DK960004 |
Clone id |
TST39A01NGRL0006_D14 |
Library |
TST39 |
Length |
670 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_D14. 5' end sequence. |
Accession |
DK960004 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3069Contig1 |
Sequence |
CAAGGCAGATGATTGCAACTTAATTCAGGAGCGAGTGTGTGTAATACATCGCCATTGCGA TTGCTCAGGATGACAGCGCTGTTTATGGGCTTTCTGTCTGGTCGCCCATTATCAAGCTTT CCATTTCTGCGCCAATCATTCAGCACCTGTTGTACGTTGAAATACTGAAATGTATCATCA AGCAAAAACATTTTCTACAACGAGTCTTGTGCACCATCGAGGCTCGGGACCACCAGAGCA TCATTTTACTCCAATTCCGAGCATGCCTATGAGCAATGAGGGAGGGGATATTGCGTCCAG AGTAGCAGCAGCATCCTCAAAGCAGCGACTACGATGGACCACGGAGCTACATGATCGGTT TGTTGAAGCTGTTACTCAGCTCGGGGGCCCAGATAGAGCTACACCAAAAGGGGTTCTAAG AGCCATGGGTGTTCAAGGTCTGACAATATATCATGTGAAAAGTCATCTTCAGAAGTATAG GCTTGCAAAGTACATTCCTGAATCTGGCAAAGAAGGGGAGAAGCTGGATGGACTGCCAAT TATACCAACCAACACTGAAGCTGCATCTAGTTTACAGATTACGGAAGCTTTGCGGATGCA GATGGAGGTTCAGAAGCGATTGCATGAGCAACTGGAGGTCCAGCAACAACTACAATTACG GGATGGAGGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q700D9 |
Definition |
sp|Q700D9|MYBF_ARATH Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana |
Align length |
70 |
Score (bit) |
73.6 |
E-value |
9.0e-13 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TGK9 |
Definition |
tr|A9TGK9|A9TGK9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
155 |
Score (bit) |
169.0 |
E-value |
2.0e-40 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960004|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_D14, 5' (670 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TGK9|A9TGK9_PHYPA Predicted protein OS=Physcomitrella paten... 169 2e-40 tr|A9TN01|A9TN01_PHYPA Predicted protein OS=Physcomitrella paten... 163 8e-39 tr|A7PTJ0|A7PTJ0_VITVI Chromosome chr8 scaffold_29, whole genome... 157 4e-37 tr|B4YEQ7|B4YEQ7_PHAVU Phosphate high response OS=Phaseolus vulg... 153 1e-35 tr|B7FJV7|B7FJV7_MEDTR Putative uncharacterized protein OS=Medic... 152 1e-35 tr|Q69V46|Q69V46_ORYSJ Os06g0609500 protein OS=Oryza sativa subs... 152 2e-35 tr|B3FNK5|B3FNK5_CUCSA Putative myb family transcription factor ... 152 2e-35 tr|A5C966|A5C966_VITVI Putative uncharacterized protein OS=Vitis... 151 4e-35 tr|B4F7W7|B4F7W7_MAIZE MYB-CC type transfactor OS=Zea mays PE=2 ... 150 5e-35 tr|A3BDG6|A3BDG6_ORYSJ Putative uncharacterized protein OS=Oryza... 149 1e-34 tr|A2YEX2|A2YEX2_ORYSI Putative uncharacterized protein OS=Oryza... 149 1e-34 tr|Q9SJW0|Q9SJW0_ARATH Transfactor-like protein OS=Arabidopsis t... 149 2e-34 tr|Q3LHL3|Q3LHL3_SOLTU MYB-CC type transfactor OS=Solanum tubero... 149 2e-34 tr|Q6F335|Q6F335_ORYSJ Os05g0491500 protein OS=Oryza sativa subs... 148 3e-34 tr|Q69TN6|Q69TN6_ORYSJ Os09g0299200 protein OS=Oryza sativa subs... 148 3e-34 tr|B8BEA4|B8BEA4_ORYSI Putative uncharacterized protein OS=Oryza... 148 3e-34 tr|A3BX47|A3BX47_ORYSJ Putative uncharacterized protein OS=Oryza... 