DK960600 |
Clone id |
TST39A01NGRL0007_N19 |
Library |
TST39 |
Length |
414 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_N19. 5' end sequence. |
Accession |
DK960600 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GCCGATGCAGGGACCGCCTTAGACAGTCGAGTGCCTGAGGTCCTGTACCCTTTCTTGTCT ATCTCTCTTCTCACTGTCAGCCTTATGGTTGCAGCTTACTTTTTTATATATTAAGTGACA ACTTCAAAGTTTACTATGAGCCTTGTGCACGAGCTTTAGACTGCCCCTGTTTATACCATC TAGATGGGATTTGGGTCCTTATTCCTCCTCTTATGGACCGGGGTGTATGTTTGATAAAAG GGAGGCAATGTAGATGGTTTAGAAAATTTTGAGTATCAGTCAGAAAGGGTGCATGCACCA AAGAAGCCTTGCTAATTTACCTTTTCAAGACCTTCAGATCCTGTTGTTTTAAAGTCTGCC GACGGCTGTTTTCTTGTAAAAAAAAGAAAAAAAAAGAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q76LT9 |
Definition |
sp|Q76LT9|NEF1_CHICK Protein NEF1 OS=Gallus gallus |
Align length |
76 |
Score (bit) |
64.7 |
E-value |
1.0e-10 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A8QE38 |
Definition |
tr|A8QE38|A8QE38_BRUMA UPF0197 protein C11orf10 homolog, putative OS=Brugia malayi |
Align length |
63 |
Score (bit) |
70.1 |
E-value |
5.0e-11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960600|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_N19, 5' (377 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A8QE38|A8QE38_BRUMA UPF0197 protein C11orf10 homolog, putativ... 70 5e-11 tr|B8LMF5|B8LMF5_PICSI Putative uncharacterized protein OS=Picea... 69 1e-10 tr|A9NLJ4|A9NLJ4_PICSI Putative uncharacterized protein OS=Picea... 69 2e-10 tr|A9PDY7|A9PDY7_POPTR Putative uncharacterized protein OS=Popul... 67 6e-10 tr|A9PDT7|A9PDT7_POPTR Putative uncharacterized protein OS=Popul... 67 6e-10 tr|Q8LCF2|Q8LCF2_ARATH Putative uncharacterized protein (Putativ... 66 1e-09 tr|B6T0N4|B6T0N4_MAIZE Putative uncharacterized protein OS=Zea m... 66 1e-09 tr|Q5Z647|Q5Z647_ORYSJ Os06g0567000 protein OS=Oryza sativa subs... 65 1e-09 tr|B6T184|B6T184_MAIZE Putative uncharacterized protein OS=Zea m... 65 1e-09 tr|A2YE66|A2YE66_ORYSI Putative uncharacterized protein OS=Oryza... 65 1e-09 tr|B6PKG6|B6PKG6_BRAFL Putative uncharacterized protein OS=Branc... 65 1e-09 tr|B6T1X0|B6T1X0_MAIZE Putative uncharacterized protein OS=Zea m... 65 2e-09 tr|B6SQC4|B6SQC4_MAIZE Putative uncharacterized protein OS=Zea m... 65 2e-09 tr|Q4PM45|Q4PM45_IXOSC Protein NEF1, putative OS=Ixodes scapular... 65 2e-09 tr|B5G3F8|B5G3F8_TAEGU Putative nef1 variant 1 OS=Taeniopygia gu... 65 2e-09 tr|Q60FD1|Q60FD1_MOUSE Putative uncharacterized protein OS=Mus m... 65 2e-09 tr|A8K6L8|A8K6L8_HUMAN cDNA FLJ76563 OS=Homo sapiens GN=C11orf10... 65 2e-09 tr|Q5K4I0|Q5K4I0_GOSHI Putative uncharacterized protein xl2 OS=G... 62 1e-08 tr|A6N0T8|A6N0T8_ORYSI Putative uncharacterized protein (Fragmen... 62 1e-08 tr|B6TSS6|B6TSS6_MAIZE Putative uncharacterized protein OS=Zea m... 61 3e-08 tr|A6N1M8|A6N1M8_ORYSI Putative uncharacterized protein (Fragmen... 