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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960119
Clone id TST39A01NGRL0006_I20
Library
Length 630
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_I20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
TCATCTGATAACATCATCAGCATATCAGGGGTGGTTTCAGATAATGTCGTTCACTCTTTC
CTTCAAGCATGCAGAACAGGACTGTTTGATCAGGCTCAGAAAGCCGTAGCTGACTGCACA
TCTTATTGCTACCTCGATTCACAAATACTCTCACAGCTCTATGATGTGGTTGTACCTGAT
GAGGAACTTTCAGATACCCAAAAGGCTCAGATTTGTGAAAGAATTGCACAAGCTGACAAA
TGCCTAATTGATGGTGCAGACGAGTACTTGCAAATGCTTGATGTGGCTAGTGGTACCATG
CGGTCTTTCTGTAATATGCCACAAGACTCTACTTTCGTATGACTACCTGGTATAAATGTG
TGCAGCAGGATGGTCTACTTGTTTCCCCTGAATCAAGGGTGGTAAGATAATCAGTGTTTA
ATGCTTGTGCAGAAGCTTGAGGTTTTCTAGTTCTTATGATTTTGAAATTAGGGCCCAGGT
AGAACAGCTAAACTCATGCCCAAGGTTGGGTCTACTGTTGACGAGACAGTTCATGTTACC
GTGATCCTAAAAGTTCATATGCTCCCAGATGTTGAAAATTTTCAGGTGCAGCGGGTAATT
ATGTTACTTATTTTTTAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q99J62
Definition sp|Q99J62|RFC4_MOUSE Replication factor C subunit 4 OS=Mus musculus
Align length 101
Score (bit) 79.3
E-value 1.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960119|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_I20, 5'
         (616 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q99J62|RFC4_MOUSE Replication factor C subunit 4 OS=Mus muscu...    79   1e-14
sp|P35249|RFC4_HUMAN Replication factor C subunit 4 OS=Homo sapi...    77   7e-14
sp|Q54MD4|RFC4_DICDI Probable replication factor C subunit 4 OS=...    72   2e-12
sp|Q09843|RFC2_SCHPO Replication factor C subunit 2 OS=Schizosac...    59   3e-08
sp|P0C7N7|RFC2_PHANO Replication factor C subunit 2 OS=Phaeospha...    53   1e-06
sp|P40348|RFC2_YEAST Replication factor C subunit 2 OS=Saccharom...    40   0.010
sp|A2SQT3|RFCS_METLZ Replication factor C small subunit OS=Metha...    38   0.048
sp|O94449|RFC4_SCHPO Replication factor C subunit 4 OS=Schizosac...    37   0.11 
sp|Q9HI47|RFCS_THEAC Replication factor C small subunit OS=Therm...    36   0.18 
sp|Q977Z9|RFCS_THEVO Replication factor C small subunit OS=Therm...    32   3.4  
sp|Q977X6|DHYS_METTE Probable deoxyhypusine synthase OS=Methanos...    32   3.4  
sp|A6US36|RFCS_METVS Replication factor C small subunit OS=Metha...    31   4.5  
sp|A1K5I2|LPXK_AZOSB Tetraacyldisaccharide 4'-kinase OS=Azoarcus...    30   9.9  

>sp|Q99J62|RFC4_MOUSE Replication factor C subunit 4 OS=Mus musculus
           GN=Rfc4 PE=2 SV=1
          Length = 364

 Score = 79.3 bits (194), Expect = 1e-14
 Identities = 36/101 (35%), Positives = 62/101 (61%)
 Frame = +1

Query: 1   SSDNIISISGVVSDNVVHSFLQACRTGLFDQAQKAVADCTSYCYLDSQILSQLYDVVVPD 180
           S D I  I+GV+    +     AC +G FD+ +  V +     +  +Q+++QL+D ++ +
Sbjct: 258 SEDVITDIAGVIPAATIDGIFTACHSGSFDKLEAVVKNLIDEGHAATQLVNQLHDAIIEN 317

