DK960798
Clone id TST39A01NGRL0008_G03
Library
Length 669
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_G03. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CACACCCACCCGCATACACACACAGAACAAGGGTTTCGATAGGATCTGTAACCCGCCCCA
TTCAAATTCATATCTCTGCTAATTCTGGCCTTTGCCTTTTCGGTTGTGGGAAGCCCTTGT
TACCCTCGTGTTTGGGTGAAAGTCTTGTTGTAAGCTTGCTTTCTGGCCATGCAAGCATTC
AGAGATCAATGGATTGTGATTATGATGACAAATATGTGCTAATGTACGGTGCGCTGGAGC
AGGATTTTGACGAGCTTCAAGCGGAAGCGGCAGAAGTTGCAGCTCTCTTGCAGAAGGCTA
AAGAGAACAAGCTCCGTCTACAAACTGAGATTAAGTTTTTGAAGAGAAGGGCTTCAATGT
TGAGAGCAAGTATGAGAATACCAGATCCTTATCTCACTAGGGAAGCTGTCGGAGAAGGCG
CTCAATATATTTTTGGGCCATCCAGAGCTTCTACCGGAAGATTGGTGCTTGGGGGGGATT
TTCAGTCTAAAGCTTTGAACTCGCAATCTTTAAATGTTTCAAGCAGGGTGCCCTCCAACT
TAATATCATCTTCTAAACATCAGGACGTTGTAGGCGTGCTGAAAACTTCTTCTAAGCAGG
CTTCGAATGGTGTTTTACAACCAAAGAGAGTGGGAAAGAGGAAAATTTCCTGGCAAGATG
AGTTCTCAG
■■Homology search results ■■ -
sp_hit_id Q8WXK8
Definition sp|Q8WXK8|BPAEB_HUMAN Bullous pemphigoid antigen 1, isoform 7 (Fragment) OS=Homo sapiens
Align length 89
Score (bit) 32.3
E-value 2.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960798|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_G03, 5'
(669 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8WXK8|BPAEB_HUMAN Bullous pemphigoid antigen 1, isoform 7 (F... 32 2.3
sp|O94833|BPAEA_HUMAN Bullous pemphigoid antigen 1, isoforms 6/9... 32 2.3

>sp|Q8WXK8|BPAEB_HUMAN Bullous pemphigoid antigen 1, isoform 7
(Fragment) OS=Homo sapiens GN=DST PE=1 SV=1
Length = 3060

Score = 32.3 bits (72), Expect = 2.3
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Frame = +3

Query: 3 HPPAYTHRTRVSIGSVTRPIQIHISANSGLCLFGCGKPLLPSCL--------GEXXXXXX 158
H +Y++R+ S+ S T + + +N L L CG L+ SC+ G
Sbjct: 2 HSSSYSYRSSDSVFSNTTSTRTSLDSNENLLLVHCGPTLINSCISFGSESFDGHRLEMLQ 61

Query: 159 XXGHASIQRSMDCDYDDKYVLMYGALEQD 245
+ + S+ C +DK +L AL+ D
Sbjct: 62 QIANRVQRDSVIC--EDKLILAGNALQSD 88


>sp|O94833|BPAEA_HUMAN Bullous pemphigoid antigen 1, isoforms 6/9/10
OS=Homo sapiens GN=DST PE=1 SV=3
Length = 5171

Score = 32.3 bits (72), Expect = 2.3
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Frame = +3

Query: 3 HPPAYTHRTRVSIGSVTRPIQIHISANSGLCLFGCGKPLLPSCL--------GEXXXXXX 158
H +Y++R+ S+ S T + + +N L L CG L+ SC+ G
Sbjct: 2 HSSSYSYRSSDSVFSNTTSTRTSLDSNENLLLVHCGPTLINSCISFGSESFDGHRLEMLQ 61

