DK959993 |
Clone id |
TST39A01NGRL0006_D03 |
Library |
TST39 |
Length |
444 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_D03. 5' end sequence. |
Accession |
DK959993 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
TATAACTGGGTGAGGAGAATAGAAACACCGCATCTGAGCAGCAGATCCACGAGACGAGAG GCTGCATTGGATCACACACACTTACAGAGAGACATAGAGAGATAGCGCTCTGCTAGTGGA TCTGATTCTCCTCTGAGAGAGGTGAAGCAAAGGATGGCGAGATGGGTCTCTCTTTCACCT AGCTGTTTAGCCGGTTATTTGCGAATAAGGAGATGCGCATTTTGATGGTGGGTCTCGATG CTGCTGGGAAAACCACCATTCTCTACTAGCTCACGCTCGGCGAGATCTTCACCACCTTCC CCGCAATCGGATTTTATGGGGAAACTGATGAGTGCAAAAACATCATGTTTACGGTTTGTG ATGTCTGACGACACTACCATATTCGACCTTTGTGGACGCACTACTTTCAAAACACCCTAG GCTTGATCTATGTGGTGGATAGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O48920 |
Definition |
sp|O48920|ARF_VIGUN ADP-ribosylation factor OS=Vigna unguiculata |
Align length |
94 |
Score (bit) |
134.0 |
E-value |
1.0e-31 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A3BHW2 |
Definition |
tr|A3BHW2|A3BHW2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica |
Align length |
110 |
Score (bit) |
141.0 |
E-value |
2.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959993|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_D03, 5' (444 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A3BHW2|A3BHW2_ORYSJ Putative uncharacterized protein OS=Oryza... 141 2e-32 tr|Q677H6|Q677H6_HYAOR ADP-ribosylation factor (Fragment) OS=Hya... 136 5e-31 tr|Q6JV86|Q6JV86_POPTO ADP-ribosylation factor 1 (Fragment) OS=P... 134 2e-30 tr|Q38JU3|Q38JU3_DAUCA ADP ribosylation factor 002 OS=Daucus car... 134 2e-30 tr|Q38HU6|Q38HU6_SOLTU ADP-ribosylation factor 1-like protein OS... 134 2e-30 tr|Q20BN2|Q20BN2_PANGI ADP-ribosylation factor-like protein OS=P... 134 2e-30 tr|B7FIW2|B7FIW2_MEDTR Putative uncharacterized protein OS=Medic... 134 2e-30 tr|B7FI12|B7FI12_MEDTR Putative uncharacterized protein OS=Medic... 134 2e-30 tr|B3TLM7|B3TLM7_ELAGV ADP ribosylation factor 002 OS=Elaeis gui... 134 2e-30 tr|A9P9X4|A9P9X4_POPTR Putative uncharacterized protein OS=Popul... 134 2e-30 tr|A9P9U3|A9P9U3_POPTR Putative uncharacterized protein OS=Popul... 134 2e-30 tr|A7Q0T1|A7Q0T1_VITVI Chromosome chr7 scaffold_42, whole genome... 134 2e-30 tr|A7PRL9|A7PRL9_VITVI Chromosome chr14 scaffold_27, whole genom... 134 2e-30 tr|Q9LYJ3|Q9LYJ3_ARATH ADP-ribosylation factor-like protein OS=A... 133 4e-30 tr|Q7XZG0|Q7XZG0_ORYSJ Os03g0811900 protein OS=Oryza sativa subs... 133 4e-30 tr|Q76ME3|Q76ME3_WHEAT ADP-ribosylation factor OS=Triticum aesti... 133 4e-30 tr|Q70XK1|Q70XK1_HORVD ADP-ribosylation factor 1-like protein OS... 133 4e-30 tr|Q6S4R7|Q6S4R7_MEDSA ADP-ribosylation factor OS=Medicago sativ... 133 4e-30 tr|Q5QQ33|Q5QQ33_MEDTR ADP-ribosylation factor 1 OS=Medicago tru... 133 4e-30 tr|Q3HVM8|Q3HVM8_SOLTU Putative uncharacterized protein OS=Solan... 133 4e-30 tr|Q10CA9|Q10CA9_ORYSJ ADP-ribosylation factor, putative, expres... 133 4e-30 tr|Q0JIB5|Q0JIB5_ORYSJ cDNA clone:001-047-G02, full insert seque... 