Query: 181 EELSDTQKAQICERIAQADKCLIDGADEYLQMLDVASGTMR 303
           E LSD  K+ I E++A+ DKCL DGADE+LQ++ + +  M+
Sbjct: 318 ENLSDKHKSIITEKLAEVDKCLADGADEHLQLMSLCATVMQ 358


>sp|P35249|RFC4_HUMAN Replication factor C subunit 4 OS=Homo sapiens
           GN=RFC4 PE=1 SV=2
          Length = 363

 Score = 77.0 bits (188), Expect = 7e-14
 Identities = 38/97 (39%), Positives = 62/97 (63%)
 Frame = +1

Query: 13  IISISGVVSDNVVHSFLQACRTGLFDQAQKAVADCTSYCYLDSQILSQLYDVVVPDEELS 192
           I  I+GV+    +     AC++G FD+ +  V D     +  +Q+++QL+DVVV +  LS
Sbjct: 262 ITDIAGVIPAEKIDGVFAACQSGSFDKLEAVVKDLIDEGHAATQLVNQLHDVVV-ENNLS 320

Query: 193 DTQKAQICERIAQADKCLIDGADEYLQMLDVASGTMR 303
           D QK+ I E++A+ DKCL DGADE+LQ++ + +  M+
Sbjct: 321 DKQKSIITEKLAEVDKCLADGADEHLQLISLCATVMQ 357


>sp|Q54MD4|RFC4_DICDI Probable replication factor C subunit 4
           OS=Dictyostelium discoideum GN=rfc4 PE=3 SV=1
          Length = 347

 Score = 72.4 bits (176), Expect = 2e-12
 Identities = 35/105 (33%), Positives = 62/105 (59%)
 Frame = +1

Query: 1   SSDNIISISGVVSDNVVHSFLQACRTGLFDQAQKAVADCTSYCYLDSQILSQLYDVVVPD 180
           S D I +I+G +   ++   +  C+   FD+ Q  V    +  Y  SQ++SQL+D V+  
Sbjct: 230 SEDVIYNIAGSLPPQLIKQLVDCCKKNSFDRLQSMVQSIIAQGYPVSQVISQLFDYVLTT 289

Query: 181 EELSDTQKAQICERIAQADKCLIDGADEYLQMLDVASGTMRSFCN 315
           ++L+ +QK+ I  +I   D+ LIDG++E+LQ+ D++S  M+   N
Sbjct: 290 KDLNQSQKSHITMKIGNVDRNLIDGSEEFLQLFDLSSYIMKQLNN 334


>sp|Q09843|RFC2_SCHPO Replication factor C subunit 2
           OS=Schizosaccharomyces pombe GN=rfc2 PE=1 SV=1
          Length = 340

 Score = 58.5 bits (140), Expect = 3e-08
 Identities = 33/94 (35%), Positives = 52/94 (55%)
 Frame = +1

Query: 10  NIISISGVVSDNVVHSFLQACRTGLFDQAQKAVADCTSYCYLDSQILSQLYDVVVPDEEL 189
           ++  ++G V  N++ S L    T      +    D  +  Y    ILSQL+DV++ +E L
Sbjct: 241 SVEELAGAVPYNIIRSLLDTAYTKNVSNIETLSRDVAAEGYSTGIILSQLHDVLLKEETL 300

Query: 190 SDTQKAQICERIAQADKCLIDGADEYLQMLDVAS 291
           S   K +I  ++++ DK L DGADE LQ+LD+ S
Sbjct: 301 SSPVKYKIFMKLSEVDKRLNDGADETLQLLDLLS 334


>sp|P0C7N7|RFC2_PHANO Replication factor C subunit 2
           OS=Phaeosphaeria nodorum GN=RFC2 PE=3 SV=1
          Length = 411

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
 Frame = +1

Query: 1   SSDNIISISGVVSDNVVHSFLQA------CRTGLFDQAQKAVADCTSYCYLDSQILSQLY 162
           S + I  I+GV+    + SF  A       ++  +++  K V +  +  +  SQ +SQLY
Sbjct: 300 SLEQIAEIAGVIPAPTLASFSDALFPKSAAKSIRYNEIAKVVENMIAEGWSASQTVSQLY 359

