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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK959801
Clone id TST39A01NGRL0005_K21
Library
Length 651
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_K21. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GCATGCTTTGGCCCAGGAGACCCGTGGGGGGACAGGTGGAGAAGCAAGTGACACTGCAGC
CTTCCTTATAACCTATATGTAGCTTGGGCAATTGCATTTTTCACTAAAATCATTTTCTGT
TGTCAAAAGAAAGTTTATGAGATGTAATTATTGTTTACTCTTATGTAAGTTCAAAATATC
ATTAATTGAGATCTTTGCCTTGGGGCTTGATTGATCCAGCCAAGCAAACAGTTGCATATG
TAAAACAAAAAGATTGTGAAAGCTTTGGTTAAGCAGGTTGCTAAGCATATCCATCACTGG
TTTGAAAGAGCAGCATTTCTAAATCCTTATCTATGGGAAGGAGTCTTGTGAAGATATAGT
AATTATTGTCTGCTAGTCTTTTTCGCCCAGATCATCTGGATTACAAAAGAGTCTTGTAAA
ATCAAAATAGTCCTGGAGATCTCACAGGAATGGCCACAAGTTTAGGTTGGTCTGGGTCAG
ATAGGATGGACATAATTTGAGAATCACCTGTGAAACTCTGCAGGGTGCGGATTTATCGCA
TGTGTTCTGCACACAAGGAGCAGCAACTGTGATCAAAAGCTATAGTCCAGAACTCATTGT
CCATCCTATTCTTGAGGAATCTCATGATGTGAAGTAACTTTTTCTTGCTCA
■■Homology search results ■■ -
sp_hit_id Q9CZ42
Definition sp|Q9CZ42|CARKD_MOUSE Carbohydrate kinase domain-containing protein OS=Mus musculus
Align length 37
Score (bit) 57.8
E-value 5.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959801|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_K21, 5'
         (651 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9CZ42|CARKD_MOUSE Carbohydrate kinase domain-containing prot...    58   5e-08
sp|Q8IW45|CARKD_HUMAN Carbohydrate kinase domain-containing prot...    56   2e-07
sp|Q5R824|CARKD_PONAB Carbohydrate kinase domain-containing prot...    55   3e-07
sp|O94347|YCB3_SCHPO Uncharacterized protein C61.03 OS=Schizosac...    51   5e-06
sp|P36059|YKP1_YEAST Uncharacterized protein YKL151C OS=Saccharo...    47   7e-05
sp|P32740|YNH2_CAEEL Uncharacterized protein R107.2 OS=Caenorhab...    46   1e-04
sp|Q3IRX3|FOLD_NATPD Bifunctional protein folD OS=Natronomonas p...    27   6.4  
sp|Q6FJC4|OAZ_CANGA Ornithine decarboxylase antizyme OS=Candida ...    30   8.5  

>sp|Q9CZ42|CARKD_MOUSE Carbohydrate kinase domain-containing protein
           OS=Mus musculus GN=Carkd PE=1 SV=1
          Length = 343

 Score = 57.8 bits (138), Expect = 5e-08
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = +2

Query: 524 GADLSHVFCTQGAATVIKSYSPELIVHPILEESHDVK 634
           GADL+HVFC + AA VIKSYSPELIVHP+L+ S+ V+
Sbjct: 96  GADLTHVFCAREAAPVIKSYSPELIVHPVLDSSNAVE 132


>sp|Q8IW45|CARKD_HUMAN Carbohydrate kinase domain-containing protein
           OS=Homo sapiens GN=CARKD PE=1 SV=1
          Length = 347

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 25/36 (69%), Positives = 29/36 (80%)
 Frame = +2

Query: 524 GADLSHVFCTQGAATVIKSYSPELIVHPILEESHDV 631
           GADLSHVFC   AA VIK+YSPELIVHP+L+  + V
Sbjct: 100 GADLSHVFCASAAAPVIKAYSPELIVHPVLDSPNAV 135


>sp|Q5R824|CARKD_PONAB Carbohydrate kinase domain-containing protein
           OS=Pongo abelii GN=CARKD PE=2 SV=1
          Length = 329

