DK960732 |
Clone id |
TST39A01NGRL0008_D09 |
Library |
TST39 |
Length |
303 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_D09. 5' end sequence. |
Accession |
DK960732 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GCAGAAACGACTCAAGGCTGAGCTGGAGAATGTGAGAACGAGGTCACAAAGAGAGGCGGA TAACACCTTAAAATACGCCATACAGGATTTTGCAAAAGCCTTGCTTGATATTGGTGACAC CCTTGGAAGGGCTTTGATGACTATTCCTGCTTATGTAGGAAATGAGCTTTTGACTGGCCC TTCTTATGCAGGAAAGCAGTTGAAGAGTTTGGTGGAAGGACTGATCACAACAGAGAAAGA ACTCATGATGGTTTTGAAGAAATTTGGGGTTGAGAAGTTTGAACGGGTTGGGCAGCAGTT TGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A5VNA6 |
Definition |
sp|A5VNA6|GRPE_BRUO2 Protein grpE OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) |
Align length |
98 |
Score (bit) |
73.6 |
E-value |
3.0e-13 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9SZ18 |
Definition |
tr|Q9SZ18|Q9SZ18_ARATH GrpE like protein OS=Arabidopsis thaliana |
Align length |
100 |
Score (bit) |
85.9 |
E-value |
9.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960732|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_D09, 5' (303 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9SZ18|Q9SZ18_ARATH GrpE like protein OS=Arabidopsis thaliana... 86 9e-16 tr|Q8LB47|Q8LB47_ARATH GrpE like protein OS=Arabidopsis thaliana... 86 9e-16 tr|B4FPZ7|B4FPZ7_MAIZE Putative uncharacterized protein OS=Zea m... 83 8e-15 tr|A7P0J9|A7P0J9_VITVI Chromosome chr19 scaffold_4, whole genome... 82 1e-14 tr|A5BCM7|A5BCM7_VITVI Putative uncharacterized protein OS=Vitis... 82 1e-14 tr|A9T4B5|A9T4B5_PHYPA Predicted protein OS=Physcomitrella paten... 82 1e-14 tr|A9NWL2|A9NWL2_PICSI Putative uncharacterized protein OS=Picea... 82 2e-14 tr|B4FN51|B4FN51_MAIZE Putative uncharacterized protein OS=Zea m... 81 2e-14 tr|Q9ZSP4|Q9ZSP4_TOBAC Chaperone GrpE type 1 OS=Nicotiana tabacu... 80 4e-14 tr|Q6Z0G0|Q6Z0G0_ORYSJ Os08g0338700 protein OS=Oryza sativa subs... 80 4e-14 tr|Q5DPX9|Q5DPX9_9POAL GrpE1 OS=Saccharum hybrid cultivar PE=2 SV=1 80 4e-14 tr|B8B9V2|B8B9V2_ORYSI Putative uncharacterized protein OS=Oryza... 80 4e-14 tr|A3BS37|A3BS37_ORYSJ Putative uncharacterized protein OS=Oryza... 80 4e-14 tr|Q9ZSP3|Q9ZSP3_TOBAC Chaperone GrpE type 2 OS=Nicotiana tabacu... 