DK960456
Clone id TST39A01NGRL0007_H14
Library
Length 503
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_H14. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
CTGTAAGCAGGAATAACACAATATTGTAAAGATACAGCAAGTCCCAAGACCCAAATAAAC
AATGTATGGAAGTGCTAGAGCAGACATGCCAACAGACCTTCCTATATGGTGGTGCAAGCA
GCTGTCTGTATGAGGTGCAAAGTCAACTTCAAAGGACTAGAACGGTGGATAAGAAGTAGC
CAGAGCCCTGAGGAATGGAGGGTAGGAAAGCCTATACGAGGAATAAGAAACATGTCAGAA
CGATGGCCCTTGAAGCATATTGAATTGCACAAATTTCACACACTTTGACAAGGCTCGATG
CTCAGCCTGCATTGAAGAGAAATCAAAGCCAGCCACTGAAAGAGAGTTAAATCTACCAAC
TGCTGCAATGCACCAAAAGCATAAAATGCATGCCTTGATCGAGGATGAAAACATGATGGC
AAAAATTCCAACCTTGCACAGAAAGCTCCACATGTAAAGAAGAGGGAAATCTCTCCGTTC
TGAATGTCTGACGGTTGCTTGCC
■■Homology search results ■■ -
sp_hit_id Q7TPK1
Definition sp|Q7TPK1|UHRF1_RAT E3 ubiquitin-protein ligase UHRF1 OS=Rattus norvegicus
Align length 40
Score (bit) 30.0
E-value 6.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960456|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_H14, 5'
(503 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7TPK1|UHRF1_RAT E3 ubiquitin-protein ligase UHRF1 OS=Rattus ... 30 6.4
sp|Q8VDF2|UHRF1_MOUSE E3 ubiquitin-protein ligase UHRF1 OS=Mus m... 30 6.4
sp|P20263|PO5F1_MOUSE POU domain, class 5, transcription factor ... 30 8.3

>sp|Q7TPK1|UHRF1_RAT E3 ubiquitin-protein ligase UHRF1 OS=Rattus
norvegicus GN=Uhrf1 PE=2 SV=2
Length = 774

Score = 30.0 bits (66), Expect = 6.4
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1

Query: 121 AVCMRCK--VNFKGLERWIRSSQSPEEWRVGKPIRGIRNM 234
A+ + C +N KG E E+WR GKP+R +RNM
Sbjct: 504 ALALNCHSPINEKGAEA--------EDWRQGKPVRVVRNM 535


>sp|Q8VDF2|UHRF1_MOUSE E3 ubiquitin-protein ligase UHRF1 OS=Mus
musculus GN=Uhrf1 PE=1 SV=2
Length = 782

Score = 30.0 bits (66), Expect = 6.4
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1

Query: 121 AVCMRCK--VNFKGLERWIRSSQSPEEWRVGKPIRGIRNM 234
A+ + C +N KG E E+WR GKP+R +RNM
Sbjct: 512 ALALNCHSPINEKGAEA--------EDWRQGKPVRVVRNM 543


>sp|P20263|PO5F1_MOUSE POU domain, class 5, transcription factor 1
OS=Mus musculus GN=Pou5f1 PE=1 SV=1
Length = 352

Score = 29.6 bits (65), Expect = 8.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -1

Query: 305 LSIEPCQSV*NLCNSICFKGHRSDMFLIPRIGFPTLHSSG 186
L I PC C + + G + + L+P++G TL G
Sbjct: 53 LGISPCPPAYEFCGGMAYCGPQVGLGLVPQVGVETLQPEG 92


tr_hit_id A8NTL2
Definition tr|A8NTL2|A8NTL2_COPC7 Predicted protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003)
Align length 65
Score (bit) 37.4
E-value 0.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960456|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_H14, 5'
(503 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8NTL2|A8NTL2_COPC7 Predicted protein OS=Coprinopsis cinerea ... 37 0.40
tr|Q83HR3|Q83HR3_TROW8 Alcohol dehydrogenase OS=Tropheryma whipp... 33 5.8
tr|Q83GG5|Q83GG5_TROWT Zinc-type alcohol dehydrogenase OS=Trophe... 33 5.8
tr|B0WL46|B0WL46_CULQU Sideroflexin 1,2,3 OS=Culex quinquefascia... 33 7.6
tr|A6RW65|A6RW65_BOTFB Putative uncharacterized protein OS=Botry... 33 9.9

>tr|A8NTL2|A8NTL2_COPC7 Predicted protein OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_06343 PE=4
SV=1
Length = 449

Score = 37.4 bits (85), Expect = 0.40
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -3

Query: 378 FWCIAAVGRFNSLSVAGFDFSSMQ------AEHRALSKCVKFVQFNMLQGPSF*HVSYSS 217
FW + A ++ S ++ GFD + +Q +R LS+ VK+V N+L G F +
Sbjct: 78 FWTLEAAKQWKSSTIIGFDITDVQPNLHGLEHYRHLSRRVKWVHGNLLDGLPFPESQFDF 137

Query: 216 YRLSY 202
R++Y
Sbjct: 138 VRIAY 142


>tr|Q83HR3|Q83HR3_TROW8 Alcohol dehydrogenase OS=Tropheryma whipplei
(strain TW08/27) GN=adh PE=3 SV=1
Length = 356

Score = 33.5 bits (75), Expect = 5.8
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +1

Query: 124 VCMRCKVNFKGLERWIRSSQSPEEWRVGKPIRGIRNMSERWPLKHIELHK 273
VC C+ N G + S+ P WR+G I G++ R PL LHK
Sbjct: 94 VCRFCRANNNG--HCLGDSEGPGGWRLGGLINGVQAQFARIPLADNSLHK 141


>tr|Q83GG5|Q83GG5_TROWT Zinc-type alcohol dehydrogenase
OS=Tropheryma whipplei (strain Twist) GN=adh PE=3 SV=1
Length = 357

Score = 33.5 bits (75), Expect = 5.8
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +1

Query: 124 VCMRCKVNFKGLERWIRSSQSPEEWRVGKPIRGIRNMSERWPLKHIELHK 273
VC C+ N G + S+ P WR+G I G++ R PL LHK
Sbjct: 95 VCRFCRANNNG--HCLGDSEGPGGWRLGGLINGVQAQFARIPLADNSLHK 142


>tr|B0WL46|B0WL46_CULQU Sideroflexin 1,2,3 OS=Culex quinquefasciatus
GN=CpipJ_CPIJ008314 PE=4 SV=1
Length = 321

Score = 33.1 bits (74), Expect = 7.6
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +1

Query: 160 ERWIRSSQSPEEWRVGKPIRGIRNMSERWPLKHIELHKFH 279
E+ R+++ +++R GKP+ GI ++ E W K++ FH
Sbjct: 40 EQLDRAARIVKDYRAGKPVEGISSVDELWAAKYLYDSAFH 79


>tr|A6RW65|A6RW65_BOTFB Putative uncharacterized protein
OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_04852
PE=4 SV=1
Length = 145

Score = 32.7 bits (73), Expect = 9.9
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = -3

Query: 429 GIFAIMFSSSIKACILCFWCIAAVGRFNSLSVAGFDFSSMQAEHRALSKCVKF 271
G+ + + SSI + WC+A V S S G+ SS++ + + LSKCV +
Sbjct: 47 GLLTVPYPSSIADALPGDWCLAQV--LLSSSYIGWGVSSLKKDAQELSKCVAY 97