DK961188
Clone id TST39A01NGRL0009_G23
Library
Length 630
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_G23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GTTATCTCAATGTAATTTTTTTTTTTTTTTGAAACAAAGGGAGATCCACGCAATTCCGCT
CTAATGCTACATTGGGACGGTTTTCAAGCCACCTCAACAACGGTGAAAGACAGTGCTGTG
GTTGAGATAGTGGTGCTCAATGGAGGTAAAAGATCAGTTGTGGGATCTTTACCTGTATTA
TTTTTACCTCTCTCACATAAAGACTTGGAGAGAAAGCACAATGACATCCTTGGCTCTTTC
TTGCATCCCTTATTTCTTGATCTAGAACGATCTTTTTTGGAGGGTTTTGATGTGAATTAT
GCTTATCTTGCGAATGACATCAACGACAAAATACAAGGTGGAAGAGTGAAATTGAGGAGT
ATGCTTATGTTATGCGCAGGAGACCACCCTGCACAATGCAAGTTAGGACAGGTTAAAGAT
GGAGGAATGAGCTTTTGTAGACGAGATATTCCCAAAGCAACTTTTCTCGATGATCGCTAT
GTCTATGATGCAAATCGATATCAAGGTAGATATCCGCCAAAAAAACGGCGAGTTGAGGAT
ATGTGGAATAGCATCCGACAATCCAAAAGATGCATGACAAAGGAGAGAAAGGAGGAAATC
CTCAGAGATGGAGGACTTTTGGGCGAATCT
■■Homology search results ■■ -
sp_hit_id Q6KZJ6
Definition sp|Q6KZJ6|APGM_PICTO 2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Picrophilus torridus
Align length 65
Score (bit) 32.7
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961188|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_G23, 5'
(600 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6KZJ6|APGM_PICTO 2,3-bisphosphoglycerate-independent phospho... 33 1.5
sp|P47505|Y263_MYCGE Uncharacterized protein MG263 OS=Mycoplasma... 32 1.9
sp|O94441|YPP1_SCHPO Putative cargo-transport protein ypp1 OS=Sc... 31 5.5
sp|P55220|VRP2_SALEN 65 kDa virulence protein OS=Salmonella ente... 30 9.4
sp|P24419|VRP2_SALDU 65 kDa virulence protein OS=Salmonella dubl... 30 9.4

>sp|Q6KZJ6|APGM_PICTO 2,3-bisphosphoglycerate-independent
phosphoglycerate mutase OS=Picrophilus torridus GN=apgM
PE=3 SV=1
Length = 402

Score = 32.7 bits (73), Expect = 1.5
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = +1

Query: 184 KHNDILGSFLHPLFLDLERSFLEGFDVNYAYLANDINDKIQGGRVKLRSMLMLCAGDHPA 363
K DI G P D++RS +E D + + ND++D +L++ GDH
Sbjct: 295 KGTDIAGHDRRP---DIKRSVIENVDSAISKIINDLDD-----------LLIIVTGDHST 340

Query: 364 QCKLG 378
C LG
Sbjct: 341 PCNLG 345


>sp|P47505|Y263_MYCGE Uncharacterized protein MG263 OS=Mycoplasma
genitalium GN=MG263 PE=3 SV=1
Length = 291

Score = 32.3 bits (72), Expect = 1.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1

Query: 388 DGGMSFCRRDIPKATFLDDRYVYDANRYQGRYPPKKRRVEDMWNS 522
DG + F + +I T+LDDR++ N R+P ++ W S
Sbjct: 84 DGAIIFYQNEILSQTYLDDRFIEGINNIVKRFPEAAYKLNSGWIS 128


>sp|O94441|YPP1_SCHPO Putative cargo-transport protein ypp1
OS=Schizosaccharomyces pombe GN=ypp1 PE=1 SV=1
Length = 862

Score = 30.8 bits (68), Expect = 5.5
Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +1

Query: 163 SHKDLERKHNDILGSF--LHPLFLDLERSFLE 252
SH+ L RK++D+ GSF + P+F+D +S +E
Sbjct: 375 SHERLARKNSDVAGSFSDIKPVFVDEPKSIIE 406


>sp|P55220|VRP2_SALEN 65 kDa virulence protein OS=Salmonella
enteritidis GN=spvB PE=1 SV=1
Length = 591

Score = 30.0 bits (66), Expect = 9.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +1

Query: 97 IVVLNGGKRSVVGSLPVLFLPLSHKDLERKHNDILGSFLHPLFLDLERSFLEGFDVNYA 273
+++LNG + + + FLP K L + D L S PL + ER F ++Y+
Sbjct: 1 MLILNGFSSATLALITPPFLPKGGKALSQSGPDGLASITLPLPISAERGFAPALALHYS 59