133 4e-30 tr|Q0DH67|Q0DH67_ORYSJ Os05g0489600 protein OS=Oryza sativa subs... 133 4e-30 tr|B8AB93|B8AB93_ORYSI Putative uncharacterized protein OS=Oryza... 133 4e-30 tr|B7FL30|B7FL30_MEDTR Putative uncharacterized protein OS=Medic... 133 4e-30 tr|B7FKH3|B7FKH3_MEDTR Putative uncharacterized protein OS=Medic... 133 4e-30 tr|B4FFK3|B4FFK3_MAIZE Putative uncharacterized protein OS=Zea m... 133 4e-30 tr|A7QNZ2|A7QNZ2_VITVI Chromosome chr1 scaffold_135, whole genom... 133 4e-30 tr|A7PM80|A7PM80_VITVI Chromosome chr14 scaffold_21, whole genom... 133 4e-30 tr|A5CB74|A5CB74_VITVI Putative uncharacterized protein OS=Vitis... 133 4e-30
>tr|A3BHW2|A3BHW2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_022634 PE=4 SV=1 Length = 314
Score = 141 bits (355), Expect = 2e-32 Identities = 77/110 (70%), Positives = 83/110 (75%), Gaps = 1/110 (0%) Frame = +3
Query: 117 WI*FSSERGEAKDG-EMGLSFT*LFSRLFANKEMRILMVGLDAAGKTTILY*LTLGEIFT 293 W+ F E GE ++G +MGL+F LFSRLFA KEMRILMVGLDAAGKTTILY L LGEI T Sbjct: 118 WVGFGGEGGEKEEGGKMGLAFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVT 177
Query: 294 TFPAIGFYGETDECKNIMFTVCDV*RHYHIRPLWTHYFQNTLGLIYVVDS 443 T P IGF ET E KNI FTV DV IRPLW HYFQNT GLI+VVDS Sbjct: 178 TIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 227
>tr|Q677H6|Q677H6_HYAOR ADP-ribosylation factor (Fragment) OS=Hyacinthus orientalis GN=ARF PE=2 SV=1 Length = 199
Score = 136 bits (343), Expect = 5e-31 Identities = 74/95 (77%), Positives = 75/95 (78%) Frame = +3
Query: 159 EMGLSFT*LFSRLFANKEMRILMVGLDAAGKTTILY*LTLGEIFTTFPAIGFYGETDECK 338 EMGLSFT LFSRLFA KEMRILMVGLDAAGKTTILY L LGEI TT P IGF ET E K Sbjct: 18 EMGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK 77
Query: 339 NIMFTVCDV*RHYHIRPLWTHYFQNTLGLIYVVDS 443 NI FTV DV IRPLW HYFQNT GLI+VVDS Sbjct: 78 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 112
>tr|Q6JV86|Q6JV86_POPTO ADP-ribosylation factor 1 (Fragment) OS=Populus tomentosa PE=2 SV=1 Length = 195
Score = 134 bits (338), Expect = 2e-30 Identities = 73/94 (77%), Positives = 74/94 (78%) Frame = +3
Query: 162 MGLSFT*LFSRLFANKEMRILMVGLDAAGKTTILY*LTLGEIFTTFPAIGFYGETDECKN 341 MGLSFT LFSRLFA KEMRILMVGLDAAGKTTILY L LGEI TT P IGF ET E KN Sbjct: 1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 342 IMFTVCDV*RHYHIRPLWTHYFQNTLGLIYVVDS 443 I FTV DV IRPLW HYFQNT GLI+VVDS Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 94
>tr|Q38JU3|Q38JU3_DAUCA ADP ribosylation factor 002 OS=Daucus carota GN=adprf-002 PE=2 SV=1 Length = 181
Score = 134 bits (338), Expect = 2e-30 Identities = 73/94 (77%), Positives = 74/94 (78%) Frame = +3
Query: 162 MGLSFT*LFSRLFANKEMRILMVGLDAAGKTTILY*LTLGEIFTTFPAIGFYGETDECKN 341 MGLSFT LFSRLFA KEMRILMVGLDAAGKTTILY L LGEI TT P IGF ET E KN Sbjct: 1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 342 IMFTVCDV*RHYHIRPLWTHYFQNTLGLIYVVDS 443 I FTV DV IRPLW HYFQNT GLI+VVDS Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 94
>tr|Q38HU6|Q38HU6_SOLTU ADP-ribosylation factor 1-like protein OS=Solanum tuberosum PE=2 SV=1 Length = 181
