DK961517 |
Clone id |
TST39A01NGRL0010_F13 |
Library |
TST39 |
Length |
637 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_F13. 5' end sequence. |
Accession |
DK961517 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
AAAGAATGGATGCCAATTTTGGCAGAGACATAGCCAAGAAGAAACGCAAGGGAGCTGATC AGCTTCCTGAAACTGTAAAGGTCGATTGCAAGAAGCCGCAGGAAGAGGCACATCATGGCT TCGCCACCGTTGAGGAAAGCACGGAAAAATGTGAAGCAGACGATAGCGAGCAGAAAGCTG CCTTGCAGGAAAGAGCCATGTCTGCTGAAATGGAGGCCAGCATCCAAGAACTTCGCCAGA AGATTGACCAATTCACGCAGCAGGTTTCAGGACTTTTAGAGTCGGTAAAGGCCTTCTTCA TTGAGACTTCAAGTGCCTTTGAAGAGCGTATTGTGCTACTTCATCAAGCTCAAATTGATA AATGGGAGGAGGAAATAAAGTTGCTTGGAATGATTGACTCAGAAAATGAAGAAATGAACT TTCGGCTGAGCAATGCCCAGGAACTGCTAACTTCCATGTGAAACACTGGCGGCATCTAAA GCATGATTTTCTTCTGCTGCAGATGCACAGAATGTAGAATAGTTGCTTGATCAAAGGGAA AATACTTGATACTTACGAATTAAATGGAGGGCCTCTCACAGCTAGGGTTGTACGAGCTCT TAATTTGTGATACCTGGCTTATGTATGTATTTGTGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P14105 |
Definition |
sp|P14105|MYH9_CHICK Myosin-9 OS=Gallus gallus |
Align length |
152 |
Score (bit) |
36.2 |
E-value |
0.15 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7Q109 |
Definition |
tr|A7Q109|A7Q109_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
100 |
Score (bit) |
89.4 |
E-value |
2.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961517|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0010_F13, 5' (637 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7Q109|A7Q109_VITVI Chromosome chr7 scaffold_42, whole genome... 89 2e-16 tr|A5ATJ5|A5ATJ5_VITVI Putative uncharacterized protein OS=Vitis... 89 2e-16 tr|A0S861|A0S861_TOBAC Knotted 1-binding protein 36 OS=Nicotiana... 85 3e-15 tr|Q9LYY0|Q9LYY0_ARATH Putative uncharacterized protein F15A17_8... 81 5e-14 tr|Q8GY72|Q8GY72_ARATH Putative uncharacterized protein At5g0305... 81 5e-14 tr|Q10SW8|Q10SW8_ORYSJ Transposon protein, putative, unclassifie... 71 5e-11 tr|Q0DVX1|Q0DVX1_ORYSJ Os03g0108700 protein OS=Oryza sativa subs... 71 5e-11 tr|Q84VE6|Q84VE6_ORYSJ Putative uncharacterized protein (Fragmen... 70 8e-11 tr|A9S5U8|A9S5U8_PHYPA Predicted protein OS=Physcomitrella paten... 70 8e-11 tr|Q8H7P7|Q8H7P7_ORYSJ Putative uncharacterized protein OJ1384D0... 68 4e-10 tr|A2XBL4|A2XBL4_ORYSI Putative uncharacterized protein OS=Oryza... 68 4e-10 tr|A9PFY5|A9PFY5_POPTR Putative uncharacterized protein OS=Popul... 