Query: 163 DVVVPDEELSDTQKAQICERIAQADKCLIDGADEYLQMLDV 285
           + V+ DE + D +K ++    ++ DK L+DG DE+L +LD+
Sbjct: 360 EQVMFDERVEDIKKVRLAGVFSETDKRLVDGGDEHLAVLDL 400


>sp|P40348|RFC2_YEAST Replication factor C subunit 2
           OS=Saccharomyces cerevisiae GN=RFC2 PE=1 SV=1
          Length = 353

 Score = 40.0 bits (92), Expect = 0.010
 Identities = 20/95 (21%), Positives = 51/95 (53%)
 Frame = +1

Query: 1   SSDNIISISGVVSDNVVHSFLQACRTGLFDQAQKAVADCTSYCYLDSQILSQLYDVVVPD 180
           +S  +  ++GVV  +++   ++  ++G FD+ +K V       +  + +++QL++  + +
Sbjct: 252 TSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYITN 311

Query: 181 EELSDTQKAQICERIAQADKCLIDGADEYLQMLDV 285
           +      K QI   +   D  L +G +E++Q+L++
Sbjct: 312 DNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNL 346


>sp|A2SQT3|RFCS_METLZ Replication factor C small subunit
           OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM
           4855 / Z) GN=rfcS PE=3 SV=1
          Length = 321

 Score = 37.7 bits (86), Expect = 0.048
 Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
 Frame = +1

Query: 1   SSDNIISISGVVSDNVVHSFLQACRTGLFDQAQKAV-ADCTSYCYLDSQILSQLYDVVVP 177
           +++NI +I+       +   L  C  G F+ A++ + A         +++L+QLY  +  
Sbjct: 216 TAENIYAITSNAKPQEITDLLARCLEGDFETAERMLHALMYDKGIAPNELLNQLYREISR 275

Query: 178 DEELSDTQKAQICERIAQADKCLIDGADEYLQMLDVASGTMRSFCN 315
            E L    K  + + + +AD  + +GAD  +QM  + +  +RS  N
Sbjct: 276 SETLDRRLKVDLIDHLGEADFRMSEGADADIQMDALLARIVRSGMN 321


>sp|O94449|RFC4_SCHPO Replication factor C subunit 4
           OS=Schizosaccharomyces pombe GN=rfc4 PE=1 SV=1
          Length = 342

 Score = 36.6 bits (83), Expect = 0.11
 Identities = 17/92 (18%), Positives = 44/92 (47%)
 Frame = +1

Query: 1   SSDNIISISGVVSDNVVHSFLQACRTGLFDQAQKAVADCTSYCYLDSQILSQLYDVVVPD 180
           + +N+  ++   S   +H+ L AC++G  D A + +       +    I++ ++ VV   
Sbjct: 232 NGENVFRVADQPSPVAIHAMLTACQSGNIDVALEKLQGIWDLGFSAVDIVTNMFRVVKTM 291

Query: 181 EELSDTQKAQICERIAQADKCLIDGADEYLQM 276
           + + +  + ++ + I Q    +++G    LQ+
Sbjct: 292 DSIPEFSRLEMLKEIGQTHMIILEGVQTLLQL 323


>sp|Q9HI47|RFCS_THEAC Replication factor C small subunit
           OS=Thermoplasma acidophilum GN=rfcS PE=3 SV=2
          Length = 318

 Score = 35.8 bits (81), Expect = 0.18
 Identities = 22/92 (23%), Positives = 42/92 (45%)
 Frame = +1

Query: 1   SSDNIISISGVVSDNVVHSFLQACRTGLFDQAQKAVADCTSYCYLDSQILSQLYDVVVPD 180
           S   I  I G  S   +   +     GLFD+A++ V     Y  L    + +     V  
Sbjct: 212 SPKKIYEIIGYASPEKIQKMISRAINGLFDEAREIVDGMLIYDGLSGIDIVRSLHSYVRS 271

