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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961234
Clone id TST39A01NGRL0009_I23
Library
Length 599
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_I23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GCGAAGAGGCAAAAACAAACCAGTTATTAAAAAAGCAATGGTGGAACTAGATGGTGCTCC
TTTCAAGAAGTTTGCGTCAGTGCGGCAGGAATGGGCTTTTGAAGATAGATTCTGCAGTCC
AGGTCCCATACAATTCACGGGTCCGACAGCAGAGGATACGAATTTCACATTGATGTTGGA
ACAAGGTTGTCAAGTTGTTTTTTAGACAAAGAAGTAGCCAGACATTTGATAAGAGTAGGC
GTTCAATTGAGGGCCCAGTCAAATAAATGCTCTGCGATCAAACGAGGGACAGCATGTGGT
GTCGCCAGATTGAAGAGTTAGGCTTCTTTTCATGAGTAAGCACTTCTGCACTTTGTGCTC
TGCCAATGGGACAGCTGCAGACTTAGCAGTTTTGTAATTTTTTTTCTGGGTCGTTGTGAA
CCGTTCGTTATTATGACTCTTTTGTTGGGTGTGCCAAGAGTAAAGCAAGCGTTGGGTATC
AGAGATGATTATTTTCATTTGCACATGAAGCCAAATGAGTGGATATAGGTTTTTGAGCAT
AGCGAAGGAGGCAGCTTTTTCCAAAGTTCGGTTTTTCGTTCAGTTTAACACTAGTCTTG
■■Homology search results ■■ -
sp_hit_id P21343
Definition sp|P21343|PFPB_SOLTU Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Solanum tuberosum
Align length 62
Score (bit) 92.4
E-value 2.0e-18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961234|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_I23, 5'
         (599 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P21343|PFPB_SOLTU Pyrophosphate--fructose 6-phosphate 1-phosp...    92   2e-18
sp|Q41141|PFPB_RICCO Pyrophosphate--fructose 6-phosphate 1-phosp...    91   3e-18
sp|Q41140|PFPA_RICCO Pyrophosphate--fructose 6-phosphate 1-phosp...    39   0.020
sp|P21342|PFPA_SOLTU Pyrophosphate--fructose 6-phosphate 1-phosp...    35   0.22 
sp|Q2GF50|SECA_EHRCR Protein translocase subunit secA OS=Ehrlich...    32   3.2  
sp|Q8HYY4|UACA_BOVIN Uveal autoantigen with coiled-coil domains ...    30   7.1  

>sp|P21343|PFPB_SOLTU Pyrophosphate--fructose 6-phosphate
           1-phosphotransferase subunit beta OS=Solanum tuberosum
           PE=1 SV=2
          Length = 552

 Score = 92.4 bits (228), Expect = 2e-18
 Identities = 43/62 (69%), Positives = 49/62 (79%)
 Frame = +2

Query: 2   RRGKNKPVIKKAMVELDGAPFKKFASVRQEWAFEDRFCSPGPIQFTGPTAEDTNFTLMLE 181
           R GK KPVIKKAMVEL+GAPFKKFAS R+EWA  +R+ +PGPIQF GP A   N TL+LE
Sbjct: 488 RHGKFKPVIKKAMVELEGAPFKKFASKREEWALNNRYINPGPIQFVGPVANKVNHTLLLE 547

Query: 182 QG 187
            G
Sbjct: 548 LG 549


>sp|Q41141|PFPB_RICCO Pyrophosphate--fructose 6-phosphate
           1-phosphotransferase subunit beta OS=Ricinus communis
           GN=PFP-BETA PE=3 SV=1
          Length = 552

 Score = 91.3 bits (225), Expect = 3e-18
 Identities = 42/62 (67%), Positives = 52/62 (83%)
 Frame = +2

