DK959640 |
Clone id |
TST39A01NGRL0005_E01 |
Library |
TST39 |
Length |
683 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_E01. 5' end sequence. |
Accession |
DK959640 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GAAGAAATGGTTGTGCTACAAGGTGTGGGCTCGAAATGGGTTCTTGCAGGAAGGGGATGC TATGATAGCAACTTGCATTCTTGGGGGCCTCCTTCACCGCGTTCCTGCCCTCACAATGTG TTTCCTGTGGTGGCTATGGCAGAGCTCCAGCAACAAGATGAGCAGACTGTAGACGAGGAG AGGTTCCGAAGCTCCCGCAATCCCACTACTCGTGGCTGGTTCTATGATAATTTTGTCAAG GACCACACCATGGAGGCCAAACTTAGCAAGTTCAAGTCTGACGTTGCTGCCCGCAATGGC TTTGTCGGTTCCTTGTTCAATGACGCTTTCAAGTACACAGCTTGGATCGAGATCCACAGA AAGCTGACAGAAAGGAACCTGGAGAGTATCCCTTGCAAGGAAGCCTTTGAACTAGGCCAG TCTAATCAAGTTGTTCTTCTGGATGTCCGGGAGCCTGATGAGTATGAGAAGGTTCATGTA GAAAACTCAAAGAGCGCTCCTCTTTTTCGGCAGATTCAAGGGAATGATTTGAAAGCAAAC ATGAGGAGGCTAGGGTATGCAATGATGACAGATTTTGCTGGCACAGAGAGAAATCCACTT TTTATTGAGCAAGCTGTAGAAGCTGTAGGTGGCGACAAAACAAAGAAAGTTGTGGTAATG TGCAGCATTTGGCGGAACGTTGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6P4L9 |
Definition |
sp|Q6P4L9|NFRKB_XENTR Nuclear factor related to kappa-B-binding protein OS=Xenopus tropicalis |
Align length |
41 |
Score (bit) |
35.4 |
E-value |
0.28 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P164 |
Definition |
tr|A9P164|A9P164_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
161 |
Score (bit) |
197.0 |
E-value |
4.0e-49 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959640|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0005_E01, 5' (683 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9P164|A9P164_PICSI Putative uncharacterized protein OS=Picea... 197 4e-49 tr|A9SF85|A9SF85_PHYPA Predicted protein OS=Physcomitrella paten... 196 1e-48 tr|B8LMI9|B8LMI9_PICSI Putative uncharacterized protein OS=Picea... 194 6e-48 tr|A8JEQ7|A8JEQ7_CHLRE Predicted protein OS=Chlamydomonas reinha... 68 6e-10 tr|A9SIV6|A9SIV6_PHYPA Predicted protein (Fragment) OS=Physcomit... 67 8e-10 tr|Q9T092|Q9T092_ARATH Putative uncharacterized protein AT4g2770... 66 2e-09 tr|Q94A65|Q94A65_ARATH AT4g27700/T29A15_190 OS=Arabidopsis thali... 66 2e-09 tr|Q8LEU5|Q8LEU5_ARATH Putative uncharacterized protein OS=Arabi... 66 2e-09 tr|A7QEY9|A7QEY9_VITVI Chromosome chr16 scaffold_86, whole genom... 64 9e-09 tr|B6SR15|B6SR15_MAIZE Rhodanese-like domain containing protein ... 64 1e-08 tr|A9NUD6|A9NUD6_PICSI Putative uncharacterized protein OS=Picea... 61 6e-08 tr|A8JIG5|A8JIG5_CHLRE Predicted protein OS=Chlamydomonas reinha... 60 1e-07 tr|Q69NF7|Q69NF7_ORYSJ Os09g0530000 protein OS=Oryza sativa subs... 60 1e-07 tr|B8BDT3|B8BDT3_ORYSI Putative uncharacterized protein OS=Oryza... 