60 7e-08 tr|A7SW81|A7SW81_NEMVE Predicted protein OS=Nematostella vectens... 59 9e-08 tr|A8I4G8|A8I4G8_CHLRE Predicted protein OS=Chlamydomonas reinha... 58 3e-07 tr|A9QQ57|A9QQ57_LYCSI Putative uncharacterized protein (Fragmen... 58 3e-07 tr|B3SBZ2|B3SBZ2_TRIAD Putative uncharacterized protein (Fragmen... 56 1e-06 tr|A7PE76|A7PE76_VITVI Chromosome chr11 scaffold_13, whole genom... 54 3e-06 tr|B5G3G1|B5G3G1_TAEGU Putative nef1 variant 1 OS=Taeniopygia gu... 53 9e-06 tr|Q5BS67|Q5BS67_SCHJA SJCHGC05844 protein OS=Schistosoma japoni... 52 1e-05 tr|B6LXB4|B6LXB4_BRAFL Putative uncharacterized protein OS=Branc... 52 1e-05 tr|A9SYB2|A9SYB2_PHYPA Predicted protein OS=Physcomitrella paten... 49 1e-04
>tr|A8QE38|A8QE38_BRUMA UPF0197 protein C11orf10 homolog, putative OS=Brugia malayi GN=Bm1_50680 PE=4 SV=1 Length = 81
Score = 70.1 bits (170), Expect = 5e-11 Identities = 33/63 (52%), Positives = 46/63 (73%) Frame = +1
Query: 43 LYPFLSISLLTVSLMVAAYFFIY*VTTSKFTMSLVHEL*TAPVYTI*MGFGSLFLLLWTG 222 LYP L++ LL + L A+FF+Y VT+SKFT L+ EL + V + +GFGS+FL+LWTG Sbjct: 19 LYPQLAVLLLAIGLFFMAWFFVYEVTSSKFTRVLMKELLISSVAALFLGFGSVFLMLWTG 78
Query: 223 VYV 231 +YV Sbjct: 79 IYV 81
>tr|B8LMF5|B8LMF5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 78
Score = 68.9 bits (167), Expect = 1e-10 Identities = 39/77 (50%), Positives = 50/77 (64%) Frame = +1
Query: 1 ADAGTALDSRVPEVLYPFLSISLLTVSLMVAAYFFIY*VTTSKFTMSLVHEL*TAPVYTI 180 A A A+ S V E YP L++ LL V L++ A FFIY T SKF+ SL E+ T+ ++ Sbjct: 2 AQAVNAIYSPVSEAWYPTLAMLLLIVGLVITANFFIYEATVSKFSRSLTREVVTSGFASV 61
Query: 181 *MGFGSLFLLLWTGVYV 231 +GFGSLFLLL GVYV Sbjct: 62 FLGFGSLFLLLAVGVYV 78
>tr|A9NLJ4|A9NLJ4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 78
Score = 68.6 bits (166), Expect = 2e-10 Identities = 39/77 (50%), Positives = 49/77 (63%) Frame = +1
Query: 1 ADAGTALDSRVPEVLYPFLSISLLTVSLMVAAYFFIY*VTTSKFTMSLVHEL*TAPVYTI 180 A A A+ S V E YP L++ LL V L++ A FFIY T SKF+ SL E+ T ++ Sbjct: 2 AQAVNAIYSPVSEAWYPTLAMLLLIVGLVITANFFIYEATVSKFSRSLTREVVTGGFASV 61
Query: 181 *MGFGSLFLLLWTGVYV 231 +GFGSLFLLL GVYV Sbjct: 62 FLGFGSLFLLLAVGVYV 78
>tr|A9PDY7|A9PDY7_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 78
Score = 66.6 bits (161), Expect = 6e-10 Identities = 35/72 (48%), Positives = 48/72 (66%) Frame = +1
Query: 16 ALDSRVPEVLYPFLSISLLTVSLMVAAYFFIY*VTTSKFTMSLVHEL*TAPVYTI*MGFG 195 A+ S VP YP L++ +L + L+V A FFIY T+S+ SL EL T + ++ +GFG Sbjct: 7 AISSPVPVAWYPTLAVFMLAIGLIVTASFFIYEATSSRRNRSLAKELTTGAIASLFLGFG 66
Query: 196 SLFLLLWTGVYV 231 SLFLLL +GVYV Sbjct: 67 SLFLLLASGVYV 78
>tr|A9PDT7|A9PDT7_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 78
Score = 66.6 bits (161), Expect = 6e-10 Identities = 36/72 (50%), Positives = 49/72 (68%) Frame = +1
