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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961134
Clone id TST39A01NGRL0009_E17
Library
Length 635
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_E17. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
AGAGGCTGGCAGGCAGCTAGCTGATAGCCGCAATTCTAATCTCTATAGTACTGCGGCTAT
ATTAGGTTTCCATCAATAATCTAGCTGAAGGTTTTCGTTTTTGGGATCTATCCTTTTCTT
CTTGTGAATTTCGGTTTACCTATAATTATACTCATGGCCAACCGAGTCCCCCTGGTGATC
GCTGTGCTGGGCTTGCTACTTGTGTTATCTATGGTTAGCACCATCGCAGAGGCCAAGAAG
AAGCCCAAGAAGCTATCCTTCTTCATGTTCATTGCCGTGCAAAACAATAGCTTTCTGGAC
AACCCCAACGGGCAGTTCACGGCCGTGCTGTCCGGCGAGGCCCCCGTGACGCCGCAGCCC
TTCGCCTTCGGCAATCTGCACACCTTTGACAATCCGCTGTCCAAGACGATGTCACTGGCC
AATCCGGCCGACAGGGTTGGCCACGTGCAGGGTTGGTACGGCAATTGCGGGCAGTCGGCG
CTGACACTGTGCCTGACGCAGACGTTTGCATACAATGACAGCGTCTATGCTGGCACCTTC
TCGCTCTTGGGGAGTGGCGTTGCGTTCGATCCAGTGAAGTACGCGCCCATCGTGGGCGGC
ACCGGAGACTTCGCCTTCTGCCGCGGGGTGGCAGA
■■Homology search results ■■ -
sp_hit_id P13240
Definition sp|P13240|DR206_PEA Disease resistance response protein 206 OS=Pisum sativum
Align length 138
Score (bit) 58.2
E-value 4.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961134|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_E17, 5'
         (635 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13240|DR206_PEA Disease resistance response protein 206 OS=P...    58   4e-08
sp|A8G9K9|DNAJ_SERP5 Chaperone protein dnaJ OS=Serratia proteama...    30   8.0  

>sp|P13240|DR206_PEA Disease resistance response protein 206
           OS=Pisum sativum GN=PI206 PE=2 SV=2
          Length = 184

 Score = 58.2 bits (139), Expect = 4e-08
 Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
 Frame = +1

Query: 235 KKKP----KKLSFFMFIAVQNNSFLDNPNGQFTAVLSGEAPVTPQPFA-FGNLHTFDNPL 399
           K+KP    K L F+    + N     N      A   G +     P + FGN+  FD+P+
Sbjct: 24  KRKPYKPCKNLVFYFHDILYNGKNAANATSAIVAAPEGVSLTKLAPQSHFGNIIVFDDPI 83

Query: 400 SKTMSLANPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDSVYAGTFSLLGSGVAFDPVK 579
           + + SL++   +VG  QG+Y    ++  T  L+ TF  N + + GT +  G+       +
Sbjct: 84  TLSHSLSSK--QVGRAQGFYIYDTKNTYTSWLSFTFVLNSTHHQGTITFAGADPIVAKTR 141

Query: 580 YAPIVGGTGDFAFCRGVA 633
              + GGTGDF   RG+A
Sbjct: 142 DISVTGGTGDFFMHRGIA 159


>sp|A8G9K9|DNAJ_SERP5 Chaperone protein dnaJ OS=Serratia
           proteamaculans (strain 568) GN=dnaJ PE=3 SV=1
          Length = 375