148 3e-34 tr|A3B5D6|A3B5D6_ORYSJ Putative uncharacterized protein OS=Oryza... 148 3e-34 tr|B8AZI4|B8AZI4_ORYSI Putative uncharacterized protein OS=Oryza... 147 8e-34 tr|B4F7T0|B4F7T0_MAIZE Putative uncharacterized protein OS=Zea m... 146 1e-33 tr|B6UDE6|B6UDE6_MAIZE MYB transcription factor OS=Zea mays PE=2... 145 2e-33 tr|Q2HUG9|Q2HUG9_MEDTR Peptidase M22, glycoprotease; Homeodomain... 143 1e-32 tr|Q84QT0|Q84QT0_ORYSJ Os08g0346500 protein OS=Oryza sativa subs... 141 4e-32 tr|Q5IWM2|Q5IWM2_WHEAT MYB transcription factor OS=Triticum aest... 141 4e-32 tr|A2YU96|A2YU96_ORYSI Putative uncharacterized protein OS=Oryza... 141 4e-32 tr|B8LMR6|B8LMR6_PICSI Putative uncharacterized protein OS=Picea... 133 1e-29 tr|A9SA92|A9SA92_PHYPA Predicted protein OS=Physcomitrella paten... 130 7e-29 tr|B6SPC5|B6SPC5_MAIZE Putative uncharacterized protein OS=Zea m... 127 6e-28 tr|B4FMH9|B4FMH9_MAIZE Putative uncharacterized protein OS=Zea m... 127 6e-28 tr|B8LKH4|B8LKH4_PICSI Putative uncharacterized protein OS=Picea... 126 1e-27
>tr|A9TGK9|A9TGK9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_169970 PE=4 SV=1 Length = 896
Score = 169 bits (427), Expect = 2e-40 Identities = 96/155 (61%), Positives = 111/155 (71%), Gaps = 7/155 (4%) Frame = +2
Query: 176 HQAKTFSTTSLVHHRGSG----PPEHHFTPIPSMPMSNEGGDIASRVAAASSKQRLRWTT 343 +Q K FSTTSL+ R + P T + S+ GG S +++KQRLRWT Sbjct: 410 YQNKKFSTTSLMPQRSASQAPEPRGSSATGASTNSASSPGG--GSGGGGSAAKQRLRWTP 467
Query: 344 ELHDRFVEAVTQLGGPDRATPKGVLRAMGVQGLTIYHVKSHLQKYRLAKYIPESGKEG-- 517 ELHDRFV+AVTQLGGPDRATPKGVLR MGVQGLTIYHVKSHLQKYRLAKYIPES +G Sbjct: 468 ELHDRFVDAVTQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYIPESSSDGGK 527
Query: 518 -EKLDGLPIIPTNTEAASSLQITEALRMQMEVQKR 619 EK + ++PT +A S +QITEALRMQMEVQKR Sbjct: 528 SEKKNPADVLPT-LDATSGIQITEALRMQMEVQKR 561
>tr|A9TN01|A9TN01_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170944 PE=4 SV=1 Length = 795
Score = 163 bits (413), Expect = 8e-39 Identities = 94/154 (61%), Positives = 109/154 (70%), Gaps = 6/154 (3%) Frame = +2
Query: 176 HQAKTFSTTSLVHHRG-SGPPEHHFTPIPSMPMSNEGGDIA-SRVAAASSKQRLRWTTEL 349 +Q K FSTTSL+ R S PE + ++ G S +++KQRLRWT EL Sbjct: 328 YQNKKFSTTSLMPQRSASQAPEPRGSSAAGASTNSAGSPGGGSGGGGSAAKQRLRWTPEL 387
Query: 350 HDRFVEAVTQLGGPDRATPKGVLRAMGVQGLTIYHVKSHLQKYRLAKYIPES----GKEG 517 HDRFV+AVTQLGGPDRATPKGVLR MGVQGLTIYHVKSHLQKYRLAKYIPES GK Sbjct: 388 HDRFVDAVTQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYIPESLSDGGKSD 447
Query: 518 EKLDGLPIIPTNTEAASSLQITEALRMQMEVQKR 619 +K + ++P +A S +QITEALRMQMEVQKR Sbjct: 448 KKKNQADLLPA-LDATSGIQITEALRMQMEVQKR 480
>tr|A7PTJ0|A7PTJ0_VITVI Chromosome chr8 scaffold_29, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023376001 PE=4 SV=1 Length = 302
Score = 157 bits (398), Expect = 4e-37 Identities = 87/152 (57%), Positives = 104/152 (68%), Gaps = 2/152 (1%) Frame = +2