Query: 2   RRGKNKPVIKKAMVELDGAPFKKFASVRQEWAFEDRFCSPGPIQFTGPTAEDTNFTLMLE 181
           R GK KPVIKKAMVEL+GAPFKKFAS+R+EWA ++R+ SPGPIQF GP ++  + TL+LE
Sbjct: 488 RHGKFKPVIKKAMVELEGAPFKKFASLREEWALKNRYVSPGPIQFMGPGSDAASHTLLLE 547

Query: 182 QG 187
            G
Sbjct: 548 LG 549


>sp|Q41140|PFPA_RICCO Pyrophosphate--fructose 6-phosphate
           1-phosphotransferase subunit alpha OS=Ricinus communis
           GN=PFP-ALPHA PE=3 SV=1
          Length = 617

 Score = 38.9 bits (89), Expect = 0.020
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +2

Query: 17  KPVIKKAMVELDGAPFKKFASVRQEWAFEDRFCSPGPIQFTGPTAEDTNFTLMLE 181
           KP I  A V+L G  ++       ++  +D + +PGP+QF GP A+    TL +E
Sbjct: 504 KPAIHPAAVDLKGKAYELLRLNAVKFLMDDLYRNPGPLQFEGPGADAKPITLCVE 558


>sp|P21342|PFPA_SOLTU Pyrophosphate--fructose 6-phosphate
           1-phosphotransferase subunit alpha OS=Solanum tuberosum
           PE=1 SV=1
          Length = 616

 Score = 35.4 bits (80), Expect = 0.22
 Identities = 16/54 (29%), Positives = 31/54 (57%)
 Frame = +2

Query: 20  PVIKKAMVELDGAPFKKFASVRQEWAFEDRFCSPGPIQFTGPTAEDTNFTLMLE 181
           P +  A V+L G  ++  +    ++  +D + +PGP+QF GP A+    +L++E
Sbjct: 505 PALHPATVDLRGKSYELLSQNATKFLLDDVYRNPGPLQFDGPGADAKAGSLVVE 558


>sp|Q2GF50|SECA_EHRCR Protein translocase subunit secA OS=Ehrlichia
           chaffeensis (strain Arkansas) GN=secA PE=3 SV=1
          Length = 862

 Score = 31.6 bits (70), Expect = 3.2
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
 Frame = -3

Query: 558 KAASFAMLKNL----YPLI---WLHVQMKIIISDTQRLLYSWHTQQKSHNNERFTTTQKK 400
           KA +F+ML+N+    Y LI     H++  I ++DTQR+ Y+ H   K   NE+      K
Sbjct: 796 KAEAFSMLENMMSKFYELIIQRLSHLKFDIELNDTQRIEYNIH-HSKISRNEKCPCGSGK 854

Query: 399 NYKTAKSA 376
            +K    A
Sbjct: 855 KFKHCHGA 862


>sp|Q8HYY4|UACA_BOVIN Uveal autoantigen with coiled-coil domains and
            ankyrin repeats protein OS=Bos taurus GN=UACA PE=1 SV=1
          Length = 1401

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = -3

Query: 555  AASFAMLKNLYPLIWLHVQMKIIISDTQRLLYSWHTQQKSHNNERFTTTQ-KKNYKTAKS 379
            AA   + K   PL  +    K +    + L     T+Q+ +  E+ T TQ ++  +  K+
Sbjct: 1087 AAQTLLQKQHVPLEQVESLKKSLSGTIETLKEELKTKQRCYEKEQQTVTQLRQMLENQKN 1146