Query: 181 EELSDTQKAQICERIAQADKCLIDGADEYLQM 276
             +S  QK +I + +A A+  +++G+++ +Q+
Sbjct: 272 SMISPKQKIEIIKALADAEFRIVEGSNDRIQL 303


>sp|Q977Z9|RFCS_THEVO Replication factor C small subunit
           OS=Thermoplasma volcanium GN=rfcS PE=3 SV=2
          Length = 318

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 21/92 (22%), Positives = 42/92 (45%)
 Frame = +1

Query: 1   SSDNIISISGVVSDNVVHSFLQACRTGLFDQAQKAVADCTSYCYLDSQILSQLYDVVVPD 180
           S   I  I G  S   V+  +     GLFD+A++ V        L    + +    +V  
Sbjct: 212 SPKKIYEIIGYASPESVNKLISRAINGLFDEARQIVDKMMIEDGLSGIDIVKSVHSIVRA 271

Query: 181 EELSDTQKAQICERIAQADKCLIDGADEYLQM 276
             +   QK +I + +A A+  +++G+++ +Q+
Sbjct: 272 SVVPPKQKIEIIKALADAEFRIVEGSNDRIQL 303
tr_hit_id A9NSN9
Definition tr|A9NSN9|A9NSN9_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 112
Score (bit) 132.0
E-value 2.0e-29
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960119|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_I20, 5'
         (616 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NSN9|A9NSN9_PICSI Putative uncharacterized protein OS=Picea...   132   2e-29
tr|A9SMZ4|A9SMZ4_PHYPA Predicted protein OS=Physcomitrella paten...   125   2e-27
tr|A7NVH0|A7NVH0_VITVI Chromosome chr18 scaffold_1, whole genome...   123   8e-27
tr|A5BRZ3|A5BRZ3_VITVI Putative uncharacterized protein OS=Vitis...   123   8e-27
tr|B4FQT5|B4FQT5_MAIZE Putative uncharacterized protein OS=Zea m...   119   1e-25
tr|B6T4T0|B6T4T0_MAIZE Replication factor C subunit 2 OS=Zea may...   118   3e-25
tr|B7FK39|B7FK39_MEDTR Putative uncharacterized protein OS=Medic...   117   7e-25
tr|Q9FXM3|Q9FXM3_ORYSJ cDNA clone:J033138A02, full insert sequen...   115   3e-24
tr|Q0IPQ0|Q0IPQ0_ORYSJ Os12g0176500 protein (Fragment) OS=Oryza ...   115   3e-24
tr|A2ZIL4|A2ZIL4_ORYSI Putative uncharacterized protein OS=Oryza...   115   3e-24
tr|Q93ZX1|Q93ZX1_ARATH Putative replication factor (At1g21690) (...   100   1e-19
tr|Q3ED76|Q3ED76_ARATH Uncharacterized protein At1g21690.2 OS=Ar...   100   1e-19
tr|Q9XI09|Q9XI09_ARATH F8K7.11 protein OS=Arabidopsis thaliana G...    91   5e-17
tr|Q6DRF4|Q6DRF4_DANRE Replication factor C subunit RFC4 OS=Dani...    89   2e-16
tr|A7S5R5|A7S5R5_NEMVE Predicted protein OS=Nematostella vectens...    89   2e-16
tr|B6NXS8|B6NXS8_BRAFL Putative uncharacterized protein OS=Branc...    85   4e-15
tr|B5X7D2|B5X7D2_SALSA Replication factor C subunit 4 OS=Salmo s...    84   5e-15
tr|B6P218|B6P218_BRAFL Putative uncharacterized protein OS=Branc...    84   9e-15
tr|B3RUC9|B3RUC9_TRIAD Putative uncharacterized protein OS=Trich...    82   2e-14
tr|B4F778|B4F778_RAT Rfc4 protein (Replication factor C (Activat...    82   3e-14
tr|Q5ZHL1|Q5ZHL1_CHICK Putative uncharacterized protein OS=Gallu...    81   4e-14
tr|Q76LD2|Q76LD2_XENLA Replication factor C p37 subunit (RFC2 pr...    80   1e-13
tr|Q28GP1|Q28GP1_XENTR Replication factor C (Activator 1) 4, 37k...    79   3e-13
tr|Q4SDY0|Q4SDY0_TETNG Chromosome undetermined SCAF14628, whole ...    76   1e-12
tr|B7QHT5|B7QHT5_IXOSC Replication factor C, subunit RFC4, putat...    69   2e-10
tr|Q29G67|Q29G67_DROPS GA20846 OS=Drosophila pseudoobscura pseud...    69   3e-10
tr|B4GW04|B4GW04_DROPE GL14564 OS=Drosophila persimilis GN=GL145...    69   3e-10
tr|B6JX85|B6JX85_SCHJP Replication factor C subunit 2 OS=Schizos...    67   6e-10
tr|B3MQX5|B3MQX5_DROAN GF21175 OS=Drosophila ananassae GN=GF2117...    67   8e-10
tr|A7EGJ1|A7EGJ1_SCLS1 Putative uncharacterized protein OS=Scler...    67   8e-10