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = -1

Query: 395 GLSKVCRLPKAKGCGV---TGASPDSTAVNCP 309
           G++K  R+P  + CGV   +GA P S+ V CP
Sbjct: 130 GVTKEIRIPTLEECGVCHGSGAKPGSSPVTCP 161
tr_hit_id A7P031
Definition tr|A7P031|A7P031_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera
Align length 130
Score (bit) 65.1
E-value 3.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961134|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_E17, 5'
         (635 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7P031|A7P031_VITVI Chromosome chr6 scaffold_3, whole genome ...    65   3e-09
tr|A2ZC31|A2ZC31_ORYSI Putative uncharacterized protein OS=Oryza...    65   3e-09
tr|A7P884|A7P884_VITVI Chromosome chr3 scaffold_8, whole genome ...    64   6e-09
tr|Q53NP4|Q53NP4_ORYSJ Dirigent-like protein OS=Oryza sativa sub...    63   1e-08
tr|A9PBN6|A9PBN6_POPTR Putative uncharacterized protein OS=Popul...    63   1e-08
tr|A7P030|A7P030_VITVI Chromosome chr6 scaffold_3, whole genome ...    63   2e-08
tr|A5B702|A5B702_VITVI Putative uncharacterized protein OS=Vitis...    63   2e-08
tr|A9PCN5|A9PCN5_POPTR Putative uncharacterized protein OS=Popul...    62   2e-08
tr|A7P032|A7P032_VITVI Chromosome chr6 scaffold_3, whole genome ...    62   4e-08
tr|A5BN88|A5BN88_VITVI Putative uncharacterized protein (Fragmen...    61   5e-08
tr|Q9T017|Q9T017_ARATH Putative disease resistance response prot...    61   6e-08
tr|Q9C523|Q9C523_ARATH Dirigent protein, putative (At1g58170) (P...    61   6e-08
tr|A9PD67|A9PD67_POPTR Putative uncharacterized protein OS=Popul...    60   1e-07
tr|A5BDJ0|A5BDJ0_VITVI Putative uncharacterized protein OS=Vitis...    60   1e-07
tr|A5AKQ8|A5AKQ8_VITVI Putative uncharacterized protein OS=Vitis...    60   1e-07
tr|Q1KPV7|Q1KPV7_9CARY Dirigent-related protein OS=Tamarix andro...    60   1e-07
tr|Q9SKQ3|Q9SKQ3_ARATH Putative disease resistance response prot...    59   2e-07
tr|Q9SDR7|Q9SDR7_FORIN Dirigent protein OS=Forsythia intermedia ...    59   2e-07
tr|Q9SDR6|Q9SDR6_FORIN Dirigent protein OS=Forsythia intermedia ...    59   2e-07
tr|Q84TH6|Q84TH6_ARATH Putative disease resistance response prot...    59   2e-07
tr|A7P028|A7P028_VITVI Chromosome chr6 scaffold_3, whole genome ...    59   2e-07
tr|Q9SDR5|Q9SDR5_THUPL Dirigent-like protein OS=Thuja plicata GN...    59   2e-07
tr|A7PW07|A7PW07_VITVI Chromosome chr8 scaffold_34, whole genome...    59   3e-07
tr|A7P029|A7P029_VITVI Chromosome chr6 scaffold_3, whole genome ...    59   3e-07
tr|A7P024|A7P024_VITVI Chromosome chr6 scaffold_3, whole genome ...    59   3e-07
tr|A5BAW0|A5BAW0_VITVI Putative uncharacterized protein OS=Vitis...    59   3e-07
tr|Q9T019|Q9T019_ARATH Putative disease resistance response prot...    58   4e-07
tr|Q27J95|Q27J95_PICSI Dirigent-like protein pDIR17 OS=Picea sit...    58   4e-07
tr|A7PW02|A7PW02_VITVI Chromosome chr8 scaffold_34, whole genome...    58   4e-07
tr|B6TFK6|B6TFK6_MAIZE Disease resistance response protein 206 O...    58   5e-07

>tr|A7P031|A7P031_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024747001
           PE=4 SV=1
          Length = 195

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
 Frame = +1

Query: 241 KPKKLSFFMFIAVQNNSFLDNPNGQFTAVLSGEAPVTPQPFAFGNLHTFDNPLSKTMSLA 420
           + +KLS F F       + DN +G+    +   AP T    AFG ++  DNPL+    L+
Sbjct: 47  RKEKLSHFRFY------WHDNVSGRNPTSIQVVAPPTNSTTAFGLVNMIDNPLTIEPKLS 100

Query: 421 NPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDSVYAG-TFSLLGSGVAFDPVKYAPIVG 597
           +    VG  QG Y +  Q  + L +   FA+ D  Y G TF++LG    F  V+   ++ 
Sbjct: 101 SKM--VGKAQGLYTSASQEEIGLLMIMNFAFFDGKYNGSTFTVLGRNTVFSKVREMSVIS 158

Query: 598 GTGDFAFCRG 627
           G+G F F RG
Sbjct: 159 GSGLFRFARG 168


>tr|A2ZC31|A2ZC31_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_35336 PE=4 SV=1
          Length = 178

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
 Frame = +1

Query: 304 PNGQFTAVLSGEAPVT-PQPFAFGNLHTFDNPLSKTMSLANPADRVGHVQGWYGNCGQSA 480
           PN     V   EAP +      FG ++  D+PL+   SL  P+  VGHVQG Y + G+  
Sbjct: 45  PNSMVAKV--AEAPTSRASATVFGTVYVIDDPLTDGPSLTAPSRLVGHVQGMYVSAGKET 102

Query: 481 LTLCLTQTFAY-NDSVYAGTFSLLGSGVAFDPVKYAPIVGGTGDFAFCRG 627
           ++L +  +F +  D  Y G+   +       PV+  P+VGGTG F F RG
Sbjct: 103 MSLLMAMSFVFAADEPYNGSSVAIFGPNPARPVREIPVVGGTGAFRFARG 152