 Score = 55.1 bits (131), Expect = 3e-07
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = +2

Query: 524 GADLSHVFCTQGAATVIKSYSPELIVHPILE 616
           GADLSHVFC   AA VIK+YSPELIVHP+L+
Sbjct: 82  GADLSHVFCASAAAPVIKAYSPELIVHPVLD 112


>sp|O94347|YCB3_SCHPO Uncharacterized protein C61.03
           OS=Schizosaccharomyces pombe GN=SPCC61.03 PE=2 SV=1
          Length = 327

 Score = 51.2 bits (121), Expect = 5e-06
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +2

Query: 518 LQGADLSHVFCTQGAATVIKSYSPELIVHPILEE 619
           L G+D SH+FC + AA VIKSYSP+LIVHP L E
Sbjct: 56  LFGSDQSHIFCEKEAANVIKSYSPDLIVHPFLRE 89


>sp|P36059|YKP1_YEAST Uncharacterized protein YKL151C
           OS=Saccharomyces cerevisiae GN=YKL151C PE=1 SV=1
          Length = 337

 Score = 47.4 bits (111), Expect = 7e-05
 Identities = 21/36 (58%), Positives = 25/36 (69%)
 Frame = +2

Query: 518 LQGADLSHVFCTQGAATVIKSYSPELIVHPILEESH 625
           L G DL+HV C   A TVIKSY+P L+VHP L  S+
Sbjct: 57  LMGCDLTHVICEYNAGTVIKSYTPNLMVHPYLRMSN 92


>sp|P32740|YNH2_CAEEL Uncharacterized protein R107.2
           OS=Caenorhabditis elegans GN=R107.2 PE=2 SV=3
          Length = 307

 Score = 46.2 bits (108), Expect = 1e-04
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +2

Query: 524 GADLSHVFCTQGAATVIKSYSPELIVHP 607
           GADL H+FC   AA VIK YSP+LIVHP
Sbjct: 47  GADLIHIFCDPDAAQVIKGYSPDLIVHP 74


>sp|Q3IRX3|FOLD_NATPD Bifunctional protein folD OS=Natronomonas
           pharaonis (strain DSM 2160 / ATCC 35678) GN=folD PE=3
           SV=1
          Length = 297

 Score = 27.3 bits (59), Expect(2) = 6.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 213 DPAKQTVAYVKQKDCESFG 269
           DPA +T   +KQ+DCE  G
Sbjct: 42  DPASETYVNMKQRDCEEVG 60



 Score = 22.3 bits (46), Expect(2) = 6.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 387 PDHLDYKRVL*NQNSPGDLTG 449
           PDH+DY+ V+   +   D+ G
Sbjct: 100 PDHVDYREVIRRVDPQKDVDG 120


>sp|Q6FJC4|OAZ_CANGA Ornithine decarboxylase antizyme OS=Candida
           glabrata GN=OAZ1 PE=3 SV=2
          Length = 255

 Score = 30.4 bits (67), Expect = 8.5
 Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
 Frame = +1

Query: 235 HM*NKKIVKALVKQVAKHIHHWFERAAFLNP--------YLWEGVL*RYSNYCLLVFFAQ 390
           H  +KK  K LVK+V  H++     +A            ++W  V  RY+   L ++F +
Sbjct: 96  HGEHKKFQKKLVKRVGNHLNSLVNNSASKPTGSMTVNVRHVWRNVGDRYTLLYLPLYFKE 155