>sp|P24419|VRP2_SALDU 65 kDa virulence protein OS=Salmonella dublin
GN=vsdC PE=3 SV=1
Length = 593

Score = 30.0 bits (66), Expect = 9.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +1

Query: 97 IVVLNGGKRSVVGSLPVLFLPLSHKDLERKHNDILGSFLHPLFLDLERSFLEGFDVNYA 273
+++LNG + + + FLP K L + D L S PL + ER F ++Y+
Sbjct: 1 MLILNGFSSATLALITPPFLPKGGKALSQSGPDGLASITLPLPISAERGFAPALALHYS 59


tr_hit_id A7S850
Definition tr|A7S850|A7S850_NEMVE Predicted protein OS=Nematostella vectensis
Align length 171
Score (bit) 82.8
E-value 1.0e-14
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961188|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_G23, 5'
(600 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7S850|A7S850_NEMVE Predicted protein OS=Nematostella vectens... 83 1e-14
tr|A7SPB0|A7SPB0_NEMVE Predicted protein OS=Nematostella vectens... 73 1e-11
tr|A7SY70|A7SY70_NEMVE Predicted protein OS=Nematostella vectens... 70 7e-11
tr|A9RQQ0|A9RQQ0_PHYPA Predicted protein OS=Physcomitrella paten... 51 6e-05
tr|A9BD49|A9BD49_PROM4 Glutamine--fructose-6-phosphate transamin... 33 9.8
tr|A8F7K1|A8F7K1_THELT Glycoside hydrolase family 2 sugar bindin... 33 9.8
tr|B4M863|B4M863_DROVI GJ16662 OS=Drosophila virilis GN=GJ16662 ... 33 9.8

>tr|A7S850|A7S850_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g208262 PE=4 SV=1
Length = 868

Score = 82.8 bits (203), Expect = 1e-14
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 5/171 (2%)
Frame = +1

Query: 7 KGDPRNSALMLHWDGFQATSTTVKDSAVVEIVVLNGGK--RSVVGSLPVL-FLPLSHKDL 177
+G P N AL+ HWDG+Q ST+ + +E+ +LN K RS + + V+ F+P + +
Sbjct: 201 RGSPLNLALIGHWDGWQPFSTSGRSCGSLEVSILNMFKTDRSHIDEVYVIGFVPCT--TV 258

Query: 178 ERKHNDILGSFLHPLFLDLERSFLEGFDVNYAYLANDINDKIQGGRVKLRSMLMLCAGDH 357
+ + F+ PL DL F+ GF+V Y A + D +R ML+ A DH
Sbjct: 259 PKGVPEAYDPFIQPLINDLCDGFIHGFEVPYPSNAITVPDYEAHEIETVRVMLLCWAADH 318

Query: 358 PAQCKLGQVKDGGMSFCRR--DIPKATFLDDRYVYDANRYQGRYPPKKRRV 504
P QC+ G+ + G CRR + + + Y Y NR+ R+P +KR V
Sbjct: 319 PGQCEFGKYLNQGKCACRRCKMVGQQSLQSTHYYYGDNRFHARHPWEKRDV 369


>tr|A7SPB0|A7SPB0_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g246549 PE=4 SV=1
Length = 645

Score = 73.2 bits (178), Expect = 1e-11
Identities = 49/140 (35%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Frame = +1

Query: 4 TKGDPRNSALMLHWDGFQATSTTVKDSAVVEIVVLNGGK--RSVVGSLPVL-FLPLSHKD 174
T G P N AL+ HWDG+QA S++ + +E+ + N K RS + V+ F+PLS
Sbjct: 131 TNGSPINIALIGHWDGWQAFSSSTRSCGSLEVSIANMKKADRSHTSEVYVVGFVPLSSTP 190

Query: 175 LERKHNDILGSFLHPLFLDLERSFLEGFDVNYAYLANDINDKIQGGRVKLRSMLMLCAGD 354
K + FL PL D+ F+ GF+V L + N K ++R +L+ +GD
Sbjct: 191 ---KLPETYDPFLQPLMEDICEGFINGFEVR---LPQEPNMK------RVRVLLLCWSGD 238

Query: 355 HPAQCKLGQVKDGGMSFCRR 414
HP QC++G++ + G CRR
Sbjct: 239 HPGQCEVGKLLNQGKCACRR 258


>tr|A7SY70|A7SY70_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g219377 PE=4 SV=1
Length = 399

Score = 70.5 bits (171), Expect = 7e-11
Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Frame = +1

Query: 4 TKGDPRNSALMLHWDGFQATSTTVKDSAVVEIVVLNGGK--RSVVGSLPVL-FLPLSHKD 174
T G P N AL+ +WDG+QA S++ + +E+ + N K RS + V+ F+PLS
Sbjct: 131 TNGSPINIALIGNWDGWQAFSSSTRSCGSLEVSIANMKKADRSHTSEVYVVGFVPLSSTP 190