>tr|A7P884|A7P884_VITVI Chromosome chr3 scaffold_8, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00036083001
           PE=4 SV=1
          Length = 365

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
 Frame = +1

Query: 319 TAVLSGEAPVTPQ-PFAFGNLHTFDNPLSKTMSLANPADRVGHVQGWYGNCGQSALTLCL 495
           TAV   +A  T + P  FG L   D+PL++   L++    VG  QG YG+  Q    L +
Sbjct: 55  TAVRVAQASQTDKSPTLFGALLMADDPLTEGPDLSSKL--VGRAQGLYGSASQEGFGLIM 112

Query: 496 TQTFAYNDSVYAGT-FSLLGSGVAFDPVKYAPIVGGTGDFAFCRGVA 633
             ++ + D +Y G+  S+LG   A +PV+  P+VGGTG F   RG A
Sbjct: 113 ALSYGFCDGIYNGSSISVLGLNQALNPVRELPVVGGTGVFRMARGFA 159



 Score = 51.2 bits (121), Expect = 5e-05
 Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 2/175 (1%)
 Frame = +1

Query: 112 PFLLVNFGLPIIILMANRXXXXXXXXXXXXXXXXXSTIAEAKKKPKKLSFFMFIAVQNNS 291
           P  L+ F L I + MA+                    +  AK++  +L F+         
Sbjct: 185 PLFLILFSLAISMAMADSNEVDEWF----------GNLQHAKERTTRLHFYFHDTTSGK- 233

Query: 292 FLDNPNGQFTAVLSGEAPVTPQ-PFAFGNLHTFDNPLSKTMSLANPADRVGHVQGWYGNC 468
              NP+ +  A    +AP T + P  FG ++  D+PL++     +    VG  QG Y + 
Sbjct: 234 ---NPSARRVA----QAPSTNKSPTFFGLINMMDDPLTEGPEATSKL--VGRGQGLYASS 284

Query: 469 GQSALTLCLTQTFAYNDSVYAGT-FSLLGSGVAFDPVKYAPIVGGTGDFAFCRGV 630
           G   L+L +     +    Y G+  ++LG      P++   IVGGTG F   RGV
Sbjct: 285 GLDELSLLMAWNVIFKSGDYNGSSLTILGRNPTTHPLREMSIVGGTGVFRMARGV 339


>tr|Q53NP4|Q53NP4_ORYSJ Dirigent-like protein OS=Oryza sativa subsp.
           japonica GN=LOC_Os11g07710 PE=4 SV=1
          Length = 178

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
 Frame = +1

Query: 226 AEAKKKPKKLSFFMFIAVQNNSFLDNPNGQFTAVLSGEAPVT-PQPFAFGNLHTFDNPLS 402
           AEA  + K+    M + V  +  +  PN     V   EAP +      FG ++  D+PL+
Sbjct: 23  AEAAGQQKE----MRMRVYWHDVVTGPNSTVAKV--AEAPTSRASATVFGTVYVIDDPLT 76

Query: 403 KTMSLANPADRVGHVQGWYGNCGQSALTLCLTQTFAY-NDSVYAGTFSLLGSGVAFDPVK 579
              SL  P+  VGH QG Y + G+  ++L +  +F +  D  Y G+   +       PV 
Sbjct: 77  DGPSLTAPSRLVGHAQGMYVSAGKETMSLLMAMSFVFAADEPYNGSSVAIFGPNPARPVS 136

Query: 580 YAPIVGGTGDFAFCRG 627
             P+VGGTG F F RG
Sbjct: 137 EIPVVGGTGAFRFARG 152


>tr|A9PBN6|A9PBN6_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 194

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 2/141 (1%)
 Frame = +1

Query: 217 STIAEAKKKPKKLSFFMFIAVQNNSFLDNPNGQFTAVLSGEAPVT-PQPFAFGNLHTFDN 393
           +T+   K+K   L F+    V       NP    TAV    A +T      FG +   D+
Sbjct: 39  ATLGLKKEKLSHLHFYFHDIVSGK----NP----TAVRIARADMTNTSSTGFGMVAMIDD 90

Query: 394 PLSKTMSLANPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDSVYAG-TFSLLGSGVAFD 570
           PL+ T  L++    VG  QG+Y +  Q+ + L +T  F + +  + G T S+LG    F 
Sbjct: 91  PLTMTPELSSKL--VGRAQGFYASASQNDVGLLMTMNFVFMEGKFNGSTLSVLGRNSVFS 148

Query: 571 PVKYAPIVGGTGDFAFCRGVA 633
            V+  PIVGG+G F F RG A
Sbjct: 149 TVREMPIVGGSGLFRFARGYA 169


>tr|A7P030|A7P030_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024746001
           PE=4 SV=1
          Length = 205