80 7e-14 tr|Q5DPX8|Q5DPX8_9POAL GrpE2 OS=Saccharum hybrid cultivar PE=2 SV=1 79 9e-14 tr|Q01E91|Q01E91_OSTTA Molecular chaperone of the GrpE family (I... 79 1e-13 tr|Q6EPR4|Q6EPR4_ORYSJ Os09g0284400 protein OS=Oryza sativa subs... 77 3e-13 tr|A2YZD8|A2YZD8_ORYSI Putative uncharacterized protein OS=Oryza... 77 3e-13 tr|A4RVQ4|A4RVQ4_OSTLU Mitochondrial GrpE-like protein OS=Ostreo... 74 4e-12 tr|A9TAI5|A9TAI5_PHYPA Predicted protein OS=Physcomitrella paten... 74 5e-12 tr|A8JES1|A8JES1_CHLRE Mitochondrial grpE-type co-chaperone of t... 72 1e-11 tr|Q57FK5|Q57FK5_BRUAB GrpE, heat shock protein OS=Brucella abor... 72 2e-11 tr|Q2YP35|Q2YP35_BRUA2 GrpE protein OS=Brucella abortus (strain ... 72 2e-11 tr|B2S8G2|B2S8G2_BRUA1 GrpE protein OS=Brucella abortus (strain ... 72 2e-11 tr|B6ACF7|B6ACF7_9CRYT GrpE family protein, putative OS=Cryptosp... 71 2e-11 tr|B3Q970|B3Q970_RHOPT Ribulose-phosphate 3-epimerase OS=Rhodops... 71 3e-11 tr|B5ZMX0|B5ZMX0_RHILW Ribulose-phosphate 3-epimerase OS=Rhizobi... 70 5e-11 tr|Q21CI4|Q21CI4_RHOPB GrpE protein OS=Rhodopseudomonas palustri... 70 7e-11 tr|A5E8J1|A5E8J1_BRASB Protein grpE (HSP-70 cofactor) OS=Bradyrh... 70 7e-11 tr|Q1QRU3|Q1QRU3_NITHX GrpE protein OS=Nitrobacter hamburgensis ... 69 2e-10
>tr|Q9SZ18|Q9SZ18_ARATH GrpE like protein OS=Arabidopsis thaliana GN=F10M23.120 PE=4 SV=1 Length = 311
Score = 85.9 bits (211), Expect = 9e-16 Identities = 47/100 (47%), Positives = 68/100 (68%), Gaps = 2/100 (2%) Frame = +2
Query: 8 RLKAELENVRTRSQREADNTLKYAIQDFAKALLDIGDTLGRALMTIPAYVGNELLTGPSY 187 R AE+ENV R++R+A+NT KYA+Q+FAK+LLD+ D LGRA + ++L T Sbjct: 155 RTYAEMENVMDRTRRDAENTKKYAVQNFAKSLLDVADNLGRASSVVKESF-SKLDTSEDS 213
Query: 188 AGKQ--LKSLVEGLITTEKELMMVLKKFGVEKFERVGQQF 301 AG LK+L+EG+ TEK+L V KKFG+EK++ + + F Sbjct: 214 AGAAPLLKTLLEGVEMTEKQLAEVFKKFGMEKYDPINEPF 253
>tr|Q8LB47|Q8LB47_ARATH GrpE like protein OS=Arabidopsis thaliana GN=At4g26780/F10M23_120 PE=2 SV=1 Length = 327
Score = 85.9 bits (211), Expect = 9e-16 Identities = 47/100 (47%), Positives = 68/100 (68%), Gaps = 2/100 (2%) Frame = +2
Query: 8 RLKAELENVRTRSQREADNTLKYAIQDFAKALLDIGDTLGRALMTIPAYVGNELLTGPSY 187 R AE+ENV R++R+A+NT KYA+Q+FAK+LLD+ D LGRA + ++L T Sbjct: 171 RTYAEMENVMDRTRRDAENTKKYAVQNFAKSLLDVADNLGRASSVVKESF-SKLDTSEDS 229
Query: 188 AGKQ--LKSLVEGLITTEKELMMVLKKFGVEKFERVGQQF 301 AG LK+L+EG+ TEK+L V KKFG+EK++ + + F Sbjct: 230 AGAAPLLKTLLEGVEMTEKQLAEVFKKFGMEKYDPINEPF 269