63 1e-08 tr|Q23QC3|Q23QC3_TETTH Viral A-type inclusion protein repeat con... 49 2e-04 tr|Q6KA55|Q6KA55_ORYSJ Putative uncharacterized protein OJ1115_D... 42 0.031 tr|A5K3S4|A5K3S4_PLAVI Chloroquine resistance marker protein, pu... 42 0.041 tr|Q4S2J7|Q4S2J7_TETNG Chromosome 17 SCAF14760, whole genome sho... 41 0.053 tr|B2JPJ9|B2JPJ9_BURP8 Chromosome segregation ATPase-like protei... 41 0.069 tr|B7PXU8|B7PXU8_IXOSC CAP-Gly domain-containing linker protein,... 41 0.069 tr|Q6FY25|Q6FY25_CANGA Similar to uniprot|P32380 Saccharomyces c... 41 0.069 tr|Q5XBA5|Q5XBA5_STRP6 LPXTG anchored putative adhesin OS=Strept... 40 0.090 tr|Q6SZ55|Q6SZ55_STRPY LPXTG anchored putative adhesin (Surface ... 40 0.090 tr|B2V0K5|B2V0K5_CLOBA Putative viral A-type inclusion protein O... 40 0.12 tr|Q9AUR5|Q9AUR5_ORYSA Putative uncharacterized protein OSJNBb00... 40 0.12 tr|B8AQC9|B8AQC9_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.12 tr|Q9LFE5|Q9LFE5_ARATH Putative uncharacterized protein F5E19_60... 40 0.15 tr|Q2QMG9|Q2QMG9_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 40 0.15 tr|Q0WNW4|Q0WNW4_ARATH Putative uncharacterized protein At5g1672... 40 0.15 tr|B8BMW1|B8BMW1_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.15 tr|A3CJ80|A3CJ80_ORYSJ Putative uncharacterized protein OS=Oryza... 40 0.15 tr|Q7PNC2|Q7PNC2_ANOGA AGAP008015-PA OS=Anopheles gambiae GN=AGA... 40 0.15
>tr|A7Q109|A7Q109_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028255001 PE=4 SV=1 Length = 117
Score = 89.4 bits (220), Expect = 2e-16 Identities = 47/100 (47%), Positives = 68/100 (68%) Frame = +3
Query: 159 DDSEQKAALQERAMSAEMEASIQELRQKIDQFTQQVSGLLESVKAFFIETSSAFEERIVL 338 D E++ A S EME SI + +KI+ FTQ VS LLES K F + S+ FEER++L Sbjct: 14 DQIEEEETETNIAGSEEMELSINRILEKIENFTQLVSELLESGKTLFKDLSNEFEERMIL 73
Query: 339 LHQAQIDKWEEEIKLLGMIDSENEEMNFRLSNAQELLTSM 458 +H+ QI+KW+EEI+ L ++D+ NEE+N L NA+ LL ++ Sbjct: 74 IHKEQIEKWQEEIRELRLLDAANEEINAVLHNARCLLQNV 113
>tr|A5ATJ5|A5ATJ5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040168 PE=4 SV=1 Length = 157
Score = 89.4 bits (220), Expect = 2e-16 Identities = 47/100 (47%), Positives = 68/100 (68%) Frame = +3
Query: 159 DDSEQKAALQERAMSAEMEASIQELRQKIDQFTQQVSGLLESVKAFFIETSSAFEERIVL 338 D E++ A S EME SI + +KI+ FTQ VS LLES K F + S+ FEER++L Sbjct: 30 DQIEEEETETNIAGSEEMELSINRILEKIENFTQLVSELLESGKTLFKDLSNEFEERMIL 89
Query: 339 LHQAQIDKWEEEIKLLGMIDSENEEMNFRLSNAQELLTSM 458 +H+ QI+KW+EEI+ L ++D+ NEE+N L NA+ LL ++ Sbjct: 90 IHKEQIEKWQEEIRELRLLDAANEEINAVLHNARCLLQNI 129
