DK961440
Clone id TST39A01NGRL0010_C03
Library
Length 280
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_C03. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GGCCTTTCAGCATGTCAGCCCGAATCGACTCTGATCACCAATTCTTCCCCTCCACTATGC
CTTGTATGTTGTTGCTTCCATGTCTTCTGCTGCCACTACCACTACTAGCAGGGTCCTGCT
TAAATTACACATTTGAAAATAAAACCCCATCCAGCGCAAGGACCATCATTACCGTCTCAG
CCTTCGATGAACTCTCCCGGAAAAAAACCGACCCATCCCATGCAAAACCCTATAGTGACT
GTTATTAACCCGTGTAAACTACGAATAATTAAGACCAGCA
■■Homology search results ■■ -
sp_hit_id Q8K4G1
Definition sp|Q8K4G1|LTBP4_MOUSE Latent-transforming growth factor beta-binding protein 4 OS=Mus musculus
Align length 38
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961440|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_C03, 5'
(280 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8K4G1|LTBP4_MOUSE Latent-transforming growth factor beta-bin... 31 2.2
sp|A8MZA4|GG6L6_HUMAN Putative golgin subfamily A member 6-like ... 31 2.2
sp|Q8N7Z2|GG6L1_HUMAN Golgin subfamily A member 6-like protein 1... 30 2.9
sp|Q8MTI2|BSL1_TRIVA Putative surface protein bspA-like OS=Trich... 30 3.7
sp|Q54TH6|Y9863_DICDI Probable serine/threonine-protein kinase D... 30 4.9
sp|Q8BRH4|MLL3_MOUSE Histone-lysine N-methyltransferase MLL3 OS=... 30 4.9
sp|P45561|AMEL_PIG Amelogenin OS=Sus scrofa GN=AMEL PE=1 SV=2 30 4.9
sp|Q99217|AMELX_HUMAN Amelogenin, X isoform OS=Homo sapiens GN=A... 30 4.9
sp|Q8ND04|CQ071_HUMAN UPF0487 protein C17orf71 OS=Homo sapiens G... 29 6.4
sp|Q99004|AMELY_BOVIN Amelogenin, Y isoform OS=Bos taurus GN=AME... 29 8.3

>sp|Q8K4G1|LTBP4_MOUSE Latent-transforming growth factor beta-binding
protein 4 OS=Mus musculus GN=Ltbp4 PE=2 SV=1
Length = 1666

Score = 30.8 bits (68), Expect = 2.2
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1

Query: 142 KPHPAQGPSLPSQPSMNSPGKKPTHPMQNPIVTVINPC 255
+P PSLP++P P ++P+ P Q P+ + C
Sbjct: 1188 QPQAPASPSLPARPPAPPPPRRPSPPRQGPVSSGRREC 1225


>sp|A8MZA4|GG6L6_HUMAN Putative golgin subfamily A member 6-like
protein 6 OS=Homo sapiens PE=5 SV=2
Length = 620

Score = 30.8 bits (68), Expect = 2.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1

Query: 130 HLKIKPHPAQGPSLPSQPSMNSPGKKPTHPMQN 228
HL PH P LP+ P + + PTHPM +
Sbjct: 18 HLPTHPHLPTHPHLPTHPHLPTHPHLPTHPMMS 50


>sp|Q8N7Z2|GG6L1_HUMAN Golgin subfamily A member 6-like protein 1
OS=Homo sapiens PE=2 SV=1
Length = 621

Score = 30.4 bits (67), Expect = 2.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1

Query: 130 HLKIKPHPAQGPSLPSQPSMNSPGKKPTHPMQN 228
HL PH P LP+ P + + PTHPM +
Sbjct: 14 HLPTHPHLPTHPHLPTHPHVPTHPHLPTHPMMS 46


>sp|Q8MTI2|BSL1_TRIVA Putative surface protein bspA-like
OS=Trichomonas vaginalis GN=BSPAL1 PE=4 SV=1
Length = 625

Score = 30.0 bits (66), Expect = 3.7
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 9/52 (17%)
Frame = +1

Query: 124 ITHLKIKPHPAQGPSLPSQP---------SMNSPGKKPTHPMQNPIVTVINP 252
ITH + + +P Q P+QP + N PG+ P+ P +NP NP
Sbjct: 436 ITHKQSEENPNQPGENPNQPGENPNQPGENPNQPGENPSQPGENPSQPGENP 487



Score = 29.3 bits (64), Expect = 6.4
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1

Query: 148 HPAQGPSLPSQP--SMNSPGKKPTHPMQNPIVTVINP 252
+P+Q PSQP + N PG+ P+ P +NP NP
Sbjct: 472 NPSQPGENPSQPGENPNQPGENPSQPGENPNQPGENP 508


>sp|Q54TH6|Y9863_DICDI Probable serine/threonine-protein kinase
DDB_G0281745 OS=Dictyostelium discoideum GN=DDB_G0281745
PE=3 SV=1
Length = 597

Score = 29.6 bits (65), Expect = 4.9
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1

Query: 157 QGPSLPSQPSMNSPGKKPTHPMQ 225
Q PS PS PS P ++PT P+Q
Sbjct: 171 QSPSRPSIPSFEPPTQQPTQPLQ 193


>sp|Q8BRH4|MLL3_MOUSE Histone-lysine N-methyltransferase MLL3 OS=Mus
musculus GN=Mll3 PE=2 SV=2
Length = 4903

Score = 29.6 bits (65), Expect = 4.9
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1

Query: 145 PHPAQGPSLPSQPSMNSPGKKPTHP 219
P P GPSL P N P K P HP
Sbjct: 2019 PDPYAGPSLTPAPLGNGPFKTPLHP 2043


>sp|P45561|AMEL_PIG Amelogenin OS=Sus scrofa GN=AMEL PE=1 SV=2
Length = 189

Score = 29.6 bits (65), Expect = 4.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1