>tr|B4FPZ7|B4FPZ7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 309
Score = 82.8 bits (203), Expect = 8e-15 Identities = 46/99 (46%), Positives = 64/99 (64%), Gaps = 1/99 (1%) Frame = +2
Query: 8 RLKAELENVRTRSQREADNTLKYAIQDFAKALLDIGDTLGRALMTIPAYVGN-ELLTGPS 184 R AE+ENV R++RE++NT KYAIQ F+K+LLD+ D L RA + A + Sbjct: 156 RSYAEMENVLARTKRESENTKKYAIQSFSKSLLDVADNLSRASSVVKASFSKIDSSNDSD 215
Query: 185 YAGKQLKSLVEGLITTEKELMMVLKKFGVEKFERVGQQF 301 A LK+L+EG+ TEK+L V KKFGVEKF+ + ++F Sbjct: 216 EAVTLLKTLLEGVEMTEKQLGEVFKKFGVEKFDPLNEKF 254
>tr|A7P0J9|A7P0J9_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027261001 PE=4 SV=1 Length = 298
Score = 82.4 bits (202), Expect = 1e-14 Identities = 45/99 (45%), Positives = 68/99 (68%), Gaps = 1/99 (1%) Frame = +2
Query: 8 RLKAELENVRTRSQREADNTLKYAIQDFAKALLDIGDTLGRALMTI-PAYVGNELLTGPS 184 R AE+ENV R++REA+N+ K+AIQ+FAK+LLD+ D LGRA + + ++ + + Sbjct: 146 RSYAEMENVMERARREAENSKKFAIQNFAKSLLDVADNLGRASLVVKESFSKIDESKDTA 205
Query: 185 YAGKQLKSLVEGLITTEKELMMVLKKFGVEKFERVGQQF 301 A LK+L+EG+ TEK+L V +KFG+EKF+ +QF Sbjct: 206 GAVPLLKTLLEGVEMTEKQLGEVFRKFGMEKFDPTNEQF 244
>tr|A5BCM7|A5BCM7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018795 PE=4 SV=1 Length = 413
Score = 82.4 bits (202), Expect = 1e-14 Identities = 45/99 (45%), Positives = 68/99 (68%), Gaps = 1/99 (1%) Frame = +2
Query: 8 RLKAELENVRTRSQREADNTLKYAIQDFAKALLDIGDTLGRALMTI-PAYVGNELLTGPS 184 R AE+ENV R++REA+N+ K+AIQ+FAK+LLD+ D LGRA + + ++ + + Sbjct: 261 RSYAEMENVMERARREAENSKKFAIQNFAKSLLDVADNLGRASLVVKESFSKIDESKDTA 320
Query: 185 YAGKQLKSLVEGLITTEKELMMVLKKFGVEKFERVGQQF 301 A LK+L+EG+ TEK+L V +KFG+EKF+ +QF Sbjct: 321 GAVPLLKTLLEGVEMTEKQLGEVFRKFGMEKFDPTNEQF 359
>tr|A9T4B5|A9T4B5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_110204 PE=4 SV=1 Length = 302
Score = 82.0 bits (201), Expect = 1e-14 Identities = 44/97 (45%), Positives = 65/97 (67%), Gaps = 2/97 (2%) Frame = +2
Query: 17 AELENVRTRSQREADNTLKYAIQDFAKALLDIGDTLGRALMTIPAYVG--NELLTGPSYA 190 AE+ENV R++REA++T K+A+Q FAK LLD+ D LGRA +P + + L S A Sbjct: 158 AEVENVMARARREAESTRKFALQGFAKGLLDVADNLGRATGAVPENLRKLDSTLEDSSGA 217
Query: 191 GKQLKSLVEGLITTEKELMMVLKKFGVEKFERVGQQF 301 K L +L++G+ TEK+L V ++ G+EKFE G++F Sbjct: 218 AKVLITLLQGVEMTEKQLQQVFRQNGLEKFESEGKEF 254