>tr|A9NSN9|A9NSN9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 339

 Score =  132 bits (332), Expect = 2e-29
 Identities = 66/112 (58%), Positives = 84/112 (75%)
 Frame = +1

Query: 1   SSDNIISISGVVSDNVVHSFLQACRTGLFDQAQKAVADCTSYCYLDSQILSQLYDVVVPD 180
           SS+N+IS+SG+V   VV S  QAC+TG FD AQK V+D  +  +  SQI SQLYD+VV  
Sbjct: 228 SSNNLISVSGIVPKEVVQSLYQACKTGQFDLAQKEVSDIIAEGHPASQIFSQLYDMVVQA 287

Query: 181 EELSDTQKAQICERIAQADKCLIDGADEYLQMLDVASGTMRSFCNMPQDSTF 336
            ++SD  KA+I +R+A+ADKCLIDGADEYLQ+LDVAS  MRS CNM Q+  +
Sbjct: 288 TDISDETKARISQRLAEADKCLIDGADEYLQLLDVASNAMRSLCNMTQECCY 339


>tr|A9SMZ4|A9SMZ4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_186629 PE=4 SV=1
          Length = 338

 Score =  125 bits (315), Expect = 2e-27
 Identities = 62/112 (55%), Positives = 82/112 (73%)
 Frame = +1

Query: 1   SSDNIISISGVVSDNVVHSFLQACRTGLFDQAQKAVADCTSYCYLDSQILSQLYDVVVPD 180
           SS  IIS+SG+V D+V+   L+AC++G FD A + V D  +  +  SQILSQL+D VV  
Sbjct: 227 SSKEIISVSGIVPDSVLEGLLKACQSGQFDLAHQEVRDIIAEGHPVSQILSQLFDFVVQS 286

Query: 181 EELSDTQKAQICERIAQADKCLIDGADEYLQMLDVASGTMRSFCNMPQDSTF 336
             +SD QKA+I ER+A+ DKCLIDGADEYLQ++DVAS TMR+ CN  Q+ T+
Sbjct: 287 PNISDIQKARITERLAETDKCLIDGADEYLQLMDVASNTMRALCNQTQECTY 338


>tr|A7NVH0|A7NVH0_VITVI Chromosome chr18 scaffold_1, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00015431001
           PE=4 SV=1
          Length = 341

 Score =  123 bits (309), Expect = 8e-27
 Identities = 61/109 (55%), Positives = 84/109 (77%)
 Frame = +1

Query: 1   SSDNIISISGVVSDNVVHSFLQACRTGLFDQAQKAVADCTSYCYLDSQILSQLYDVVVPD 180
           SS ++IS+SGVV  +VV +   AC++G FD A K V +  +  Y  SQ+L QL+DVVV +
Sbjct: 229 SSKDLISVSGVVPQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVV-E 287

