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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK959701
Clone id TST39A01NGRL0005_G15
Library
Length 606
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_G15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
CGCTCTTAGGAGCATCTCAACTGGCAGTTGAAGGAAGATATGCACAGTCAATTTTTCTTA
TGGCTGTGCACATTGGCGTAGTTCGTTATGGAGTGGCAAAGATTCACAAGGGAAGTCCAC
ATCATCACTTTGCAGGTCTCAGTCTTGCAGTGGGGATAGTGCTGTTCTGGCACTCACCAG
AGAGAGCAATCATGGGACCGTTGATCATTACCATTCTCATAGCTGTAAAGAACCTATATT
TGGAGTTTGTTTTGAAGACAGAAAAGCAAAGCTAACAAAAATGGGTCTTCATTTACATTC
GATCCCTGTGCTGCAGAAGGCAGACAGAGTTTCTTTTCTGAGAATGATCATAAGCAAGCC
ACTAGCAGTTTTTCATCATTTATAGTGACAGGAAGTGATATTTTATATAGAAGCTGGGCT
CTGGCCTTCTCGTCTTTATGAAAATTCTAATGCTGGCCCCCGAAGAGAGTTGGCATGTGA
AAAAGCTTCAATTATAGGAGACTTTTGTCACAAATTGGTGAAGGTAAAAAAACATTGTAT
TTCTTTGCAGGCAGGCATTTCACTCCCTGCACCTCCCNAAAAGGAGCTCCCATCTTGCGT
GCCTTT
■■Homology search results ■■ -
sp_hit_id Q9H330
Definition sp|Q9H330|CI005_HUMAN Transmembrane protein C9orf5 OS=Homo sapiens
Align length 73
Score (bit) 33.5
E-value 0.86
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959701|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_G15, 5'
         (606 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9H330|CI005_HUMAN Transmembrane protein C9orf5 OS=Homo sapie...    33   0.86 
sp|P09217|KPCZ_RAT Protein kinase C zeta type OS=Rattus norvegic...    31   5.6  
sp|Q02956|KPCZ_MOUSE Protein kinase C zeta type OS=Mus musculus ...    31   5.6  
sp|Q05513|KPCZ_HUMAN Protein kinase C zeta type OS=Homo sapiens ...    31   5.6  
sp|Q6M130|HEM1_METMP Glutamyl-tRNA reductase OS=Methanococcus ma...    31   5.6  
sp|O19111|KPCZ_RABIT Protein kinase C zeta type OS=Oryctolagus c...    30   7.3  

>sp|Q9H330|CI005_HUMAN Transmembrane protein C9orf5 OS=Homo sapiens
           GN=C9orf5 PE=1 SV=2
          Length = 911

 Score = 33.5 bits (75), Expect = 0.86
 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
 Frame = +3

Query: 30  EGRYAQSIFLMAVHIGVVRYGVAKIHK---GSPHHHFAGLSLAVGIVLFWHSPERAIMGP 200
           +G   ++I L+  H+    +    I+    G  H +  GL++A G   ++   E AI+GP
Sbjct: 770 QGLGCKAILLLIFHLLPTYFVDTAIYSDISGGGHPYLTGLAVAGGA--YYLGLEGAIIGP 827

Query: 201 LIITILIAVKNLY 239
           +++ IL+   N+Y
Sbjct: 828 ILLCILVVASNIY 840


>sp|P09217|KPCZ_RAT Protein kinase C zeta type OS=Rattus norvegicus
           GN=Prkcz PE=1 SV=2
          Length = 592

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = -2

Query: 293 NEDPFLLALLFCLQNKLQI*VLYSYENGNDQRSHDCSLW*VPEQHYPHCKTETC 132
           + +PFL+ L  C Q   ++ ++  Y NG D   H      +PE+H      E C
Sbjct: 308 SSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEIC 361


>sp|Q02956|KPCZ_MOUSE Protein kinase C zeta type OS=Mus musculus
           GN=Prkcz PE=1 SV=1
          Length = 592

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = -2

Query: 293 NEDPFLLALLFCLQNKLQI*VLYSYENGNDQRSHDCSLW*VPEQHYPHCKTETC 132
           + +PFL+ L  C Q   ++ ++  Y NG D   H      +PE+H      E C
Sbjct: 308 SSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEIC 361