60 1e-07 tr|A3C0V6|A3C0V6_ORYSJ Putative uncharacterized protein OS=Oryza... 60 1e-07 tr|B7FHB8|B7FHB8_MEDTR Putative uncharacterized protein OS=Medic... 60 2e-07 tr|A9PIY4|A9PIY4_POPJC Putative uncharacterized protein OS=Popul... 58 5e-07 tr|A4RQH3|A4RQH3_OSTLU Predicted protein OS=Ostreococcus lucimar... 47 0.001 tr|A8I382|A8I382_CHLRE Rhodanese-like protein OS=Chlamydomonas r... 44 0.007 tr|A8J9I8|A8J9I8_CHLRE Predicted protein OS=Chlamydomonas reinha... 43 0.016 tr|Q9SR92|Q9SR92_ARATH T16O11.14 protein (Putative rhodanese fam... 40 0.14 tr|Q8RY72|Q8RY72_ARATH Putative rhodanese family protein (Fragme... 40 0.14 tr|B2TM57|B2TM57_CLOBB Pyridine nucleotide-disulphide oxidoreduc... 39 0.24 tr|Q8LBR6|Q8LBR6_ARATH Rhodanese-like family protein OS=Arabidop... 39 0.24 tr|B2V2T9|B2V2T9_CLOBA Pyridine nucleotide-disulphide oxidoreduc... 39 0.31 tr|A8UTI4|A8UTI4_9AQUI Probable ATP /GTP binding protein OS=Hydr... 39 0.31 tr|A8SA72|A8SA72_9FIRM Putative uncharacterized protein OS=Faeca... 39 0.31 tr|Q015Z4|Q015Z4_OSTTA Chromosome 07 contig 1, DNA sequence OS=O... 39 0.31 tr|A7PVU0|A7PVU0_VITVI Chromosome chr8 scaffold_34, whole genome... 39 0.31 tr|A1SZI2|A1SZI2_PSYIN Rhodanese domain protein OS=Psychromonas ... 39 0.40
>tr|A9P164|A9P164_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 255
Score = 197 bits (502), Expect = 4e-49 Identities = 99/161 (61%), Positives = 118/161 (73%) Frame = +1
Query: 187 RSSRNPTTRGWFYDNFVKDHTMEAKLSKFKSDVAARNGFVGSLFNDAFKYTAWIEIHRKL 366 + S N +GWFY+ FV + TM+AKL KFK DVAA+NGFVGS F+D+FKYTAWIE+HRKL Sbjct: 40 QKSGNKNKQGWFYNTFVANQTMDAKLDKFKGDVAAKNGFVGSWFDDSFKYTAWIEVHRKL 99
Query: 367 TERNLESIPCKEAFELGQSNQVVLLDVREPDEYEKVHVENSKSAPLFRQIQGNDLKANMR 546 TERNL+SI CKEA + N +LLDVRE ++EKVH E + +APLFR IQG+ LK+NMR Sbjct: 100 TERNLKSIECKEAQSRAKFNGAILLDVRESQDFEKVHAEGACNAPLFRLIQGDSLKSNMR 159
Query: 547 RLGYAMMTDFAGTERNPLFIEQAVEAVGGDKTKKVVVMCSI 669 RLGYA +TDFAGT VGGDK K VVVMC I Sbjct: 160 RLGYAFLTDFAGT-------------VGGDKRKVVVVMCQI 187
>tr|A9SF85|A9SF85_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_128722 PE=4 SV=1 Length = 197
Score = 196 bits (498), Expect = 1e-48 Identities = 90/140 (64%), Positives = 114/140 (81%) Frame = +1
Query: 250 MEAKLSKFKSDVAARNGFVGSLFNDAFKYTAWIEIHRKLTERNLESIPCKEAFELGQSNQ 429 MEAKLSKF++DV ARNG+VGS F D+FKYTAW+++HR LTER L+ + C+EA+ +S + Sbjct: 1 MEAKLSKFQNDVKARNGYVGSWFEDSFKYTAWVQVHRVLTERGLQDVDCQEAYNRIKSAK 60