Query: 391 IIWITKESCKIKIVLEISQE 450
           +IW         +++  ++E
Sbjct: 156 LIWCKANGSIFHVIIPHTKE 175
tr_hit_id B8LL57
Definition tr|B8LL57|B8LL57_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 37
Score (bit) 70.9
E-value 7.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959801|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_K21, 5'
         (651 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LL57|B8LL57_PICSI Putative uncharacterized protein OS=Picea...    71   7e-11
tr|A9RY03|A9RY03_PHYPA Predicted protein OS=Physcomitrella paten...    69   2e-10
tr|B4FJJ9|B4FJJ9_MAIZE Putative uncharacterized protein OS=Zea m...    69   3e-10
tr|Q53Q78|Q53Q78_ORYSJ Os11g0276300 protein OS=Oryza sativa subs...    68   6e-10
tr|B8BK19|B8BK19_ORYSI Putative uncharacterized protein OS=Oryza...    68   6e-10
tr|A7NWH0|A7NWH0_VITVI Chromosome chr5 scaffold_2, whole genome ...    65   3e-09
tr|A9PF79|A9PF79_POPTR Putative uncharacterized protein OS=Popul...    65   4e-09
tr|Q94AF2|Q94AF2_ARATH AT5g19150/T24G5_50 OS=Arabidopsis thalian...    65   5e-09
tr|B6LQ65|B6LQ65_BRAFL Putative uncharacterized protein OS=Branc...    60   1e-07
tr|B6LJC7|B6LJC7_BRAFL Putative uncharacterized protein OS=Branc...    60   1e-07
tr|A8KB11|A8KB11_DANRE Zgc:171429 protein OS=Danio rerio GN=zgc:...    59   2e-07
tr|Q4S0I7|Q4S0I7_TETNG Chromosome 2 SCAF14781, whole genome shot...    59   3e-07
tr|Q0IIW2|Q0IIW2_XENTR Putative uncharacterized protein LOC54906...    58   4e-07
tr|A7RRZ8|A7RRZ8_NEMVE Predicted protein OS=Nematostella vectens...    58   6e-07
tr|B4LQY5|B4LQY5_DROVI GJ22066 OS=Drosophila virilis GN=GJ22066 ...    56   2e-06
tr|B4DKX7|B4DKX7_HUMAN cDNA FLJ61130 OS=Homo sapiens PE=2 SV=1         56   2e-06
tr|B3KSJ9|B3KSJ9_HUMAN cDNA FLJ36452 fis, clone THYMU2013916 OS=...    56   2e-06
tr|Q17NP0|Q17NP0_AEDAE Putative uncharacterized protein OS=Aedes...    55   3e-06
tr|B4JPR5|B4JPR5_DROGR GH13567 OS=Drosophila grimshawi GN=GH1356...    55   3e-06
tr|B4KJ08|B4KJ08_DROMO GI19565 OS=Drosophila mojavensis GN=GI195...    55   4e-06
tr|B8NB75|B8NB75_ASPFL YjeF domain protein OS=Aspergillus flavus...    55   4e-06
tr|A5DQE5|A5DQE5_PICGU Putative uncharacterized protein OS=Pichi...    55   4e-06
tr|B4NNZ9|B4NNZ9_DROWI GK19231 OS=Drosophila willistoni GN=GK192...    55   5e-06
tr|Q5B0D6|Q5B0D6_EMENI Putative uncharacterized protein OS=Emeri...    55   5e-06
tr|B5DHB2|B5DHB2_DROPS GA25285 OS=Drosophila pseudoobscura pseud...    54   6e-06
tr|B4GKK0|B4GKK0_DROPE GL26101 OS=Drosophila persimilis GN=GL261...    54   6e-06
tr|B0EVB0|B0EVB0_ENTDI Putative uncharacterized protein OS=Entam...    54   6e-06
tr|B3MX40|B3MX40_DROAN GF15143 OS=Drosophila ananassae GN=GF1514...    54   1e-05
tr|Q7PZM4|Q7PZM4_ANOGA AGAP011983-PA (Fragment) OS=Anopheles gam...    53   1e-05
tr|B4MZ34|B4MZ34_DROWI GK18910 OS=Drosophila willistoni GN=GK189...    53   1e-05

>tr|B8LL57|B8LL57_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 420

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = +2

Query: 524 GADLSHVFCTQGAATVIKSYSPELIVHPILEESHDVK 634
           GADLSHVFCTQ AATVIKSYSPELIVHP+LEES+++K
Sbjct: 145 GADLSHVFCTQDAATVIKSYSPELIVHPVLEESYNIK 181