Query: 159 XXGHASIQRSMDCDYDDKYVLMYGALEQD 245
+ + S+ C +DK +L AL+ D
Sbjct: 62 QIANRVQRDSVIC--EDKLILAGNALQSD 88


tr_hit_id A9NR01
Definition tr|A9NR01|A9NR01_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 25
Score (bit) 36.6
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960798|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_G03, 5'
(669 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NR01|A9NR01_PICSI Putative uncharacterized protein OS=Picea... 37 1.5
tr|B7LJF8|B7LJF8_ESCFE Adhesin for cattle intestine colonization... 36 1.9
tr|Q8XD19|Q8XD19_ECO57 Putative uncharacterized protein OS=Esche... 35 5.5
tr|B5Z3Z9|B5Z3Z9_ECO5E PKD domain protein OS=Escherichia coli O1... 35 5.5
tr|Q7AGX4|Q7AGX4_ECO57 Putative uncharacterized protein ECs0541 ... 35 5.5
tr|B7N941|B7N941_ECOLX Adhesin for cattle intestine colonization... 35 5.5
tr|B6ZPK4|B6ZPK4_ECO57 PKD domain protein OS=Escherichia coli O1... 35 5.5
tr|B3BT67|B3BT67_ECO57 Large repetitive protein OS=Escherichia c... 35 5.5
tr|B3AMK9|B3AMK9_ECO57 Large repetitive protein OS=Escherichia c... 35 5.5
tr|B3A4L9|B3A4L9_ECO57 Large repetitive protein OS=Escherichia c... 35 5.5
tr|B2PFK1|B2PFK1_ECO57 Large repetitive protein OS=Escherichia c... 35 5.5
tr|B2P261|B2P261_ECO57 Large repetitive protein OS=Escherichia c... 35 5.5
tr|B2NR10|B2NR10_ECO57 Large repetitive protein OS=Escherichia c... 35 5.5

>tr|A9NR01|A9NR01_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 222

Score = 36.6 bits (83), Expect = 1.5
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3

Query: 594 KQASNGVLQPKRVGKRKISWQDEFS 668
K NG L P R GKRKISWQD+ +
Sbjct: 195 KDVPNGFLLPNRTGKRKISWQDQMA 219


>tr|B7LJF8|B7LJF8_ESCFE Adhesin for cattle intestine colonization
OS=Escherichia fergusonii GN=siiEA PE=4 SV=1
Length = 7222

Score = 36.2 bits (82), Expect = 1.9
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +3

Query: 387 PYLTREAVGEGAQYIFGPSRASTGRLVLGGDFQSKALNSQSLNVSSRVPSNLISSSKHQD 566
P +A+GEG Q + + +TG V G + +L +++ N++S+S+H
Sbjct: 334 PTADAQALGEGNQAVLVSGKDATGNTVTGAQLLTVDTQPPTLAINTIAQDNIVSASEHNA 393

Query: 567 VVGVLKTSSKQASNGV 614
+ V TS+ +A V
Sbjct: 394 SLVVSGTSNAEAGQTV 409


>tr|Q8XD19|Q8XD19_ECO57 Putative uncharacterized protein
OS=Escherichia coli O157:H7 GN=Z0609 PE=4 SV=2
Length = 1461

Score = 34.7 bits (78), Expect = 5.5
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +3

Query: 387 PYLTREAVGEGAQYIFGPSRASTGRLVLGGDFQSKALNSQSLNVSSRVPSNLISSSKHQD 566
P +A+GEG Q + + +TG V G + +L +++ N+IS+++H
Sbjct: 335 PTADAQALGEGNQAVLVSGKDATGNTVTGAQLLTVDTQPPTLAINTIAQDNIISAAEHNV 394

Query: 567 VVGVLKTSSKQASNGV 614
+ + TS+ +A V
Sbjct: 395 ALVLSGTSNAEAGQTV 410


>tr|B5Z3Z9|B5Z3Z9_ECO5E PKD domain protein OS=Escherichia coli
O157:H7 (strain EC4115 / EHEC) GN=ECH74115_0581 PE=4
SV=1
Length = 1461

Score = 34.7 bits (78), Expect = 5.5
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +3

Query: 387 PYLTREAVGEGAQYIFGPSRASTGRLVLGGDFQSKALNSQSLNVSSRVPSNLISSSKHQD 566
P +A+GEG Q + + +TG V G + +L +++ N+IS+++H
Sbjct: 335 PTADAQALGEGNQAVLVSGKDATGNTVTGAQLLTVDTQPPTLAINTIAQDNIISAAEHNV 394

Query: 567 VVGVLKTSSKQASNGV 614
+ + TS+ +A V
Sbjct: 395 ALVLSGTSNAEAGQTV 410


>tr|Q7AGX4|Q7AGX4_ECO57 Putative uncharacterized protein ECs0541
OS=Escherichia coli O157:H7 GN=ECs0541 PE=4 SV=1
Length = 1461

Score = 34.7 bits (78), Expect = 5.5
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +3

Query: 387 PYLTREAVGEGAQYIFGPSRASTGRLVLGGDFQSKALNSQSLNVSSRVPSNLISSSKHQD 566
P +A+GEG Q + + +TG V G + +L +++ N+IS+++H
Sbjct: 335 PTADAQALGEGNQAVLVSGKDATGNTVTGAQLLTVDTQPPTLAINTIAQDNIISAAEHNV 394