Query: 181 EELSDTQKAQICERIAQADKCLIDGADEYLQMLDVASGTMRSFCNMPQD 327
            ++SD QKA+IC+R+A+ADKCL+DGADEYLQ+LDVAS  MR+ CNMP++
Sbjct: 288 ADISDEQKARICKRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEE 336


>tr|A5BRZ3|A5BRZ3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_019805 PE=4 SV=1
          Length = 341

 Score =  123 bits (309), Expect = 8e-27
 Identities = 61/109 (55%), Positives = 84/109 (77%)
 Frame = +1

Query: 1   SSDNIISISGVVSDNVVHSFLQACRTGLFDQAQKAVADCTSYCYLDSQILSQLYDVVVPD 180
           SS ++IS+SGVV  +VV +   AC++G FD A K V +  +  Y  SQ+L QL+DVVV +
Sbjct: 229 SSKDLISVSGVVPQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVV-E 287

Query: 181 EELSDTQKAQICERIAQADKCLIDGADEYLQMLDVASGTMRSFCNMPQD 327
            ++SD QKA+IC+R+A+ADKCL+DGADEYLQ+LDVAS  MR+ CNMP++
Sbjct: 288 ADISDEQKARICKRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEE 336


>tr|B4FQT5|B4FQT5_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 339

 Score =  119 bits (298), Expect = 1e-25
 Identities = 57/112 (50%), Positives = 82/112 (73%)
 Frame = +1

Query: 1   SSDNIISISGVVSDNVVHSFLQACRTGLFDQAQKAVADCTSYCYLDSQILSQLYDVVVPD 180
           SS ++IS+SGV+ ++VV S L ACR+G FD A K V+   +  Y  SQ+++Q  DV+V  
Sbjct: 228 SSSDLISVSGVIPEDVVKSLLAACRSGEFDVANKEVSSIIADGYPVSQLMAQFLDVIVSA 287

Query: 181 EELSDTQKAQICERIAQADKCLIDGADEYLQMLDVASGTMRSFCNMPQDSTF 336
           +++ D QKA+IC+++ + DKCL+DGADEYLQ+LDVAS T+RS  NMP+   F
Sbjct: 288 DDIPDDQKARICKKLGETDKCLVDGADEYLQLLDVASETIRSLFNMPRTLVF 339


>tr|B6T4T0|B6T4T0_MAIZE Replication factor C subunit 2 OS=Zea mays
           PE=2 SV=1
          Length = 339

 Score =  118 bits (295), Expect = 3e-25
 Identities = 56/112 (50%), Positives = 82/112 (73%)
 Frame = +1

Query: 1   SSDNIISISGVVSDNVVHSFLQACRTGLFDQAQKAVADCTSYCYLDSQILSQLYDVVVPD 180
           SS ++IS+SGV+ ++VV S L ACR+G FD A K V+   +  Y  SQ+++Q  DV+V  
Sbjct: 228 SSSDLISVSGVIPEDVVKSLLAACRSGEFDVANKEVSSIIADGYPVSQLMAQFLDVIVSA 287

Query: 181 EELSDTQKAQICERIAQADKCLIDGADEYLQMLDVASGTMRSFCNMPQDSTF 336
           +++ D QKA+IC+++ + DKCL+DGADEYLQ+LDVAS T+R+  NMP+   F
Sbjct: 288 DDIPDDQKARICKKLGETDKCLVDGADEYLQLLDVASETIRALFNMPRTLVF 339


>tr|B7FK39|B7FK39_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 339

 Score =  117 bits (292), Expect = 7e-25
 Identities = 54/108 (50%), Positives = 82/108 (75%)
 Frame = +1

Query: 1   SSDNIISISGVVSDNVVHSFLQACRTGLFDQAQKAVADCTSYCYLDSQILSQLYDVVVPD 180
           SS ++IS+SG+V   VV + L+ACR+G FD A K V +  +  Y  SQ+L+QL++ +V +
Sbjct: 229 SSKDLISVSGIVPAEVVEALLKACRSGNFDLANKEVNNFIAEGYPVSQMLTQLFEAIVEE 288