Query: 378  AAVPLAEH 355
            ++VPLAEH
Sbjct: 1147 SSVPLAEH 1154
tr_hit_id A9T4E0
Definition tr|A9T4E0|A9T4E0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 65
Score (bit) 105.0
E-value 2.0e-21
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961234|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_I23, 5'
         (599 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9T4E0|A9T4E0_PHYPA Predicted protein OS=Physcomitrella paten...   105   2e-21
tr|A9SVF8|A9SVF8_PHYPA Predicted protein OS=Physcomitrella paten...   105   3e-21
tr|A9T8G2|A9T8G2_PHYPA Predicted protein OS=Physcomitrella paten...   104   4e-21
tr|A9YVC9|A9YVC9_9ROSI Pyrophosphate-dependent phosphofructokina...   101   4e-20
tr|Q9ZST3|Q9ZST3_CITPA Pyrophosphate-dependent phosphofructokina...   100   6e-20
tr|A7PX81|A7PX81_VITVI Chromosome chr12 scaffold_36, whole genom...   100   1e-19
tr|B4FQM2|B4FQM2_MAIZE Putative uncharacterized protein OS=Zea m...    97   7e-19
tr|Q654U8|Q654U8_ORYSJ Os06g0247500 protein OS=Oryza sativa subs...    96   1e-18
tr|A2YB91|A2YB91_ORYSI Putative uncharacterized protein OS=Oryza...    96   1e-18
tr|Q8W4M5|Q8W4M5_ARATH Similar to pyrophosphate-dependent phosph...    96   2e-18
tr|O65379|O65379_ARATH F12F1.13 protein OS=Arabidopsis thaliana ...    96   2e-18
tr|A7R2U5|A7R2U5_VITVI Chromosome undetermined scaffold_453, who...    96   2e-18
tr|O81437|O81437_ARATH T24H24.15 protein (Putative phosphofructo...    95   4e-18
tr|Q42197|Q42197_ARATH Pyrophosphate-fructose 6-P 1-phosphotrans...    93   1e-17
tr|Q2HTG9|Q2HTG9_MEDTR Pyrophosphate-dependent phosphofructokina...    93   1e-17
tr|A9P9M1|A9P9M1_POPTR Putative uncharacterized protein OS=Popul...    85   3e-15
tr|A6L2N1|A6L2N1_BACV8 Phosphofructokinase OS=Bacteroides vulgat...    74   6e-12
tr|B6W250|B6W250_9BACE Putative uncharacterized protein OS=Bacte...    74   6e-12
tr|B7B4X7|B7B4X7_9PORP Putative uncharacterized protein OS=Parab...    73   1e-11
tr|A7AK87|A7AK87_9PORP Putative uncharacterized protein OS=Parab...    73   1e-11
tr|A5ZHA3|A5ZHA3_9BACE Putative uncharacterized protein OS=Bacte...    73   1e-11
tr|A6DIS9|A6DIS9_9BACT Diphosphate--fructose-6-phosphate 1-phosp...    72   2e-11
tr|A6PU42|A6PU42_9BACT Diphosphate--fructose-6-phosphate 1-phosp...    72   2e-11
tr|A7LUZ9|A7LUZ9_BACOV Putative uncharacterized protein OS=Bacte...    72   3e-11
tr|B7AI79|B7AI79_9BACE Putative uncharacterized protein OS=Bacte...    71   5e-11
tr|B6WHS7|B6WHS7_9BACE Putative uncharacterized protein OS=Bacte...    71   5e-11
tr|B0NR18|B0NR18_BACSE Putative uncharacterized protein OS=Bacte...    71   5e-11
tr|A7V1F3|A7V1F3_BACUN Putative uncharacterized protein OS=Bacte...    71   5e-11
tr|Q8AB05|Q8AB05_BACTN Phosphofructokinase OS=Bacteroides thetai...    70   7e-11
tr|A6LC60|A6LC60_PARD8 Phosphofructokinase OS=Parabacteroides di...    70   9e-11

>tr|A9T4E0|A9T4E0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_218794 PE=4 SV=1
          Length = 567

 Score =  105 bits (263), Expect = 2e-21
 Identities = 50/65 (76%), Positives = 54/65 (83%)
 Frame = +2

Query: 2   RRGKNKPVIKKAMVELDGAPFKKFASVRQEWAFEDRFCSPGPIQFTGPTAEDTNFTLMLE 181
           R GKNKPVIKKAMVEL+GAPFKKFASVR  WA ED + SPGPIQF GPT++DTNFTL LE
Sbjct: 501 RNGKNKPVIKKAMVELNGAPFKKFASVRDAWAVEDSYVSPGPIQFAGPTSDDTNFTLKLE 560