Query: 567 VVGVLKTSSKQASNGV 614
+ + TS+ +A V
Sbjct: 395 ALVLSGTSNAEAGQTV 410


>tr|B7N941|B7N941_ECOLX Adhesin for cattle intestine colonization
OS=Escherichia coli GN=siiEA PE=4 SV=1
Length = 6925

Score = 34.7 bits (78), Expect = 5.5
Identities = 18/76 (23%), Positives = 37/76 (48%)
Frame = +3

Query: 387 PYLTREAVGEGAQYIFGPSRASTGRLVLGGDFQSKALNSQSLNVSSRVPSNLISSSKHQD 566
P +A+GEG Q + + +TG V G + +L +++ N++S+++H
Sbjct: 335 PTADAQALGEGNQAVLVSGKDATGNTVTGAQLLTVDTQPPTLAINTIAQDNIVSAAEHNA 394

Query: 567 VVGVLKTSSKQASNGV 614
+ + TS+ +A V
Sbjct: 395 ALVLSGTSNAEAGQTV 410


>tr|B6ZPK4|B6ZPK4_ECO57 PKD domain protein OS=Escherichia coli
O157:H7 str. TW14588 GN=ESCCO14588_1933 PE=4 SV=1
Length = 1461

Score = 34.7 bits (78), Expect = 5.5
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +3

Query: 387 PYLTREAVGEGAQYIFGPSRASTGRLVLGGDFQSKALNSQSLNVSSRVPSNLISSSKHQD 566
P +A+GEG Q + + +TG V G + +L +++ N+IS+++H
Sbjct: 335 PTADAQALGEGNQAVLVSGKDATGNTVTGAQLLTVDTQPPTLAINTIAQDNIISAAEHNV 394

Query: 567 VVGVLKTSSKQASNGV 614
+ + TS+ +A V
Sbjct: 395 ALVLSGTSNAEAGQTV 410


>tr|B3BT67|B3BT67_ECO57 Large repetitive protein OS=Escherichia coli
O157:H7 str. EC508 GN=ECH7EC508_4441 PE=4 SV=1
Length = 1461

Score = 34.7 bits (78), Expect = 5.5
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +3

Query: 387 PYLTREAVGEGAQYIFGPSRASTGRLVLGGDFQSKALNSQSLNVSSRVPSNLISSSKHQD 566
P +A+GEG Q + + +TG V G + +L +++ N+IS+++H
Sbjct: 335 PTADAQALGEGNQAVLVSGKDATGNTVTGAQLLTVDTQPPTLAINTIAQDNIISAAEHNV 394

Query: 567 VVGVLKTSSKQASNGV 614
+ + TS+ +A V
Sbjct: 395 ALVLSGTSNAEAGQTV 410


>tr|B3AMK9|B3AMK9_ECO57 Large repetitive protein OS=Escherichia coli
O157:H7 str. EC4486 GN=ECH7EC4486_0512 PE=4 SV=1
Length = 1461

Score = 34.7 bits (78), Expect = 5.5
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +3

Query: 387 PYLTREAVGEGAQYIFGPSRASTGRLVLGGDFQSKALNSQSLNVSSRVPSNLISSSKHQD 566
P +A+GEG Q + + +TG V G + +L +++ N+IS+++H
Sbjct: 335 PTADAQALGEGNQAVLVSGKDATGNTVTGAQLLTVDTQPPTLAINTIAQDNIISAAEHNV 394

Query: 567 VVGVLKTSSKQASNGV 614
+ + TS+ +A V
Sbjct: 395 ALVLSGTSNAEAGQTV 410


>tr|B3A4L9|B3A4L9_ECO57 Large repetitive protein OS=Escherichia coli
O157:H7 str. EC4401 GN=ECH7EC4401_2461 PE=4 SV=1
Length = 1461

Score = 34.7 bits (78), Expect = 5.5
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +3

Query: 387 PYLTREAVGEGAQYIFGPSRASTGRLVLGGDFQSKALNSQSLNVSSRVPSNLISSSKHQD 566
P +A+GEG Q + + +TG V G + +L +++ N+IS+++H
Sbjct: 335 PTADAQALGEGNQAVLVSGKDATGNTVTGAQLLTVDTQPPTLAINTIAQDNIISAAEHNV 394

Query: 567 VVGVLKTSSKQASNGV 614
+ + TS+ +A V
Sbjct: 395 ALVLSGTSNAEAGQTV 410