DK961534 |
Clone id |
TST39A01NGRL0010_G07 |
Library |
TST39 |
Length |
644 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_G07. 5' end sequence. |
Accession |
DK961534 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
AATTAAGGAGAGTCAGTTTTCTTAACCCTCTTTGTGGCCAGATTAAACCCTATCTGTGGG CAGATTAGGGAGAGTAAGTTCACTAATCCTCTCCTAACCATTCTCAGAGGCAGAATTTAC ACACTTAATCGACTTCTCTGCAGCAATTTACGTTCATTACCCACCACAGAGTGCGAGATT TCGTGAAGGGTTTTTAGATGTTGAAAAACGGGTAGAGAGATTGCCGCACCCATTATACTT GAAAGGTCTCATGCTCATCAAGGACAAAGTTGTCCTATCAAATAGTGCAGAATGGTACAC ACGTTCGACACATCGACATGTGTATGCCGCCCTTGCAGAGCTAAATGTGAGAATTTGTGC AATTGATGGTGCCGCCAATGTAGCCTTCATAGGAAAAAAGATATACATATGAATGTGCGA CTGGAGCCGCTGGTATGCGCCCAACAGGATCAATTGAGGCGATAAAGTTCGTCGCTTCCT TGTAACATCAGACATAGTTTACACCACAAGCAGTTGAGCTCTACAGTCTACTCAACCAAC GATGAGGCTTAAGCTTTATTGGCTGCAAAAAATAAGGGCATTTCGATCGAAAGGCCTTCC CAAAAAGAAAAAGTTGATTGCAGCTGCGTCAGAGAGTAGCACAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P44497 |
Definition |
sp|P44497|PPNK_HAEIN Probable inorganic polyphosphate/ATP-NAD kinase OS=Haemophilus influenzae |
Align length |
66 |
Score (bit) |
32.0 |
E-value |
2.8 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6F5H7 |
Definition |
tr|B6F5H7|B6F5H7_LIBAS Putative uncharacterized protein OS=Candidatus Liberibacter asiaticus str. psy62 |
Align length |
76 |
Score (bit) |
36.2 |
E-value |
1.8 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961534|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0010_G07, 5' (644 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B6F5H7|B6F5H7_LIBAS Putative uncharacterized protein OS=Candi... 36 1.8 tr|B5B7T4|B5B7T4_9INFB NB protein (Fragment) OS=Influenza B viru... 35 5.1 tr|B1AFY8|B1AFY8_9INFB NB protein (Fragment) OS=Influenza B viru... 34 6.7 tr|B1AFY6|B1AFY6_9INFB NB protein (Fragment) OS=Influenza B viru... 34 6.7 tr|B1AFX2|B1AFX2_9INFB NB protein (Fragment) OS=Influenza B viru... 34 6.7 tr|B1AFS3|B1AFS3_9INFB NB protein (Fragment) OS=Influenza B viru... 34 6.7 tr|B1AFP1|B1AFP1_9INFB NB protein (Fragment) OS=Influenza B viru... 34 6.7 tr|A4HWG8|A4HWG8_LEIIN Putative uncharacterized protein OS=Leish... 34 6.7 tr|B6JYH1|B6JYH1_SCHJP Putative uncharacterized protein OS=Schiz... 34 6.7 tr|B2WNF4|B2WNF4_PYRTR Predicted protein OS=Pyrenophora tritici-... 34 8.8
>tr|B6F5H7|B6F5H7_LIBAS Putative uncharacterized protein OS=Candidatus Liberibacter asiaticus str. psy62 GN=CLIBASIA_05708 PE=4 SV=1 Length = 809
Score = 36.2 bits (82), Expect = 1.8 Identities = 23/76 (30%), Positives = 42/76 (55%) Frame = -1
Query: 248 DLSSIMGAAISLPVFQHLKTLHEISHSVVGNERKLLQRSRLSV*ILPLRMVRRGLVNLLS 69 +L+ +MG + +P+ L EI S+VG ++ + L + IL ++R+ LV L+S Sbjct: 619 NLARLMGQFLVMPISWSRMHLIEIPSSLVGVSSQVYRAKALVIGILGEELIRKTLVPLIS 678
Query: 68 LICPQIGFNLATKRVK 21 PQ+ F+ T+ +K Sbjct: 679 GKEPQLDFSDPTEYIK 694
>tr|B5B7T4|B5B7T4_9INFB NB protein (Fragment) OS=Influenza B virus (B/New York/06/2008) GN=NB PE=4 SV=1 Length = 97
Score = 34.7 bits (78), Expect = 5.1 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Frame = -2
Query: 475 ATNFIASIDPVGRIPAA---PVAHSYVYLFSYEGYIGGTI----NCTNSHI*LCKGGIHM 317 AT +++P+ I + + S++ +F+ GYI NCTN+ I LCK Sbjct: 1 ATFNYTNVNPISHIRGSVIITICVSFIVIFTIFGYIAKIFTNRNNCTNNAIGLCK----R 56
Query: 316 SMCRTCVPFCT 284 C C PFC+ Sbjct: 57 IKCSGCEPFCS 67
>tr|B1AFY8|B1AFY8_9INFB NB protein (Fragment) OS=Influenza B virus (B/Pennsylvania/01/2007) GN=NB PE=4 SV=1 Length = 97
Score = 34.3 bits (77), Expect = 6.7 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 7/70 (10%) Frame = -2
Query: 475 ATNFIASIDPVGRIPAAPVAH---SYVYLFSYEGYIGGTI----NCTNSHI*LCKGGIHM 317 AT +++P+ I + V S++ + + GYI T NCTN+ I LCK Sbjct: 1 ATFNYTNVNPISHIRGSVVITICVSFIVILTIFGYIAKTFTNRNNCTNNAIGLCK----R 56