Query: 430 VVLLDVREPDEYEKVHVENSKSAPLFRQIQGNDLKANMRRLGYAMMTDFAGTERNPLFIE 609 + +DVRE D+Y H E +KSAPLFR IQGND+K+NMRRLGYA++TDF GTERNP F+ Sbjct: 61 AIAIDVREADDYANAHAEGAKSAPLFRLIQGNDMKSNMRRLGYALLTDFKGTERNPDFVA 120
Query: 610 QAVEAVGGDKTKKVVVMCSI 669 A EAVGGDKTK+V+V CSI Sbjct: 121 AATEAVGGDKTKQVIVYCSI 140
>tr|B8LMI9|B8LMI9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 279
Score = 194 bits (492), Expect = 6e-48 Identities = 99/172 (57%), Positives = 124/172 (72%), Gaps = 11/172 (6%) Frame = +1
Query: 187 RSSRNPTTRGWFYDNFVKDHTMEAKLSKFKSDVAARNGFVGSLFNDAFKYTAWIEIHRKL 366 + S N +GWFY+ FV + TM+AKL KFK DVAA+NGFVGS F+D+FKYTAWIE+HRKL Sbjct: 40 QKSGNKNKQGWFYNTFVANQTMDAKLDKFKGDVAAKNGFVGSWFDDSFKYTAWIEVHRKL 99
Query: 367 TERNLESIPCKEAFELGQSNQVVLLDVREPDEYEKVHVENSKSAPLFRQIQGNDLKANMR 546 TERNL+SI CKEA + N +LLDVRE ++EKVH E + +APLFR IQG+ LK+NMR Sbjct: 100 TERNLKSIECKEAQSRAKFNGAILLDVRESQDFEKVHAEGACNAPLFRLIQGDSLKSNMR 159
Query: 547 ----------RLGYAMMTDFAGT-ERNPLFIEQAVEAVGGDKTKKVVVMCSI 669 + GY + + + + ERNP FI QA++AVGGDK K VVVMC I Sbjct: 160 FSPFKREVLLKFGYLKLKNTSTSFERNPEFINQAMDAVGGDKRKVVVVMCQI 211
>tr|A8JEQ7|A8JEQ7_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_185663 PE=4 SV=1 Length = 275
Score = 67.8 bits (164), Expect = 6e-10 Identities = 38/112 (33%), Positives = 61/112 (54%) Frame = +1
Query: 334 YTAWIEIHRKLTERNLESIPCKEAFELGQSNQVVLLDVREPDEYEKVHVENSKSAPLFRQ 513 Y W IH L + L S+ +EA L + L+DVR D+Y K H E + S P++R Sbjct: 96 YVVWPAIHTLLVSKGLRSVTPEEARILTEEQGWTLVDVRLGDDYLKNHAEGAISLPIYRY 155
Query: 514 IQGNDLKANMRRLGYAMMTDFAGTERNPLFIEQAVEAVGGDKTKKVVVMCSI 669 ++G N+++ A+ TER+P F ++A+ + K +KVV+MC+I Sbjct: 156 VEGTGFWDNVKKAAMAVGFAMRATERDPGFADKALGQL--KKNQKVVLMCAI 205
>tr|A9SIV6|A9SIV6_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_18148 PE=4 SV=1 Length = 171
Score = 67.4 bits (163), Expect = 8e-10 Identities = 38/107 (35%), Positives = 58/107 (54%) Frame = +1
Query: 343 WIEIHRKLTERNLESIPCKEAFELGQSNQVVLLDVREPDEYEKVHVENSKSAPLFRQIQG 522 W L + NL S+ K+A L + +LDVR +E+ + H E + +A L+R I+ Sbjct: 10 WKTKREALKKNNLRSVQPKDALRLQKEQGYTILDVRPENEFVQAHAEGAVNAQLYRLIKE 69
Query: 523 NDLKANMRRLGYAMMTDFAGTERNPLFIEQAVEAVGGDKTKKVVVMC 663 RR G+A FAGTE NP F+ + V+A+G DK K+++ C Sbjct: 70 WTPWDIARRAGFAFFGIFAGTEENPEFLNE-VKALGLDKDSKIIIGC 115
>tr|Q9T092|Q9T092_ARATH Putative uncharacterized protein AT4g27700 OS=Arabidopsis thaliana GN=AT4g27700 PE=2 SV=1 Length = 237
Score = 65.9 bits (159), Expect = 2e-09 Identities = 42/108 (38%), Positives = 59/108 (54%) Frame = +1
Query: 343 WIEIHRKLTERNLESIPCKEAFELGQSNQVVLLDVREPDEYEKVHVENSKSAPLFRQIQG 522 W + L E+ + S+ KEA L + N V+LDVR EY+ H + + ++R I+ Sbjct: 75 WRQKRELLLEKRVRSVDVKEAQRLQKENNFVILDVRPEAEYKAGHPPGAINVEMYRLIRE 134