Query: 170 MYHQAKTFSTTSLVHHRGSGPPEHHFTPIPSMPMSNEGGDIASRVAAASSKQRLRWTTEL 349 MYH K FST SLV H+ G P+ ++ S S KQRLRWT++L Sbjct: 1 MYHPKK-FSTASLVPHKAQGSE-----PLATVGALGGSSVKNSNPTGGSGKQRLRWTSDL 54
Query: 350 HDRFVEAVTQLGGPDRATPKGVLRAMGVQGLTIYHVKSHLQKYRLAKYIPESGKEGEKLD 529 HDRFV+A+TQLGGPDRATPKGVLR MGV GLTIYHVKSHLQKYRLAKY+PES +G K + Sbjct: 55 HDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDE 114
Query: 530 --GLPIIPTNTEAASSLQITEALRMQMEVQKR 619 G ++ ++A +QI EALR+QMEVQKR Sbjct: 115 KKGSGDSGSSMDSAPGVQINEALRLQMEVQKR 146
>tr|B4YEQ7|B4YEQ7_PHAVU Phosphate high response OS=Phaseolus vulgaris GN=PHR1 PE=2 SV=1 Length = 327
Score = 153 bits (386), Expect = 1e-35 Identities = 88/153 (57%), Positives = 107/153 (69%), Gaps = 3/153 (1%) Frame = +2
Query: 170 MYHQAKTFSTTSLVHHRGSGPPEHHFTPIPSMPMSNEGGDIASRVAAASSKQRLRWTTEL 349 MYH +K + SLV +H +M N GG+ S + +SKQRLRWT EL Sbjct: 1 MYH-SKNVPSASLVGGNSLVHGQHIDCGGSAMDHGN-GGNSHSNNSNLNSKQRLRWTHEL 58
Query: 350 HDRFVEAVTQLGGPDRATPKGVLRAMGVQGLTIYHVKSHLQKYRLAKYIPESGK-EGEKL 526 H+RFV+AV QLGGPDRATPKGVLR MGVQGLTIYHVKSHLQKYRLAKY+P+S EG+K Sbjct: 59 HERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDEGKKA 118
Query: 527 DGLPI--IPTNTEAASSLQITEALRMQMEVQKR 619 D + +N + +S +QITEAL++QMEVQKR Sbjct: 119 DKKETGDVLSNLDGSSGMQITEALKLQMEVQKR 151
>tr|B7FJV7|B7FJV7_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 330
Score = 152 bits (385), Expect = 1e-35 Identities = 89/155 (57%), Positives = 106/155 (68%), Gaps = 5/155 (3%) Frame = +2
Query: 170 MYHQAKTFSTTSLVHHRGSGPPEH--HFTPIPSMPMSNEGGDIASRVAAASSKQRLRWTT 343 MYH +SLV GS P H H S GG+ + + +SKQRLRWT Sbjct: 1 MYHPTNV-PDSSLV---GSNPLVHGQHIDSGRSAMDPGSGGNSLANNSNLNSKQRLRWTH 56
Query: 344 ELHDRFVEAVTQLGGPDRATPKGVLRAMGVQGLTIYHVKSHLQKYRLAKYIPE-SGKEGE 520 ELH+RFV+AV QLGGPDRATPKGVLR MGVQGLTIYHVKSHLQKYRLAKY+P+ S EG+ Sbjct: 57 ELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYVPDCSSDEGK 116
Query: 521 KLDGLPI--IPTNTEAASSLQITEALRMQMEVQKR 619 K D + +N + +S +QITEAL++QMEVQKR Sbjct: 117 KTDKKETGDMLSNLDGSSGMQITEALKLQMEVQKR 151
>tr|Q69V46|Q69V46_ORYSJ Os06g0609500 protein OS=Oryza sativa subsp. japonica GN=P0556B08.32 PE=2 SV=1 Length = 329
Score = 152 bits (384), Expect = 2e-35 Identities = 85/152 (55%), Positives = 109/152 (71%), Gaps = 4/152 (2%) Frame = +2
Query: 176 HQAKTFSTTSLVHHRGSGPPEHH--FTPIPSMPMSNEGGDIASRVAAASSKQRLRWTTEL 349 ++ K FS+ L H+ P H+ I + +SN GG+ ++ AA +QRLRWT +L Sbjct: 2 YEPKPFSSIVLAHN---DPVSHNQQIERINNNVVSNSGGNSSNSNFAA--RQRLRWTDDL 56
Query: 350 HDRFVEAVTQLGGPDRATPKGVLRAMGVQGLTIYHVKSHLQKYRLAKYIPESGKEGEKLD 529 HDRFV+AVTQLGGPDRATPKG+LR MGVQGLTIYHVKSHLQKYRLAKYIP+ +G K D Sbjct: 57 HDRFVDAVTQLGGPDRATPKGILRIMGVQGLTIYHVKSHLQKYRLAKYIPDPTADGAKSD 116
Query: 530 --GLPIIPTNTEAASSLQITEALRMQMEVQKR 619 L + + E++S ++I EAL++QMEVQKR Sbjct: 117 KKDLGDLLADIESSSGMEIGEALKLQMEVQKR 148