>sp|Q05513|KPCZ_HUMAN Protein kinase C zeta type OS=Homo sapiens
           GN=PRKCZ PE=1 SV=4
          Length = 592

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = -2

Query: 293 NEDPFLLALLFCLQNKLQI*VLYSYENGNDQRSHDCSLW*VPEQHYPHCKTETC 132
           + +PFL+ L  C Q   ++ ++  Y NG D   H      +PE+H      E C
Sbjct: 308 SSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEIC 361


>sp|Q6M130|HEM1_METMP Glutamyl-tRNA reductase OS=Methanococcus
           maripaludis GN=hemA PE=3 SV=1
          Length = 382

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +3

Query: 12  ASQLAVEGRYAQSIFLMAVHIGVVRYGVAKIHKGSPHHHFAGLSLA 149
           A +L    RY  S+FL A+H+G       KI++GS     A + LA
Sbjct: 104 ARELKKTSRYLDSVFLKAIHVGQRARTETKINEGSVSIGSAAVELA 149


>sp|O19111|KPCZ_RABIT Protein kinase C zeta type OS=Oryctolagus
           cuniculus GN=PRKCZ PE=2 SV=1
          Length = 591

 Score = 30.4 bits (67), Expect = 7.3
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -2

Query: 287 DPFLLALLFCLQNKLQI*VLYSYENGNDQRSHDCSLW*VPEQHYPHCKTETC 132
           +PFL+ L  C Q   ++ ++  Y NG D   H      +PE+H      E C
Sbjct: 309 NPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEIC 360
tr_hit_id A9TUL5
Definition tr|A9TUL5|A9TUL5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 84
Score (bit) 79.7
E-value 1.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959701|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_G15, 5'
         (606 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TUL5|A9TUL5_PHYPA Predicted protein OS=Physcomitrella paten...    80   1e-13
tr|A7PM25|A7PM25_VITVI Chromosome chr14 scaffold_21, whole genom...    74   7e-12
tr|Q5Z6I5|Q5Z6I5_ORYSJ Os06g0297700 protein OS=Oryza sativa subs...    73   1e-11
tr|B8B0V2|B8B0V2_ORYSI Putative uncharacterized protein OS=Oryza...    73   1e-11
tr|A3BAX9|A3BAX9_ORYSJ Putative uncharacterized protein OS=Oryza...    73   1e-11
tr|Q93XX1|Q93XX1_ARATH Putative uncharacterized protein At5g5596...    72   3e-11
tr|A7Q9D1|A7Q9D1_VITVI Chromosome chr19 scaffold_66, whole genom...    70   1e-10
tr|B4F921|B4F921_MAIZE Putative uncharacterized protein OS=Zea m...    69   2e-10
tr|Q9FG69|Q9FG69_ARATH Genomic DNA, chromosome 5, P1 clone:MYN21...    56   1e-06
tr|Q8DW91|Q8DW91_STRMU Putative uncharacterized protein OS=Strep...    38   0.52 
tr|B6IPK5|B6IPK5_RHOCS Acyltransferase domain, membrane protein ...    35   3.4  
tr|Q5CZ47|Q5CZ47_CAEEL Protein M01F1.4b, partially confirmed by ...    35   3.4  
tr|Q21453|Q21453_CAEEL Protein M01F1.4a, partially confirmed by ...    35   3.4  
tr|A7I1C6|A7I1C6_CAMHC Acid membrane antigen A OS=Campylobacter ...    35   4.4  
tr|B7C3K1|B7C3K1_9FIRM Putative uncharacterized protein OS=Roseb...    34   5.8  
tr|B7AV37|B7AV37_9BACE Putative uncharacterized protein OS=Bacte...    34   5.8  
tr|B1AZA8|B1AZA8_MOUSE Likely ortholog of H. sapiens chromosome ...    34   7.6  
tr|B1AZA5|B1AZA5_MOUSE Likely ortholog of H. sapiens chromosome ...    34   7.6  
tr|A7VPY2|A7VPY2_9CLOT Putative uncharacterized protein OS=Clost...    34   7.6  
tr|B4DSW7|B4DSW7_HUMAN cDNA FLJ57827 OS=Homo sapiens PE=2 SV=1         34   7.6  
tr|B6ID33|B6ID33_9ZZZZ Putative uncharacterized protein C9orf5 (...    33   9.9  

>tr|A9TUL5|A9TUL5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_198444 PE=4 SV=1
          Length = 623

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 41/84 (48%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
 Frame = +3