Query: 182 QGCQV 196
            G  V
Sbjct: 561 LGAPV 565


>tr|A9SVF8|A9SVF8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_188815 PE=4 SV=1
          Length = 565

 Score =  105 bits (261), Expect = 3e-21
 Identities = 49/62 (79%), Positives = 54/62 (87%)
 Frame = +2

Query: 2   RRGKNKPVIKKAMVELDGAPFKKFASVRQEWAFEDRFCSPGPIQFTGPTAEDTNFTLMLE 181
           RRGKNKPVIKKAMVELDGAPFK FAS+R +WA ED + SPGPIQFTGPTA+DT +TL LE
Sbjct: 502 RRGKNKPVIKKAMVELDGAPFKTFASMRDQWAVEDSYISPGPIQFTGPTADDTCYTLKLE 561

Query: 182 QG 187
            G
Sbjct: 562 AG 563


>tr|A9T8G2|A9T8G2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_107676 PE=4 SV=1
          Length = 552

 Score =  104 bits (259), Expect = 4e-21
 Identities = 49/65 (75%), Positives = 54/65 (83%)
 Frame = +2

Query: 2   RRGKNKPVIKKAMVELDGAPFKKFASVRQEWAFEDRFCSPGPIQFTGPTAEDTNFTLMLE 181
           R+G+NKPVIKKAMVEL GAPFKKFASVR  WA ED + SPGPIQF GPTA++TNFTL LE
Sbjct: 486 RKGRNKPVIKKAMVELGGAPFKKFASVRDVWAVEDSYVSPGPIQFAGPTADETNFTLKLE 545

Query: 182 QGCQV 196
            G  V
Sbjct: 546 LGASV 550


>tr|A9YVC9|A9YVC9_9ROSI Pyrophosphate-dependent phosphofructokinase
           beta subunit OS=Citrus sinensis x Poncirus trifoliata
           PE=2 SV=1
          Length = 565

 Score =  101 bits (251), Expect = 4e-20
 Identities = 48/65 (73%), Positives = 53/65 (81%)
 Frame = +2

Query: 2   RRGKNKPVIKKAMVELDGAPFKKFASVRQEWAFEDRFCSPGPIQFTGPTAEDTNFTLMLE 181
           R GK KPVIKKAMVELDGAPFKKF S+R EWA  +R+ SPGPIQFTGPT+ D N TL+LE
Sbjct: 501 RHGKFKPVIKKAMVELDGAPFKKFVSMRDEWALNNRYISPGPIQFTGPTSGDVNNTLLLE 560

Query: 182 QGCQV 196
            G QV
Sbjct: 561 LGAQV 565


>tr|Q9ZST3|Q9ZST3_CITPA Pyrophosphate-dependent phosphofructokinase
           beta subunit OS=Citrus paradisi GN=PPi-PFKb PE=2 SV=1
          Length = 566

 Score =  100 bits (249), Expect = 6e-20
 Identities = 47/65 (72%), Positives = 52/65 (80%)
 Frame = +2

Query: 2   RRGKNKPVIKKAMVELDGAPFKKFASVRQEWAFEDRFCSPGPIQFTGPTAEDTNFTLMLE 181
           R GK KPVIKKAMVELDG PFKKF S+R EWA  +R+ SPGPIQFTGPT+ D N TL+LE
Sbjct: 502 RHGKFKPVIKKAMVELDGTPFKKFVSMRDEWALNNRYISPGPIQFTGPTSGDVNHTLLLE 561

Query: 182 QGCQV 196
            G QV
Sbjct: 562 LGAQV 566


>tr|A7PX81|A7PX81_VITVI Chromosome chr12 scaffold_36, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00025935001
           PE=4 SV=1
          Length = 563