>tr|A9RY03|A9RY03_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_121160 PE=4 SV=1
          Length = 342

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 31/36 (86%), Positives = 34/36 (94%)
 Frame = +2

Query: 524 GADLSHVFCTQGAATVIKSYSPELIVHPILEESHDV 631
           GADL+HVFCT GAATVIKSYSPELIVHP+L ES+DV
Sbjct: 58  GADLAHVFCTSGAATVIKSYSPELIVHPVLHESYDV 93


>tr|B4FJJ9|B4FJJ9_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 398

 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = +2

Query: 524 GADLSHVFCTQGAATVIKSYSPELIVHPILEESHDVK 634
           GADLSHVFCT+ AATVIKSYSPELIVHPILEES+ V+
Sbjct: 132 GADLSHVFCTKDAATVIKSYSPELIVHPILEESYSVR 168


>tr|Q53Q78|Q53Q78_ORYSJ Os11g0276300 protein OS=Oryza sativa subsp.
           japonica GN=Os11g0276300 PE=4 SV=1
          Length = 371

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 32/36 (88%), Positives = 34/36 (94%)
 Frame = +2

Query: 524 GADLSHVFCTQGAATVIKSYSPELIVHPILEESHDV 631
           GADLSHVFCT+ AATVIKSYSPELIVHPILEES+ V
Sbjct: 105 GADLSHVFCTRDAATVIKSYSPELIVHPILEESYSV 140


>tr|B8BK19|B8BK19_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_35794 PE=4 SV=1
          Length = 370

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 32/36 (88%), Positives = 34/36 (94%)
 Frame = +2

Query: 524 GADLSHVFCTQGAATVIKSYSPELIVHPILEESHDV 631
           GADLSHVFCT+ AATVIKSYSPELIVHPILEES+ V
Sbjct: 104 GADLSHVFCTRDAATVIKSYSPELIVHPILEESYSV 139


>tr|A7NWH0|A7NWH0_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00019917001
           PE=4 SV=1
          Length = 319

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +2

Query: 524 GADLSHVFCTQGAATVIKSYSPELIVHPILEESHDVK 634
           GADLSHVFCT+ AA VIKSYSPELIVHP+LEES+ V+
Sbjct: 54  GADLSHVFCTKDAAPVIKSYSPELIVHPLLEESYSVR 90


>tr|A9PF79|A9PF79_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 370

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 30/36 (83%), Positives = 33/36 (91%)
 Frame = +2

Query: 524 GADLSHVFCTQGAATVIKSYSPELIVHPILEESHDV 631
           GADLSHVFCT+ AA VIKSYSPELIVHP+LEES+ V
Sbjct: 102 GADLSHVFCTKDAAPVIKSYSPELIVHPVLEESYSV 137


>tr|Q94AF2|Q94AF2_ARATH AT5g19150/T24G5_50 OS=Arabidopsis thaliana
           GN=At5g19150 PE=2 SV=1
          Length = 365

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 29/36 (80%), Positives = 33/36 (91%)
 Frame = +2

Query: 524 GADLSHVFCTQGAATVIKSYSPELIVHPILEESHDV 631
           GADLSHVFCT+ AA VIKSYSPELIVHP+LEES+ +
Sbjct: 100 GADLSHVFCTKDAAPVIKSYSPELIVHPVLEESYSI 135


>tr|B6LQ65|B6LQ65_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_210872 PE=4 SV=1
          Length = 254

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = +2

Query: 524 GADLSHVFCTQGAATVIKSYSPELIVHPILEE 619
           GADLSH+FCT  AATVIKSYSPELIVHP+L++
Sbjct: 56  GADLSHIFCTSDAATVIKSYSPELIVHPLLDK 87


>tr|B6LJC7|B6LJC7_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_207730 PE=4 SV=1
          Length = 254

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = +2

Query: 524 GADLSHVFCTQGAATVIKSYSPELIVHPILEE 619
           GADLSH+FCT  AATVIKSYSPELIVHP+L++
Sbjct: 56  GADLSHIFCTSDAATVIKSYSPELIVHPLLDK 87