>tr|A0S861|A0S861_TOBAC Knotted 1-binding protein 36 OS=Nicotiana tabacum GN=KNB36 PE=2 SV=1 Length = 135
Score = 85.1 bits (209), Expect = 3e-15 Identities = 46/102 (45%), Positives = 71/102 (69%), Gaps = 1/102 (0%) Frame = +3
Query: 156 ADDSEQKAALQERAMSAE-MEASIQELRQKIDQFTQQVSGLLESVKAFFIETSSAFEERI 332 A D+E++ AL M++E MEA I + +K++ FTQ VS LLES K+ E S+ FEER+ Sbjct: 30 AKDAEEEHALIPVPMASEQMEAEIANILEKMNHFTQHVSELLESGKSMLKELSNEFEERL 89
Query: 333 VLLHQAQIDKWEEEIKLLGMIDSENEEMNFRLSNAQELLTSM 458 + +H+ Q++KW+EEIK L ++D+ NEE + L NA+ LL ++ Sbjct: 90 IQIHKEQMEKWQEEIKELRLLDTANEEADALLLNAKYLLQNV 131
>tr|Q9LYY0|Q9LYY0_ARATH Putative uncharacterized protein F15A17_80 OS=Arabidopsis thaliana GN=F15A17_80 PE=4 SV=1 Length = 136
Score = 81.3 bits (199), Expect = 5e-14 Identities = 40/94 (42%), Positives = 61/94 (64%) Frame = +3
Query: 168 EQKAALQERAMSAEMEASIQELRQKIDQFTQQVSGLLESVKAFFIETSSAFEERIVLLHQ 347 E + A + S EME SI ++ KI+ FTQ VS LLE+ K E S+ FEER++++H+ Sbjct: 36 ENEEAETKLVASDEMELSIAQILDKIESFTQTVSNLLETGKTMLKELSNEFEERLIMIHK 95
Query: 348 AQIDKWEEEIKLLGMIDSENEEMNFRLSNAQELL 449 ++KW++EIK L ++D+ NEE L NA+ L+ Sbjct: 96 EHVEKWQDEIKELRLLDASNEETTSLLHNARYLI 129
>tr|Q8GY72|Q8GY72_ARATH Putative uncharacterized protein At5g03050/F15A17_80 (At5g03050) OS=Arabidopsis thaliana GN=At5g03050/F15A17_80 PE=2 SV=1 Length = 140
Score = 81.3 bits (199), Expect = 5e-14 Identities = 40/94 (42%), Positives = 61/94 (64%) Frame = +3
Query: 168 EQKAALQERAMSAEMEASIQELRQKIDQFTQQVSGLLESVKAFFIETSSAFEERIVLLHQ 347 E + A + S EME SI ++ KI+ FTQ VS LLE+ K E S+ FEER++++H+ Sbjct: 40 ENEEAETKLVASDEMELSIAQILDKIESFTQTVSNLLETGKTMLKELSNEFEERLIMIHK 99
Query: 348 AQIDKWEEEIKLLGMIDSENEEMNFRLSNAQELL 449 ++KW++EIK L ++D+ NEE L NA+ L+ Sbjct: 100 EHVEKWQDEIKELRLLDASNEETTSLLHNARYLI 133
>tr|Q10SW8|Q10SW8_ORYSJ Transposon protein, putative, unclassified, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g01840 PE=4 SV=1 Length = 158
Score = 71.2 bits (173), Expect = 5e-11 Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 1/112 (0%) Frame = +3
Query: 108 AHHGFATVEESTEKCEADDSEQKAALQE-RAMSAEMEASIQELRQKIDQFTQQVSGLLES 284 A G A + E +D A +E A SAE E +Q + ID FT+QVS +LE+ Sbjct: 35 ASSGVAVTITTAPMTETEDDMAVAEEEEVAAASAETEEHVQRILLAIDAFTRQVSEMLEA 94
Query: 285 VKAFFIETSSAFEERIVLLHQAQIDKWEEEIKLLGMIDSENEEMNFRLSNAQ 440 +A F ++ FE+R+ +H+ ++++WEEEI+ L D+ NE+ L NAQ Sbjct: 95 GRALFKNLAADFEDRLCSIHKERVERWEEEIRELRARDAANEQARSLLHNAQ 146