Query: 130 HLKIKPHPAQGPSLPSQPSMNSPGKKPTHPMQN 228
H I PAQ P +P QP M PG+ P Q+
Sbjct: 83 HHHIPMVPAQQPGIPQQPMMPLPGQHSMTPTQH 115


>sp|Q99217|AMELX_HUMAN Amelogenin, X isoform OS=Homo sapiens
GN=AMELX PE=1 SV=1
Length = 191

Score = 29.6 bits (65), Expect = 4.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1

Query: 130 HLKIKPHPAQGPSLPSQPSMNSPGKKPTHPMQN 228
H I PAQ P +P QP M PG+ P+Q+
Sbjct: 82 HHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQH 114


>sp|Q8ND04|CQ071_HUMAN UPF0487 protein C17orf71 OS=Homo sapiens
GN=C17orf71 PE=1 SV=1
Length = 991

Score = 29.3 bits (64), Expect = 6.4
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +1

Query: 133 LKIKPHPAQGPSLPSQPSMNSPGKKPTHPMQNPIVTVINPCKL 261
LK++P Q P+ P +P +SP ++ H +++ I + ++
Sbjct: 275 LKVEPPRNQDPAHPDKPKKHSPKRRLQHALEDQIYRIFRKSRV 317


>sp|Q99004|AMELY_BOVIN Amelogenin, Y isoform OS=Bos taurus GN=AMELY
PE=2 SV=1
Length = 192

Score = 28.9 bits (63), Expect = 8.3
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
Frame = +1

Query: 139 IKPH------PAQGPSLPSQPSMNSPGKKPTHPMQN 228
++PH PAQ P +P QP M PG+ P+Q+
Sbjct: 80 LQPHHHNPMVPAQQPVVPQQPMMPVPGQHSMTPIQH 115


tr_hit_id A2ZYH8
Definition tr|A2ZYH8|A2ZYH8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica
Align length 27
Score (bit) 37.0
E-value 0.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961440|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_C03, 5'
(280 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A2ZYH8|A2ZYH8_ORYSJ Putative uncharacterized protein OS=Oryza... 37 0.50
tr|B6QED8|B6QED8_PENMA Response regulator, putative OS=Penicilli... 35 2.5
tr|B2AU52|B2AU52_PODAN Predicted CDS Pa_1_17970 OS=Podospora ans... 33 5.5
tr|A5V0L5|A5V0L5_ROSS1 Glycosyl transferase, group 1 OS=Roseifle... 33 7.2
tr|A7SA40|A7SA40_NEMVE Predicted protein (Fragment) OS=Nematoste... 33 7.2
tr|A2F6J9|A2F6J9_TRIVA Putative uncharacterized protein OS=Trich... 33 7.2

>tr|A2ZYH8|A2ZYH8_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_003600 PE=4 SV=1
Length = 341

Score = 37.0 bits (84), Expect = 0.50
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +1

Query: 136 KIKPHPAQGPSLPSQPSMNSPGKKPTH 216
++ PHPA LPS PSM PG++PTH
Sbjct: 247 QLPPHPAPDRLLPSAPSMVLPGRRPTH 273


>tr|B6QED8|B6QED8_PENMA Response regulator, putative OS=Penicillium
marneffei ATCC 18224 GN=PMAA_079660 PE=4 SV=1
Length = 537

Score = 34.7 bits (78), Expect = 2.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1

Query: 163 PSLPSQPSMNSPGKKPTHPMQNPIVTVINPCKLRIIK 273
PSLP+ P+ P + PTH + NP+V +P R K
Sbjct: 218 PSLPTPPAPAPPSESPTHAVLNPVVRTASPRPARRAK 254


>tr|B2AU52|B2AU52_PODAN Predicted CDS Pa_1_17970 OS=Podospora
anserina PE=4 SV=1
Length = 332

Score = 33.5 bits (75), Expect = 5.5
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1

Query: 151 PAQGPSLPSQPSMNSPGKKPTHPMQNP 231
P+ P LP++PS +SP + P HPM +P
Sbjct: 53 PSTCPPLPTRPSFSSPVRLPHHPMPHP 79


>tr|A5V0L5|A5V0L5_ROSS1 Glycosyl transferase, group 1 OS=Roseiflexus
sp. (strain RS-1) GN=RoseRS_4074 PE=4 SV=1
Length = 773

Score = 33.1 bits (74), Expect = 7.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1

Query: 142 KPHPAQGPSLPSQPSMNSPGKKPTHPMQNPIVTVINPC 255
KP P + P P P+ G P P P+V+++ PC
Sbjct: 14 KPTPVRFPPHPLDPARPVYGYAPADPSAQPVVSIVTPC 51


>tr|A7SA40|A7SA40_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g52570 PE=4 SV=1
Length = 314

Score = 33.1 bits (74), Expect = 7.2
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1

Query: 151 PAQGPSLPSQPSMNSPGKKPTHPMQNP 231
P+Q S P QP MN PG P+ P NP
Sbjct: 213 PSQPQSNPCQPGMNIPGCTPSQPQANP 239


>tr|A2F6J9|A2F6J9_TRIVA Putative uncharacterized protein
OS=Trichomonas vaginalis G3 GN=TVAG_052870 PE=4 SV=1
Length = 718

Score = 33.1 bits (74), Expect = 7.2
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = +1

Query: 145 PHPAQGPSLPSQPSMNSPGKKPTHPMQNPIVTVINPCK 258
P PAQ P P QP+ +P KP P Q P TV NP +
Sbjct: 302 PQPAQQP--PPQPAQPAPQPKPAQPAQQP--TVQNPAQ 335