Query: 316 SMCRTCVPFC 287 C C PFC Sbjct: 57 IKCSGCEPFC 66
>tr|B1AFY6|B1AFY6_9INFB NB protein (Fragment) OS=Influenza B virus (B/Pennsylvania/01/2007) GN=NB PE=4 SV=1 Length = 97
Score = 34.3 bits (77), Expect = 6.7 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 7/70 (10%) Frame = -2
Query: 475 ATNFIASIDPVGRIPAAPVAH---SYVYLFSYEGYIGGTI----NCTNSHI*LCKGGIHM 317 AT +++P+ I + V S++ + + GYI T NCTN+ I LCK Sbjct: 1 ATFNYTNVNPISHIRGSVVITICVSFIVILTIFGYIAKTFTNRNNCTNNAIGLCK----R 56
Query: 316 SMCRTCVPFC 287 C C PFC Sbjct: 57 IKCSGCEPFC 66
>tr|B1AFX2|B1AFX2_9INFB NB protein (Fragment) OS=Influenza B virus (B/Pennsylvania/02/2007) GN=NB PE=4 SV=1 Length = 97
Score = 34.3 bits (77), Expect = 6.7 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 7/70 (10%) Frame = -2
Query: 475 ATNFIASIDPVGRIPAAPVAH---SYVYLFSYEGYIGGTI----NCTNSHI*LCKGGIHM 317 AT +++P+ I + V S++ + + GYI T NCTN+ I LCK Sbjct: 1 ATFNYTNVNPISHIRGSVVITICVSFIVILTIFGYIAKTFTNRNNCTNNAIGLCK----R 56
Query: 316 SMCRTCVPFC 287 C C PFC Sbjct: 57 IKCSGCEPFC 66
>tr|B1AFS3|B1AFS3_9INFB NB protein (Fragment) OS=Influenza B virus (B/Pennsylvania/02/2007) GN=NB PE=4 SV=1 Length = 97
Score = 34.3 bits (77), Expect = 6.7 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 7/70 (10%) Frame = -2
Query: 475 ATNFIASIDPVGRIPAAPVAH---SYVYLFSYEGYIGGTI----NCTNSHI*LCKGGIHM 317 AT +++P+ I + V S++ + + GYI T NCTN+ I LCK Sbjct: 1 ATFNYTNVNPISHIRGSVVITICVSFIVILTIFGYIAKTFTNRNNCTNNAIGLCK----R 56
Query: 316 SMCRTCVPFC 287 C C PFC Sbjct: 57 IKCSGCEPFC 66
>tr|B1AFP1|B1AFP1_9INFB NB protein (Fragment) OS=Influenza B virus (B/Pennsylvania/01/2007) GN=NB PE=4 SV=1 Length = 97
Score = 34.3 bits (77), Expect = 6.7 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 7/70 (10%) Frame = -2
Query: 475 ATNFIASIDPVGRIPAAPVAH---SYVYLFSYEGYIGGTI----NCTNSHI*LCKGGIHM 317 AT +++P+ I + V S++ + + GYI T NCTN+ I LCK Sbjct: 1 ATFNYTNVNPISHIRGSVVITICVSFIVILTIFGYIAKTFTNRNNCTNNAIGLCK----R 56
Query: 316 SMCRTCVPFC 287 C C PFC Sbjct: 57 IKCSGCEPFC 66
>tr|A4HWG8|A4HWG8_LEIIN Putative uncharacterized protein OS=Leishmania infantum GN=LinJ15.0740 PE=4 SV=1 Length = 3124
Score = 34.3 bits (77), Expect = 6.7 Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 10/86 (11%) Frame = -3
Query: 483 TRKRRTLSPQLILL---GAYQRLQSHIHMYIFF-----PMKATLAA--PSIAQILTFSSA 334 TR RTLS +L GA QRL H+H++I F P++A +AA +A + F Sbjct: 1482 TRGYRTLSMELCWPNPDGASQRLARHLHIWILFAVHGAPVRAAVAALCRDLATLDVFQGT 1541
Query: 333 RAAYTCRCVERVYHSALFDRTTLSLM 256 R A C + +A T S M Sbjct: 1542 RRATACAAAQSGESAAGCTATAASSM 1567
>tr|B6JYH1|B6JYH1_SCHJP Putative uncharacterized protein OS=Schizosaccharomyces japonicus yFS275 GN=SJAG_01633 PE=4 SV=1 Length = 1092
Score = 34.3 bits (77), Expect = 6.7 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%) Frame = +1
Query: 376 QCSLHRKKDIHMNVRLEPLVCAQQDQLRR*SSSLPCNIRHSLH-----HKQLSSTVYSTN 540 +C L+RK+ +N +LE L +QL+ +S L +R+SLH H+ STV S Sbjct: 672 KCDLYRKQSDAVNSKLESLQTESSEQLQAYASELE-ELRNSLHKEIVEHEVNKSTVKSLE 730
Query: 541 DE 546 DE Sbjct: 731 DE 732
>tr|B2WNF4|B2WNF4_PYRTR Predicted protein OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=PTRG_11411 PE=4 SV=1 Length = 394
Score = 33.9 bits (76), Expect = 8.8 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 7/66 (10%) Frame = +2
Query: 62 RLGRVSSLILS*PFSEAEFTHLIDFSAAIYVHYP---PQSARFREGFLDVEKR----VER 220 RL R SLI P S A FT +++F+ Y+HYP + + + G L++E+R +E Sbjct: 219 RLTRAFSLI---PASSAPFTLILNFAPEGYIHYPSFKKPNTKEKIGALNIERRMLNVLET 275
Query: 221 LPHPLY 238 + P+Y Sbjct: 276 IRMPVY 281
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