>tr|Q0DVX1|Q0DVX1_ORYSJ Os03g0108700 protein OS=Oryza sativa subsp. japonica GN=Os03g0108700 PE=4 SV=1 Length = 169
Score = 71.2 bits (173), Expect = 5e-11 Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 1/112 (0%) Frame = +3
Query: 108 AHHGFATVEESTEKCEADDSEQKAALQE-RAMSAEMEASIQELRQKIDQFTQQVSGLLES 284 A G A + E +D A +E A SAE E +Q + ID FT+QVS +LE+ Sbjct: 46 ASSGVAVTITTAPMTETEDDMAVAEEEEVAAASAETEEHVQRILLAIDAFTRQVSEMLEA 105
Query: 285 VKAFFIETSSAFEERIVLLHQAQIDKWEEEIKLLGMIDSENEEMNFRLSNAQ 440 +A F ++ FE+R+ +H+ ++++WEEEI+ L D+ NE+ L NAQ Sbjct: 106 GRALFKNLAADFEDRLCSIHKERVERWEEEIRELRARDAANEQARSLLHNAQ 157
>tr|Q84VE6|Q84VE6_ORYSJ Putative uncharacterized protein (Fragment) OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 148
Score = 70.5 bits (171), Expect = 8e-11 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 1/109 (0%) Frame = +3
Query: 117 GFATVEESTEKCEADDSEQKAALQE-RAMSAEMEASIQELRQKIDQFTQQVSGLLESVKA 293 G A + E +D A +E A SAE E +Q + ID FT+QVS +LE+ +A Sbjct: 28 GVAVTITTAPMTETEDDMAVAEEEEVAAASAETEEHVQRILLAIDAFTRQVSEMLEAGRA 87
Query: 294 FFIETSSAFEERIVLLHQAQIDKWEEEIKLLGMIDSENEEMNFRLSNAQ 440 F ++ FE+R+ +H+ ++++WEEEI+ L D+ NE+ L NAQ Sbjct: 88 LFKNLAADFEDRLCSIHKERVERWEEEIRELRARDAANEQARSLLHNAQ 136
>tr|A9S5U8|A9S5U8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_74974 PE=4 SV=1 Length = 235
Score = 70.5 bits (171), Expect = 8e-11 Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 5/114 (4%) Frame = +3
Query: 132 EESTEKCEADDSEQKAALQ-ERAMSAEMEASIQELRQKIDQFTQQVSGLLESVKAFFIET 308 ++ T K E D ++ A LQ E +S ME IQ+LR+++D FT QVSGLLE+ KA+F++ Sbjct: 64 KKDTPKKEED--KRGATLQNEVILSKAMEEDIQQLRERVDDFTHQVSGLLETGKAYFLDA 121
Query: 309 SSAFEERIV---LLHQAQID-KWEEEIKLLGMIDSENEEMNFRLSNAQELLTSM 458 S+AFEE I+ + +ID EEI+ L +D+ NEE+ RL A+ +L + Sbjct: 122 STAFEEGILQYPKMFLIEIDLSLSEEIEGLRNVDTVNEEICTRLREARIVLEKL 175
>tr|Q8H7P7|Q8H7P7_ORYSJ Putative uncharacterized protein OJ1384D03.14 (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=OJ1384D03.14 PE=4 SV=1 Length = 170
Score = 68.2 bits (165), Expect = 4e-10 Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 2/113 (1%) Frame = +3
Query: 108 AHHGFATVEESTEKCEADDSEQKAALQE-RAMSAEMEASIQELRQKIDQFT-QQVSGLLE 281 A G A + E +D A +E A SAE E +Q + ID FT QQVS +LE Sbjct: 46 ASSGVAVTITTAPMTETEDDMAVAEEEEVAAASAETEEHVQRILLAIDAFTRQQVSEMLE 105
Query: 282 SVKAFFIETSSAFEERIVLLHQAQIDKWEEEIKLLGMIDSENEEMNFRLSNAQ 440 + +A F ++ FE+R+ +H+ ++++WEEEI+ L D+ NE+ L NAQ Sbjct: 106 AGRALFKNLAADFEDRLCSIHKERVERWEEEIRELRARDAANEQARSLLHNAQ 158
|