>tr|B3FNK5|B3FNK5_CUCSA Putative myb family transcription factor OS=Cucumis sativus PE=2 SV=1 Length = 262
Score = 152 bits (383), Expect = 2e-35 Identities = 76/115 (66%), Positives = 91/115 (79%), Gaps = 2/115 (1%) Frame = +2
Query: 281 GGDIASRVAAASSKQRLRWTTELHDRFVEAVTQLGGPDRATPKGVLRAMGVQGLTIYHVK 460 G + S+ +SKQRLRWT +LH+RFV AV QLGGPDRATPKGVLR MGVQGLTIYHVK Sbjct: 6 GNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLTIYHVK 65
Query: 461 SHLQKYRLAKYIPESGKEGEKLD--GLPIIPTNTEAASSLQITEALRMQMEVQKR 619 SHLQKYRLAKY+P+S +G+K D I +N + +S +QITEAL++QMEVQKR Sbjct: 66 SHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSSGMQITEALKLQMEVQKR 120
>tr|A5C966|A5C966_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035498 PE=4 SV=1 Length = 306
Score = 151 bits (381), Expect = 4e-35 Identities = 75/115 (65%), Positives = 93/115 (80%), Gaps = 2/115 (1%) Frame = +2
Query: 281 GGDIASRVAAASSKQRLRWTTELHDRFVEAVTQLGGPDRATPKGVLRAMGVQGLTIYHVK 460 GG+ + + +SKQRLRWT ELH+RFV+AV QLGGPDRATPKGVLR MGVQGLTIYHVK Sbjct: 6 GGNSLNNNPSLASKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVK 65
Query: 461 SHLQKYRLAKYIPESGKEGEKLDGLPI--IPTNTEAASSLQITEALRMQMEVQKR 619 SHLQKYRLAKY+P+S +G+K D + ++ + +S +QITEAL++QMEVQKR Sbjct: 66 SHLQKYRLAKYLPDSSSDGKKADKKESGDMLSSLDGSSGMQITEALKLQMEVQKR 120
>tr|B4F7W7|B4F7W7_MAIZE MYB-CC type transfactor OS=Zea mays PE=2 SV=1 Length = 312
Score = 150 bits (380), Expect = 5e-35 Identities = 84/144 (58%), Positives = 100/144 (69%), Gaps = 12/144 (8%) Frame = +2
Query: 224 SGPPEHHFTPIPS---------MPMSNEG-GDIASRVAAASSKQRLRWTTELHDRFVEAV 373 S PE F P P+ + +N G G+ A+ + +QRLRWT ELH+RFVEAV Sbjct: 3 SPKPESSFGPNPNSGTHQQQMELTGANMGPGNGANNNTNMAGRQRLRWTNELHERFVEAV 62
Query: 374 TQLGGPDRATPKGVLRAMGVQGLTIYHVKSHLQKYRLAKYIPESGKEGEKLDGLP--IIP 547 TQLGGPDRATPKGVLR MGVQGLTIYHVKSHLQKYRLAKYIP++ +G K D + Sbjct: 63 TQLGGPDRATPKGVLRIMGVQGLTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLL 122
Query: 548 TNTEAASSLQITEALRMQMEVQKR 619 E +S LQI+EAL++QMEVQKR Sbjct: 123 AGLEGSSGLQISEALKLQMEVQKR 146
>tr|A3BDG6|A3BDG6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_021088 PE=4 SV=1 Length = 319
Score = 149 bits (377), Expect = 1e-34 Identities = 83/152 (54%), Positives = 109/152 (71%), Gaps = 4/152 (2%) Frame = +2
Query: 176 HQAKTFSTTSLVHHRGSGPPEHH--FTPIPSMPMSNEGGDIASRVAAASSKQRLRWTTEL 349 ++ K FS+ L H+ P H+ I + +SN GG+ ++ AA +QRLRWT +L Sbjct: 2 YEPKPFSSIVLAHN---DPVSHNQQIERINNNVVSNSGGNSSNSNFAA--RQRLRWTDDL 56
Query: 350 HDRFVEAVTQLGGPDRATPKGVLRAMGVQGLTIYHVKSHLQKYRLAKYIPESGKEGEKLD 529 HDRFV+AVTQLGGPDRATPKG+LR MGVQGLTIYHVKSHLQKYRLAKYIP+ +G K D Sbjct: 57 HDRFVDAVTQLGGPDRATPKGILRIMGVQGLTIYHVKSHLQKYRLAKYIPDPTADGAKSD 116
Query: 530 --GLPIIPTNTEAASSLQITEALRMQMEVQKR 619 L + + E++S ++I EAL++QMEVQ++ Sbjct: 117 KKDLGDLLADIESSSGMEIGEALKLQMEVQRQ 148
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