BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961354|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_O04, 5'
         (287 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5UQU4|YR348_MIMIV Uncharacterized protein R348 OS=Acanthamoe...    32   0.75 
sp|Q99PP7|TRI33_MOUSE E3 ubiquitin-protein ligase TRIM33 OS=Mus ...    30   2.8  
sp|Q9UPN9|TRI33_HUMAN E3 ubiquitin-protein ligase TRIM33 OS=Homo...    30   3.7  
sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein ...    29   8.3  

>sp|Q5UQU4|YR348_MIMIV Uncharacterized protein R348 OS=Acanthamoeba
           polyphaga mimivirus GN=MIMI_R348 PE=4 SV=1
          Length = 705

 Score = 32.3 bits (72), Expect = 0.75
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 12/65 (18%)
 Frame = +1

Query: 22  SIIMMRSYASIFAPHN------------TSHAVASSIYGRLFLHNDGRASLYTPHQHLVL 165
           SI+ + +  +   PHN            +S  V +SI  ++ +HN    S+   +QH+V 
Sbjct: 275 SILSVSTNTTTILPHNNWLTVLVLPENSSSKIVFTSIENQVLIHNGQFYSIKNDYQHIVF 334

Query: 166 DELLI 180
           DE+LI
Sbjct: 335 DEILI 339


>sp|Q99PP7|TRI33_MOUSE E3 ubiquitin-protein ligase TRIM33 OS=Mus
           musculus GN=Trim33 PE=2 SV=2
          Length = 1142

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
 Frame = -3

Query: 198 SSGGGSNQQLVKN*VLMRGVQRCSP----IIVQEEATINGRSDSMGGVMGCEDRGVGPHH 31
           S GGGS    V         Q   P    ++V+EE    GR+ + GG  G +D GV    
Sbjct: 12  SGGGGSGSAPVTAGAAGPTAQEAEPPLAAVLVEEEEEEGGRAGAEGGAAGPDDGGVAAAS 71

Query: 30  DDAPP 16
             + P
Sbjct: 72  SSSAP 76


>sp|Q9UPN9|TRI33_HUMAN E3 ubiquitin-protein ligase TRIM33 OS=Homo
           sapiens GN=TRIM33 PE=1 SV=2
          Length = 1127

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = -3

Query: 198 SSGGGSNQQLVKN*VLMRGVQRCSP----IIVQEEATINGRSDSMGGVMGCEDRGV 43
           S GGGS    V         Q   P    ++V+EE    GR+ + GG  G +D GV
Sbjct: 12  SGGGGSGSAPVTAGAAGPAAQEAEPPLTAVLVEEEEEEGGRAGAEGGAAGPDDGGV 67


>sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2
           OS=Homo sapiens GN=SRRM2 PE=1 SV=2
          Length = 2752

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 2   LARRRGGASS*CGPTPLSSHPITPP 76
           LA R GG+      TPLS  P+ PP
Sbjct: 370 LAERHGGSPQPLATTPLSQEPVNPP 394

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961354|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_O04, 5'
         (287 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******