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
 Frame = +1

Query: 343 PVTPQPFAFGNLHTFDNPLSKTMSLANPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDS 522
           PV      FG+++  DNPL+    L +    VG  QG+Y + GQ    L +   FA+ND 
Sbjct: 86  PVNNSSTFFGSINMIDNPLTIEPKLNSKM--VGKAQGFYASAGQENFGLLMVMNFAFNDD 143

Query: 523 VYAG-TFSLLGSGVAFDPVKYAPIVGGTGDFAFCRG 627
            Y G TF+++G    F  V+   IVGG+G F F  G
Sbjct: 144 KYNGSTFTVIGRNDVFSKVREMEIVGGSGLFRFATG 179


>tr|A5B702|A5B702_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_029647 PE=4 SV=1
          Length = 193

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
 Frame = +1

Query: 343 PVTPQPFAFGNLHTFDNPLSKTMSLANPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDS 522
           PV      FG+++  DNPL+    L +    VG  QG+Y + GQ    L +   FA+ND 
Sbjct: 74  PVNNSSTFFGSINMIDNPLTIEPKLNSKM--VGKAQGFYASAGQENFGLLMVMNFAFNDD 131

Query: 523 VYAG-TFSLLGSGVAFDPVKYAPIVGGTGDFAFCRG 627
            Y G TF+++G    F  V+   IVGG+G F F  G
Sbjct: 132 KYNGSTFTVIGRNDVFSKVREMEIVGGSGLFRFATG 167


>tr|A9PCN5|A9PCN5_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 157

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 44/130 (33%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
 Frame = +1

Query: 241 KPKKLSFFMFIAVQNNSFLDNPNGQFTAVLSGEAPVTPQPFAFGNLHTFDNPLSKTMSLA 420
           K +KLS F    V  +  L  PN     V+    P+     AFG +   DNPL  T+   
Sbjct: 9   KKEKLSHFK---VYWHDILTGPNPSSIQVVP---PLNTSITAFGLVRMIDNPL--TLGPE 60

Query: 421 NPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDSVYAG-TFSLLGSGVAFDPVKYAPIVG 597
             +  VG  QG+Y    Q  L L +   FA+ +  Y G T ++LG    F  V+  P++G
Sbjct: 61  MSSRMVGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIG 120

Query: 598 GTGDFAFCRG 627
           G+G F F RG
Sbjct: 121 GSGLFRFARG 130


>tr|A7P032|A7P032_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024748001
           PE=4 SV=1
          Length = 194

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
 Frame = +1

Query: 241 KPKKLSFFMFIAVQNNSFLDNPNGQFTAVLSGEAPVTPQPFAFGNLHTFDNPLSKTMSLA 420
           + +KLS F F     +  +  PN     V+S   P T    AFG ++  DNPL+    L+
Sbjct: 46  RKEKLSHFRFYW---HDIVSGPNPSSIQVVS---PPTNSTTAFGLINMIDNPLTVGPKLS 99

Query: 421 NPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDSVYAG-TFSLLGSGVAFDPVKYAPIVG 597
           +    VG  QG Y +  Q  + L +   FA+ D  Y G TF++LG       V+   ++G
Sbjct: 100 SKM--VGKAQGLYTSASQEEIGLLMIMNFAFIDDKYNGSTFTVLGRNTVLSKVREMSVIG 157

Query: 598 GTGDFAFCRG 627
           G+G F F +G
Sbjct: 158 GSGLFRFAKG 167


>tr|A5BN88|A5BN88_VITVI Putative uncharacterized protein (Fragment)
           OS=Vitis vinifera GN=VITISV_009709 PE=4 SV=1
          Length = 168

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
 Frame = +1

Query: 241 KPKKLSFFMFIAVQNNSFLDNPNGQFTAVLSGEAPVTPQPFAFGNLHTFDNPLSKTMSLA 420
           + +KLS F F     +  +  PN     V+S   P T    AFG ++  DNPL+    L+
Sbjct: 46  RKEKLSHFRFYW---HDIVSGPNPSSIQVVS---PPTNSTTAFGLINMIDNPLTVGPKLS 99

Query: 421 NPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDSVYAG-TFSLLGSGVAFDPVKYAPIVG 597
           +    VG  QG Y +  Q  + L +   FA+ D  Y G TF++LG       V+   ++G
Sbjct: 100 SKM--VGKAQGLYTSASQEEIGLLMIMNFAFIDXKYNGSTFTVLGRNTVLSKVREMSVIG 157

Query: 598 GTGDFAFCRG 627
           G+G F F +G
Sbjct: 158 GSGLFRFAKG 167