131 MAGGGTQQ-SLRRALGALKDTTKVGLAKVNSEFKDLDIAVVKATNHVECPPKDKHVRVVF 307 MAG GTQ SLR+ LGALKDTT V LAKVNS++K+LDIA+VKATNHVE P K+K++R +F Sbjct: 1 MAGVGTQPTSLRKYLGALKDTTTVSLAKVNSDYKELDIAIVKATNHVERPSKEKYIREIF 60
Query: 308 LATSASRPRADVAYCLQALARRLTKTHNWTVALKALIVIHRVLREGDPTFTEEISSYSRG 487 + SASRPRADVAYC+ ALARRL+KT NW VALK LIVIHR LRE DPTF EE+ +Y R Sbjct: 61 YSISASRPRADVAYCIHALARRLSKTRNWAVALKTLIVIHRALREVDPTFREELINYGRS 120
Query: 488 RAHFLNLSNFKDDSSPLACDYSAWVRTYALFLEERLECMRTLRYDVQAE 634 R+H LNL+ FKDDSS A D+SAW+RTYAL+LEERLEC R L+YDV+ + Sbjct: 121 RSHMLNLAYFKDDSSAGAWDFSAWIRTYALYLEERLECFRVLKYDVETD 169
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