Query: 175 LERKHNDILGSFLHPLFLDLERSFLEGFDVNYAYLANDINDKIQGGRVKLRSMLMLCAGD 354
K + FL PL D+ F+ GF+V L + N K ++R +L+ +GD
Sbjct: 191 ---KLQETYDPFLQPLMEDICEGFINGFEVR---LPQEPNMK------RVRVLLLCWSGD 238

Query: 355 HPAQCKLGQVKDGGMSFCRR 414
HP QC++G++ + G CRR
Sbjct: 239 HPGQCEVGKLLNQGKCPCRR 258


>tr|A9RQQ0|A9RQQ0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_69357 PE=4 SV=1
Length = 496

Score = 50.8 bits (120), Expect = 6e-05
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Frame = +1

Query: 310 GRVKLRSMLMLCAGDHPAQCKLGQVKDGGMSFCRRDIPKATFLDDR---YVYDANRYQGR 480
G+V +R +LML GDHPAQCK+ ++K G S R+ A + R YV N Q
Sbjct: 334 GKVNIRGILMLVTGDHPAQCKIAKLKQSGRSAGRQCKMHAALSNARAPSYVCGKNHEQFH 393

Query: 481 YPPKKRRVEDMWNSIRQSKRCMTKERK--EEILRDGGLLGES 600
P+K+ ++ + S+ R R + + G++GES
Sbjct: 394 IMPQKQTSKEFFASVCNLNRIPHSSRGACKRFSQATGIIGES 435


>tr|A9BD49|A9BD49_PROM4 Glutamine--fructose-6-phosphate transaminase
(Isomerizing) OS=Prochlorococcus marinus (strain MIT
9211) GN=glmS PE=4 SV=1
Length = 634

Score = 33.5 bits (75), Expect = 9.8
Identities = 25/102 (24%), Positives = 45/102 (44%)
Frame = +1

Query: 154 LPLSHKDLERKHNDILGSFLHPLFLDLERSFLEGFDVNYAYLANDINDKIQGGRVKLRSM 333
+P KDL ++HN + S H F D E G +NY G +KL+ +
Sbjct: 467 IPKQLKDLVKEHNQLAESLAH-RFADTEDVIFLGRGINYPIALE--------GALKLKEI 517

Query: 334 LMLCAGDHPAQCKLGQVKDGGMSFCRRDIPKATFLDDRYVYD 459
+ A +PA G++K G ++ + +P + + V++
Sbjct: 518 SYIHAEGYPA----GEMKHGPIALLDQRVPVISIATEGIVFE 555


>tr|A8F7K1|A8F7K1_THELT Glycoside hydrolase family 2 sugar binding
OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385
/ TMO) GN=Tlet_1581 PE=4 SV=1
Length = 791

Score = 33.5 bits (75), Expect = 9.8
Identities = 42/168 (25%), Positives = 64/168 (38%), Gaps = 28/168 (16%)
Frame = +1

Query: 46 DGFQATSTTVKDSAVVEIVVLNGGKRSVVGSLPVLFLPLSHKDLERKHNDILGSFL---- 213
D FQ T + ++LNG + G+L F P++H L K ND+L L
Sbjct: 229 DRFQTTFGIRSIDVDEDRILLNGEPVYIFGALDQNFYPVNHYTLPEK-NDLLSELLKAKE 287

Query: 214 -------------HPLFLDL--ERSFLEGFDVNYAYLANDINDKIQGGRVKLRSMLMLCA 348
L+L++ E L D+ Y A +N+K G KL L+
Sbjct: 288 MGLNLLRFHVKIPDDLYLEIADELGLLIWIDLPY---ARQLNEKSMGYLEKLLENLLKRH 344

Query: 349 GDHPAQCKLGQVKDG---------GMSFCRRDIPKATFLDDRYVYDAN 465
+HP+ L + + S+ + KA LDD +Y N
Sbjct: 345 ANHPSFVLLSLINESWGVDLSEEQTRSWLKMFFRKAKVLDDTRLYVDN 392


>tr|B4M863|B4M863_DROVI GJ16662 OS=Drosophila virilis GN=GJ16662
PE=4 SV=1
Length = 572

Score = 33.5 bits (75), Expect = 9.8
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1

Query: 325 RSMLMLCAGDHPAQCKLGQVKDGGMSFCRRDIPKATFLDDRYVYDANRYQGRYPPKKRRV 504
R+ L+L A C L D +S C R PK + +RY ++ R +G +P RR+
Sbjct: 399 RTALILVDRSELAVCALFACLDEQLSSCGRIYPKHIDVANRYYFERIRIEGHFPAAARRL 458