Query: 523 NDLKANMRRLGYAMMTDFAGTERNPLFIEQAVEAVGGDKTKKVVVMCS 666 RRLG+A F+GTE NP FI Q+VEA DK K++V CS Sbjct: 135 WTAWDIARRLGFAFFGIFSGTEENPEFI-QSVEA-KLDKEAKIIVACS 180
>tr|Q94A65|Q94A65_ARATH AT4g27700/T29A15_190 OS=Arabidopsis thaliana GN=At4g27700 PE=2 SV=1 Length = 224
Score = 65.9 bits (159), Expect = 2e-09 Identities = 42/108 (38%), Positives = 59/108 (54%) Frame = +1
Query: 343 WIEIHRKLTERNLESIPCKEAFELGQSNQVVLLDVREPDEYEKVHVENSKSAPLFRQIQG 522 W + L E+ + S+ KEA L + N V+LDVR EY+ H + + ++R I+ Sbjct: 62 WRQKRELLLEKRVRSVDVKEAQRLQKENNFVILDVRPEAEYKAGHPPGAINVEMYRLIRE 121
Query: 523 NDLKANMRRLGYAMMTDFAGTERNPLFIEQAVEAVGGDKTKKVVVMCS 666 RRLG+A F+GTE NP FI Q+VEA DK K++V CS Sbjct: 122 WTAWDIARRLGFAFFGIFSGTEENPEFI-QSVEA-KLDKEAKIIVACS 167
>tr|Q8LEU5|Q8LEU5_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 224
Score = 65.9 bits (159), Expect = 2e-09 Identities = 42/108 (38%), Positives = 59/108 (54%) Frame = +1
Query: 343 WIEIHRKLTERNLESIPCKEAFELGQSNQVVLLDVREPDEYEKVHVENSKSAPLFRQIQG 522 W + L E+ + S+ KEA L + N V+LDVR EY+ H + + ++R I+ Sbjct: 62 WRQKRELLLEKRVRSVDVKEAQRLQKENNFVILDVRPEAEYKAGHPPGAINVEMYRLIRE 121
Query: 523 NDLKANMRRLGYAMMTDFAGTERNPLFIEQAVEAVGGDKTKKVVVMCS 666 RRLG+A F+GTE NP FI Q+VEA DK K++V CS Sbjct: 122 WTAWDIARRLGFAFFGIFSGTEENPEFI-QSVEA-KLDKEAKIIVACS 167
>tr|A7QEY9|A7QEY9_VITVI Chromosome chr16 scaffold_86, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037209001 PE=4 SV=1 Length = 233
Score = 63.9 bits (154), Expect = 9e-09 Identities = 35/101 (34%), Positives = 54/101 (53%) Frame = +1
Query: 364 LTERNLESIPCKEAFELGQSNQVVLLDVREPDEYEKVHVENSKSAPLFRQIQGNDLKANM 543 L E+ + S+ KEA L Q N V+LDVR E+++ H + + ++R I+ Sbjct: 80 LLEKKVRSVDAKEALRLQQENNFVILDVRPEAEFKEAHPPGAINVQIYRLIKEWTAWDIA 139
Query: 544 RRLGYAMMTDFAGTERNPLFIEQAVEAVGGDKTKKVVVMCS 666 RR +A FAGTE NP F++ + DK+ K++V CS Sbjct: 140 RRAAFAFFGIFAGTEENPEFMQSVESKI--DKSAKIIVACS 178
>tr|B6SR15|B6SR15_MAIZE Rhodanese-like domain containing protein OS=Zea mays PE=2 SV=1 Length = 229
Score = 63.5 bits (153), Expect = 1e-08 Identities = 37/108 (34%), Positives = 56/108 (51%) Frame = +1
Query: 343 WIEIHRKLTERNLESIPCKEAFELGQSNQVVLLDVREPDEYEKVHVENSKSAPLFRQIQG 522 W + L+E+ + S+ KEA L + N V+LDVR E+++ H + + ++R I+ Sbjct: 68 WKVKRQLLSEKRVRSVDVKEALRLQKENNFVILDVRPEAEFKEAHPPGAINVQIYRLIKE 127
Query: 523 NDLKANMRRLGYAMMTDFAGTERNPLFIEQAVEAVGGDKTKKVVVMCS 666 RR +A FAGTE NP FI+ VG K K++V CS Sbjct: 128 WTAWDIARRAAFAFFGIFAGTEENPEFIQSVDTKVG--KDAKIIVACS 173
|