Query: 181 EELSDTQKAQICERIAQADKCLIDGADEYLQMLDVASGTMRSFCNMPQ 324
            ++SD QKA+I +++ +ADKCL+DGADEYLQ+LDV S T+++ CNMP+
Sbjct: 289 NDISDEQKARISKKLGEADKCLVDGADEYLQLLDVVSNTIQALCNMPE 336


>tr|Q9FXM3|Q9FXM3_ORYSJ cDNA clone:J033138A02, full insert sequence
           OS=Oryza sativa subsp. japonica GN=OsRFC2 PE=2 SV=1
          Length = 339

 Score =  115 bits (287), Expect = 3e-24
 Identities = 55/112 (49%), Positives = 82/112 (73%)
 Frame = +1

Query: 1   SSDNIISISGVVSDNVVHSFLQACRTGLFDQAQKAVADCTSYCYLDSQILSQLYDVVVPD 180
           SS ++IS+SG + ++VV S L +C++G FD A K V +  +  Y  SQ++SQ  DV+V  
Sbjct: 228 SSTDLISVSGAIPEDVVKSLLASCKSGEFDVANKEVNNIIADGYPVSQLISQFLDVIVNA 287

Query: 181 EELSDTQKAQICERIAQADKCLIDGADEYLQMLDVASGTMRSFCNMPQDSTF 336
           +++ D QKA+IC+++ +ADKCL+DGADEYLQ+LDVAS T+R+  +MPQ   F
Sbjct: 288 DDIPDEQKARICKKLGEADKCLVDGADEYLQLLDVASETIRALFDMPQTLVF 339


>tr|Q0IPQ0|Q0IPQ0_ORYSJ Os12g0176500 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os12g0176500 PE=4 SV=1
          Length = 379

 Score =  115 bits (287), Expect = 3e-24
 Identities = 55/112 (49%), Positives = 82/112 (73%)
 Frame = +1

Query: 1   SSDNIISISGVVSDNVVHSFLQACRTGLFDQAQKAVADCTSYCYLDSQILSQLYDVVVPD 180
           SS ++IS+SG + ++VV S L +C++G FD A K V +  +  Y  SQ++SQ  DV+V  
Sbjct: 268 SSTDLISVSGAIPEDVVKSLLASCKSGEFDVANKEVNNIIADGYPVSQLISQFLDVIVNA 327

Query: 181 EELSDTQKAQICERIAQADKCLIDGADEYLQMLDVASGTMRSFCNMPQDSTF 336
           +++ D QKA+IC+++ +ADKCL+DGADEYLQ+LDVAS T+R+  +MPQ   F
Sbjct: 328 DDIPDEQKARICKKLGEADKCLVDGADEYLQLLDVASETIRALFDMPQTLVF 379


>tr|A2ZIL4|A2ZIL4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_37665 PE=4 SV=1
          Length = 339

 Score =  115 bits (287), Expect = 3e-24
 Identities = 55/112 (49%), Positives = 82/112 (73%)
 Frame = +1

Query: 1   SSDNIISISGVVSDNVVHSFLQACRTGLFDQAQKAVADCTSYCYLDSQILSQLYDVVVPD 180
           SS ++IS+SG + ++VV S L +C++G FD A K V +  +  Y  SQ++SQ  DV+V  
Sbjct: 228 SSTDLISVSGAIPEDVVKSLLASCKSGEFDVANKEVNNIIADGYPVSQLISQFLDVIVNA 287

Query: 181 EELSDTQKAQICERIAQADKCLIDGADEYLQMLDVASGTMRSFCNMPQDSTF 336
           +++ D QKA+IC+++ +ADKCL+DGADEYLQ+LDVAS T+R+  +MPQ   F
Sbjct: 288 DDIPDEQKARICKKLGEADKCLVDGADEYLQLLDVASETIRALFDMPQTLVF 339