 Score = 99.8 bits (247), Expect = 1e-19
 Identities = 46/64 (71%), Positives = 53/64 (82%)
 Frame = +2

Query: 2   RRGKNKPVIKKAMVELDGAPFKKFASVRQEWAFEDRFCSPGPIQFTGPTAEDTNFTLMLE 181
           R GK KPVIKKAMVEL+GAPFKKFAS+R EWA ++R+ SPGP+QF GPTA + N TLMLE
Sbjct: 499 RHGKFKPVIKKAMVELEGAPFKKFASLRDEWALKNRYVSPGPVQFVGPTANEINHTLMLE 558

Query: 182 QGCQ 193
            G Q
Sbjct: 559 LGAQ 562


>tr|B4FQM2|B4FQM2_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 564

 Score = 97.1 bits (240), Expect = 7e-19
 Identities = 44/65 (67%), Positives = 55/65 (84%)
 Frame = +2

Query: 2   RRGKNKPVIKKAMVELDGAPFKKFASVRQEWAFEDRFCSPGPIQFTGPTAEDTNFTLMLE 181
           R GK KPVIKKAMVELD APFKK+AS+R EWA ++R+ SPGPIQF+GP ++D+N TLMLE
Sbjct: 500 RHGKFKPVIKKAMVELDAAPFKKYASLRDEWAIKNRYISPGPIQFSGPGSDDSNHTLMLE 559

Query: 182 QGCQV 196
            G ++
Sbjct: 560 LGAEL 564


>tr|Q654U8|Q654U8_ORYSJ Os06g0247500 protein OS=Oryza sativa subsp.
           japonica GN=OJ1136_C11.21 PE=4 SV=1
          Length = 567

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 44/64 (68%), Positives = 52/64 (81%)
 Frame = +2

Query: 2   RRGKNKPVIKKAMVELDGAPFKKFASVRQEWAFEDRFCSPGPIQFTGPTAEDTNFTLMLE 181
           R GK KPVIKKAMVELDGAPFKKFAS+R EW+ ++ + SPGPIQF+GP + D N TLMLE
Sbjct: 503 RHGKYKPVIKKAMVELDGAPFKKFASLRDEWSLKNHYISPGPIQFSGPGSNDANHTLMLE 562

Query: 182 QGCQ 193
            G +
Sbjct: 563 LGAE 566


>tr|A2YB91|A2YB91_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_22368 PE=4 SV=1
          Length = 567

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 44/64 (68%), Positives = 52/64 (81%)
 Frame = +2

Query: 2   RRGKNKPVIKKAMVELDGAPFKKFASVRQEWAFEDRFCSPGPIQFTGPTAEDTNFTLMLE 181
           R GK KPVIKKAMVELDGAPFKKFAS+R EW+ ++ + SPGPIQF+GP + D N TLMLE
Sbjct: 503 RHGKYKPVIKKAMVELDGAPFKKFASLRDEWSLKNHYISPGPIQFSGPGSNDANHTLMLE 562

Query: 182 QGCQ 193
            G +
Sbjct: 563 LGAE 566


>tr|Q8W4M5|Q8W4M5_ARATH Similar to pyrophosphate-dependent
           phosphofuctokinase beta subunit OS=Arabidopsis thaliana
           GN=At1g12000/F12F1.13 PE=2 SV=1
          Length = 566

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 44/64 (68%), Positives = 54/64 (84%)
 Frame = +2

Query: 2   RRGKNKPVIKKAMVELDGAPFKKFASVRQEWAFEDRFCSPGPIQFTGPTAEDTNFTLMLE 181
           R GK KPVIKKAMVEL+GAPFKKFAS+R+EWA ++R+ SPGPIQFTGP ++  + TL+LE
Sbjct: 503 RHGKFKPVIKKAMVELEGAPFKKFASLREEWALKNRYISPGPIQFTGPGSDSLSHTLLLE 562

Query: 182 QGCQ 193
            G Q
Sbjct: 563 LGAQ 566