Score = 134 bits (338), Expect = 2e-30 Identities = 73/94 (77%), Positives = 74/94 (78%) Frame = +3
Query: 162 MGLSFT*LFSRLFANKEMRILMVGLDAAGKTTILY*LTLGEIFTTFPAIGFYGETDECKN 341 MGLSFT LFSRLFA KEMRILMVGLDAAGKTTILY L LGEI TT P IGF ET E KN Sbjct: 1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 342 IMFTVCDV*RHYHIRPLWTHYFQNTLGLIYVVDS 443 I FTV DV IRPLW HYFQNT GLI+VVDS Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 94
>tr|Q20BN2|Q20BN2_PANGI ADP-ribosylation factor-like protein OS=Panax ginseng PE=2 SV=1 Length = 181
Score = 134 bits (338), Expect = 2e-30 Identities = 73/94 (77%), Positives = 74/94 (78%) Frame = +3
Query: 162 MGLSFT*LFSRLFANKEMRILMVGLDAAGKTTILY*LTLGEIFTTFPAIGFYGETDECKN 341 MGLSFT LFSRLFA KEMRILMVGLDAAGKTTILY L LGEI TT P IGF ET E KN Sbjct: 1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 342 IMFTVCDV*RHYHIRPLWTHYFQNTLGLIYVVDS 443 I FTV DV IRPLW HYFQNT GLI+VVDS Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 94
>tr|B7FIW2|B7FIW2_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 181
Score = 134 bits (338), Expect = 2e-30 Identities = 73/94 (77%), Positives = 74/94 (78%) Frame = +3
Query: 162 MGLSFT*LFSRLFANKEMRILMVGLDAAGKTTILY*LTLGEIFTTFPAIGFYGETDECKN 341 MGLSFT LFSRLFA KEMRILMVGLDAAGKTTILY L LGEI TT P IGF ET E KN Sbjct: 1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 342 IMFTVCDV*RHYHIRPLWTHYFQNTLGLIYVVDS 443 I FTV DV IRPLW HYFQNT GLI+VVDS Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 94
>tr|B7FI12|B7FI12_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 181
Score = 134 bits (338), Expect = 2e-30 Identities = 73/94 (77%), Positives = 74/94 (78%) Frame = +3
Query: 162 MGLSFT*LFSRLFANKEMRILMVGLDAAGKTTILY*LTLGEIFTTFPAIGFYGETDECKN 341 MGLSFT LFSRLFA KEMRILMVGLDAAGKTTILY L LGEI TT P IGF ET E KN Sbjct: 1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 342 IMFTVCDV*RHYHIRPLWTHYFQNTLGLIYVVDS 443 I FTV DV IRPLW HYFQNT GLI+VVDS Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 94
>tr|B3TLM7|B3TLM7_ELAGV ADP ribosylation factor 002 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 181
Score = 134 bits (338), Expect = 2e-30 Identities = 73/94 (77%), Positives = 74/94 (78%) Frame = +3
Query: 162 MGLSFT*LFSRLFANKEMRILMVGLDAAGKTTILY*LTLGEIFTTFPAIGFYGETDECKN 341 MGLSFT LFSRLFA KEMRILMVGLDAAGKTTILY L LGEI TT P IGF ET E KN Sbjct: 1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 342 IMFTVCDV*RHYHIRPLWTHYFQNTLGLIYVVDS 443 I FTV DV IRPLW HYFQNT GLI+VVDS Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 94
>tr|A9P9X4|A9P9X4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 181
Score = 134 bits (338), Expect = 2e-30 Identities = 73/94 (77%), Positives = 74/94 (78%) Frame = +3
Query: 162 MGLSFT*LFSRLFANKEMRILMVGLDAAGKTTILY*LTLGEIFTTFPAIGFYGETDECKN 341 MGLSFT LFSRLFA KEMRILMVGLDAAGKTTILY L LGEI TT P IGF ET E KN Sbjct: 1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 342 IMFTVCDV*RHYHIRPLWTHYFQNTLGLIYVVDS 443 I FTV DV IRPLW HYFQNT GLI+VVDS Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 94
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