Query: 9   GASQLAVEGRYAQSIFLMAVHIGVVRYGVAKIHKGSPHH--HFAGLSLAVGIVLFWHSPE 182
           G +QLA+EGRY ++  L+ +H+  + YG++KI+   P H  +  GLS+A G+ LF  + E
Sbjct: 532 GGAQLALEGRYGEAAVLVILHVYGMEYGLSKIYLEIPGHSGYLTGLSIAGGMALFSPALE 591

Query: 183 RAIMGPLIITILIAVKNLYLEFVL 254
            AI+GPLI+T+L+A KNLY EFVL
Sbjct: 592 GAILGPLIMTVLLAAKNLYGEFVL 615


>tr|A7PM25|A7PM25_VITVI Chromosome chr14 scaffold_21, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020657001
           PE=4 SV=1
          Length = 591

 Score = 73.9 bits (180), Expect = 7e-12
 Identities = 39/86 (45%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
 Frame = +3

Query: 12  ASQLAVEGRYAQSIFLMAVHIGVVRYGVAKIHKGSP--HHHFAGLSLAVGIVLFWHSPER 185
           A+QLA+E +Y ++I L A+H+ ++ YG   I    P  + +  GLS+  GI LF    E 
Sbjct: 495 AAQLAMEAKYIEAISLTAIHLILLDYGTTAIQDEIPGQNAYLTGLSILGGIALFPSVLEG 554

Query: 186 AIMGPLIITILIAVKNLYLEFVLKTE 263
           AIMGPL++T++IA+KNLY+EFVL ++
Sbjct: 555 AIMGPLLMTVMIALKNLYVEFVLASD 580


>tr|Q5Z6I5|Q5Z6I5_ORYSJ Os06g0297700 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0055N24.35 PE=4 SV=1
          Length = 648

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 37/92 (40%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
 Frame = +3

Query: 3   LLGASQLAVEGRYAQSIFLMAVHIGVVRYGVAKIHKGSPHH--HFAGLSLAVGIVLFWHS 176
           +  A QL +EGRY  +I +  VH+ ++ YG   I +  P +  +  GLS+  G+ LF ++
Sbjct: 555 IFAAGQLLMEGRYVLAIVVTVVHLIIMDYGTTVIQEDIPGYNGYLTGLSIIGGMALFPNA 614

Query: 177 PERAIMGPLIITILIAVKNLYLEFVLKTEKQS 272
            E AI+GPLI+T+++A+KNLY EFVL   +++
Sbjct: 615 LEGAILGPLIMTVVMALKNLYTEFVLADSEET 646


>tr|B8B0V2|B8B0V2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_22633 PE=4 SV=1
          Length = 542

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 37/92 (40%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
 Frame = +3

Query: 3   LLGASQLAVEGRYAQSIFLMAVHIGVVRYGVAKIHKGSPHH--HFAGLSLAVGIVLFWHS 176
           +  A QL +EGRY  +I +  VH+ ++ YG   I +  P +  +  GLS+  G+ LF ++
Sbjct: 449 IFAAGQLLMEGRYVLAIVVTVVHLIIMDYGTTVIQEDIPGYNGYLTGLSIIGGMALFPNA 508

Query: 177 PERAIMGPLIITILIAVKNLYLEFVLKTEKQS 272
            E AI+GPLI+T+++A+KNLY EFVL   +++
Sbjct: 509 LEGAILGPLIMTVVMALKNLYTEFVLADSEET 540


>tr|A3BAX9|A3BAX9_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_020201 PE=4 SV=1
          Length = 456

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 37/92 (40%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
 Frame = +3

Query: 3   LLGASQLAVEGRYAQSIFLMAVHIGVVRYGVAKIHKGSPHH--HFAGLSLAVGIVLFWHS 176
           +  A QL +EGRY  +I +  VH+ ++ YG   I +  P +  +  GLS+  G+ LF ++
Sbjct: 363 IFAAGQLLMEGRYVLAIVVTVVHLIIMDYGTTVIQEDIPGYNGYLTGLSIIGGMALFPNA 422

Query: 177 PERAIMGPLIITILIAVKNLYLEFVLKTEKQS 272
            E AI+GPLI+T+++A+KNLY EFVL   +++
Sbjct: 423 LEGAILGPLIMTVVMALKNLYTEFVLADSEET 454