>tr|A9NWL2|A9NWL2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 322
Score = 81.6 bits (200), Expect = 2e-14 Identities = 46/99 (46%), Positives = 66/99 (66%), Gaps = 1/99 (1%) Frame = +2
Query: 8 RLKAELENVRTRSQREADNTLKYAIQDFAKALLDIGDTLGRALMTI-PAYVGNELLTGPS 184 R AE+ENV R++REA++T K+AIQ FAK+LLD+ D L RA + ++ + S Sbjct: 165 RSYAEVENVMDRARREAESTKKFAIQSFAKSLLDVADNLSRASSVVKESFSKIDPSKDSS 224
Query: 185 YAGKQLKSLVEGLITTEKELMMVLKKFGVEKFERVGQQF 301 A LK+L+EG+ TEK+L VLKK GVE+F+ + +QF Sbjct: 225 GAAPLLKTLLEGVAMTEKQLSDVLKKHGVERFDPLNEQF 263
>tr|B4FN51|B4FN51_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 303
Score = 81.3 bits (199), Expect = 2e-14 Identities = 44/100 (44%), Positives = 68/100 (68%), Gaps = 2/100 (2%) Frame = +2
Query: 8 RLKAELENVRTRSQREADNTLKYAIQDFAKALLDIGDTLGRALMTIPAYVGNELLTGPSY 187 R AE+EN+ R++RE++N+ KYA+Q+F+K+LLD+ D L RA + +++ T Sbjct: 139 RSYAEMENIIARTKRESENSKKYAVQNFSKSLLDVADNLARASSVVKESF-SKIDTSKDS 197
Query: 188 AG--KQLKSLVEGLITTEKELMMVLKKFGVEKFERVGQQF 301 AG LK+L+EG+ TEK+L V KKFGVEKF+ + ++F Sbjct: 198 AGAVPLLKTLLEGVDMTEKQLAEVFKKFGVEKFDPLNEEF 237
>tr|Q9ZSP4|Q9ZSP4_TOBAC Chaperone GrpE type 1 OS=Nicotiana tabacum GN=GrpE1 PE=2 SV=1 Length = 299
Score = 80.5 bits (197), Expect = 4e-14 Identities = 45/99 (45%), Positives = 65/99 (65%), Gaps = 1/99 (1%) Frame = +2
Query: 8 RLKAELENVRTRSQREADNTLKYAIQDFAKALLDIGDTLGRALMTI-PAYVGNELLTGPS 184 R AE+ENV R++REA+N+ K+AIQ+F KALLD+ D LGRA + ++ + Sbjct: 144 RSYAEMENVMERTKREAENSKKFAIQNFVKALLDVPDNLGRASSVVKESFSKIDASKDTV 203
Query: 185 YAGKQLKSLVEGLITTEKELMMVLKKFGVEKFERVGQQF 301 A LK+L+EG+ T+K+L V KKFGVEK++ +QF Sbjct: 204 GAMPLLKTLLEGVEMTDKQLAEVFKKFGVEKYDPTNEQF 242
>tr|Q6Z0G0|Q6Z0G0_ORYSJ Os08g0338700 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0062G05.3 PE=2 SV=1 Length = 311
Score = 80.5 bits (197), Expect = 4e-14 Identities = 44/99 (44%), Positives = 65/99 (65%), Gaps = 1/99 (1%) Frame = +2
Query: 8 RLKAELENVRTRSQREADNTLKYAIQDFAKALLDIGDTLGRALMTI-PAYVGNELLTGPS 184 R AE+ENV R++RE+DN KYA+Q F+K+LLD+ D L RA + ++ + + Sbjct: 152 RSYAEMENVIARTKRESDNAKKYAVQGFSKSLLDVADNLSRASSVVKESFSKIDTSNESA 211
Query: 185 YAGKQLKSLVEGLITTEKELMMVLKKFGVEKFERVGQQF 301 A K L +L+EG+ TEK+L V KKFGVEKF+ + ++F Sbjct: 212 EAVKLLNTLLEGVEMTEKQLGEVFKKFGVEKFDPLNEKF 250
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