Query: 16 ALDSRVPEVLYPFLSISLLTVSLMVAAYFFIY*VTTSKFTMSLVHEL*TAPVYTI*MGFG 195 A+ S VP YP L+I +L + LMV+A FFIY T+S+ + SL EL T + + +GFG Sbjct: 7 AITSPVPVTWYPTLAIFMLAIGLMVSASFFIYEATSSRRSRSLAKELTTGALASFFLGFG 66
Query: 196 SLFLLLWTGVYV 231 SLF+LL +GVYV Sbjct: 67 SLFMLLASGVYV 78
>tr|Q8LCF2|Q8LCF2_ARATH Putative uncharacterized protein (Putative uncharacterized protein At4g29735) (At4g29735) (Putative uncharacterized protein At4g29735/T16L4.1) OS=Arabidopsis thaliana GN=At4g29735/T16L4.1 PE=4 SV=1 Length = 76
Score = 65.9 bits (159), Expect = 1e-09 Identities = 35/75 (46%), Positives = 49/75 (65%) Frame = +1
Query: 7 AGTALDSRVPEVLYPFLSISLLTVSLMVAAYFFIY*VTTSKFTMSLVHEL*TAPVYTI*M 186 A + S +P LYP LS+ L + L++ A FFIY T+S+ S+ EL T+ V ++ + Sbjct: 2 AAKPIASPIPVALYPTLSVFTLAIGLVITAIFFIYEATSSRKNRSVGKELATSAVASVFL 61
Query: 187 GFGSLFLLLWTGVYV 231 GFGSLFLLL +GVYV Sbjct: 62 GFGSLFLLLASGVYV 76
>tr|B6T0N4|B6T0N4_MAIZE Putative uncharacterized protein OS=Zea mays PE=4 SV=1 Length = 76
Score = 65.9 bits (159), Expect = 1e-09 Identities = 36/75 (48%), Positives = 51/75 (68%) Frame = +1
Query: 7 AGTALDSRVPEVLYPFLSISLLTVSLMVAAYFFIY*VTTSKFTMSLVHEL*TAPVYTI*M 186 A A+ S VP YP L++ +++V LM A FFIY T+S+ + SL E+ TA V ++ + Sbjct: 2 AAKAISSPVPVEWYPTLAVVMVSVGLMFTASFFIYEATSSRRSRSLSKEIATAVVASVFL 61
Query: 187 GFGSLFLLLWTGVYV 231 GFGSLF+LL +GVYV Sbjct: 62 GFGSLFVLLASGVYV 76
>tr|Q5Z647|Q5Z647_ORYSJ Os06g0567000 protein OS=Oryza sativa subsp. japonica GN=P0567G03.21 PE=4 SV=1 Length = 76
Score = 65.5 bits (158), Expect = 1e-09 Identities = 35/75 (46%), Positives = 49/75 (65%) Frame = +1
Query: 7 AGTALDSRVPEVLYPFLSISLLTVSLMVAAYFFIY*VTTSKFTMSLVHEL*TAPVYTI*M 186 A A+ S VP YP L++ ++ V LM A FFIY T+S+ SL E+ TA + ++ + Sbjct: 2 AAKAISSPVPVDWYPTLAVVMVAVGLMFTASFFIYEATSSRRNRSLAKEIATATIASVFL 61
Query: 187 GFGSLFLLLWTGVYV 231 GFGSLF+LL +GVYV Sbjct: 62 GFGSLFVLLASGVYV 76
>tr|B6T184|B6T184_MAIZE Putative uncharacterized protein OS=Zea mays PE=4 SV=1 Length = 76
Score = 65.5 bits (158), Expect = 1e-09 Identities = 36/75 (48%), Positives = 51/75 (68%) Frame = +1
Query: 7 AGTALDSRVPEVLYPFLSISLLTVSLMVAAYFFIY*VTTSKFTMSLVHEL*TAPVYTI*M 186 A A+ S VP YP L++ +++V LM A FFIY T+S+ + SL E+ TA V ++ + Sbjct: 2 AAKAISSPVPVEWYPTLAVVMVSVXLMFTASFFIYEATSSRRSRSLSKEIATAVVASVFL 61
Query: 187 GFGSLFLLLWTGVYV 231 GFGSLF+LL +GVYV Sbjct: 62 GFGSLFVLLASGVYV 76
>tr|A2YE66|A2YE66_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_23410 PE=4 SV=1 Length = 76
Score = 65.5 bits (158), Expect = 1e-09 Identities = 35/75 (46%), Positives = 49/75 (65%) Frame = +1
Query: 7 AGTALDSRVPEVLYPFLSISLLTVSLMVAAYFFIY*VTTSKFTMSLVHEL*TAPVYTI*M 186 A A+ S VP YP L++ ++ V LM A FFIY T+S+ SL E+ TA + ++ + Sbjct: 2 AAKAISSPVPVDWYPTLAVVMVAVGLMFTASFFIYEATSSRRNRSLAKEIATATIASVFL 61
Query: 187 GFGSLFLLLWTGVYV 231 GFGSLF+LL +GVYV Sbjct: 62 GFGSLFVLLASGVYV 76
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