>tr|Q93XX1|Q93XX1_ARATH Putative uncharacterized protein At5g55960;
           MYN21.7 (Putative uncharacterized protein At5g55960)
           OS=Arabidopsis thaliana GN=At5g55960/MYN21.7 PE=2 SV=1
          Length = 648

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 38/88 (43%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
 Frame = +3

Query: 12  ASQLAVEGRYAQSIFLMAVHIGVVRYGVAKIHKGSP--HHHFAGLSLAVGIVLFWHSPER 185
           A QL +EGRY  ++ L   H+ ++ YG ++I    P  + +  GLS+  G+ LF  + E 
Sbjct: 559 ALQLVLEGRYIVAVILSVTHLVLMEYGASEIQDDIPGSNAYLTGLSIIGGVTLFPSALEG 618

Query: 186 AIMGPLIITILIAVKNLYLEFVLKTEKQ 269
           AIMGPLI T++IA+K+LY EFVL   K+
Sbjct: 619 AIMGPLITTVVIALKDLYAEFVLNEPKK 646


>tr|A7Q9D1|A7Q9D1_VITVI Chromosome chr19 scaffold_66, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00033425001
           PE=4 SV=1
          Length = 649

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
 Frame = +3

Query: 18  QLAVEGRYAQSIFLMAVHIGVVRYGVAKIHKGSPHH--HFAGLSLAVGIVLFWHSPERAI 191
           QL +E RY  +I L  +H+ ++ YG ++I +  P +  +  GLS+  G+ LF  + E AI
Sbjct: 560 QLVLESRYILAITLSVIHLALMEYGASEIQEDIPGYSAYLTGLSIIGGMTLFPSALEGAI 619

Query: 192 MGPLIITILIAVKNLYLEFVLKTEKQ 269
           MGPLI T++I +K LY EFVL   KQ
Sbjct: 620 MGPLITTVVIGLKELYTEFVLDGPKQ 645


>tr|B4F921|B4F921_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 654

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
 Frame = +3

Query: 3   LLGASQLAVEGRYAQSIFLMAVHIGVVRYGVAKIHKGSPHH--HFAGLSLAVGIVLFWHS 176
           +    QL +EGRY  ++ +  +H+ ++ YG   I +  P +  +  GLS+  G+ LF ++
Sbjct: 561 IFATGQLLMEGRYVLALVVTVIHLMLMDYGTTTILEDIPGYNGYLTGLSIIGGMTLFPNA 620

Query: 177 PERAIMGPLIITILIAVKNLYLEFVL 254
            E AI+GPLI+T++IA+KNLY EFVL
Sbjct: 621 LEGAILGPLIMTVVIALKNLYTEFVL 646


>tr|Q9FG69|Q9FG69_ARATH Genomic DNA, chromosome 5, P1 clone:MYN21
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 678

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 32/118 (27%)
 Frame = +3

Query: 12  ASQLAVEGRYAQSIFLMAVHIGVVRYGVAKIHKGSP--HHHFAGLSLAVGIVLFWHSPE- 182
           A QL +EGRY  ++ L   H+ ++ YG ++I    P  + +  GLS+  G+ LF  + E 
Sbjct: 559 ALQLVLEGRYIVAVILSVTHLVLMEYGASEIQDDIPGSNAYLTGLSIIGGVTLFPSALEV 618

Query: 183 -----------------------------RAIMGPLIITILIAVKNLYLEFVLKTEKQ 269
                                         AIMGPLI T++IA+K+LY EFVL   K+
Sbjct: 619 RKLKDWVFMKFGTKIGDFVMFFSGILLLQGAIMGPLITTVVIALKDLYAEFVLNEPKK 676


>tr|Q8DW91|Q8DW91_STRMU Putative uncharacterized protein
           OS=Streptococcus mutans GN=SMU_177 PE=4 SV=1
          Length = 406

 Score = 37.7 bits (86), Expect = 0.52
 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
 Frame = +3

Query: 3   LLGASQLAVEGRYAQSIFLMAVHIGVVRYGVAKIHKGSPHHHF-----AGLSLAVGIVLF 167
           L G     V+   AQ I+L  V   +V YG A +++   HHHF       LSL V I LF
Sbjct: 108 LFGEVNFDVDNHIAQPIWLFQVLGALVFYGAALLNRKLKHHHFQLLKWLFLSLFVYITLF 167

Query: 168 W 170
           W
Sbjct: 168 W 168