DK959619 |
Clone id |
TST39A01NGRL0005_D04 |
Library |
TST39 |
Length |
614 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_D04. 5' end sequence. |
Accession |
DK959619 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3294Contig1 |
Sequence |
ACTTACTGGGGGCCTTCGTGCCGATGGCAAGGCTTGGGTGATCTAGCAGAGCTCGAAAAG AGCTATGTTTCGGTTGCGAAGGTTTGCAGGACTACAAGAGAGAGTATCATGTATCAAACA GATTCTGGGGAAGGAGGTGCCTTTTGATCTGCATTATGGAAGAAGCTTTTCGGAAGCTTT GGCTGTCTTGGAACCTGATGTTGAGCCCAATTTAAACCTTCCCGCGCCTGATCCTGAGCT TGCAGAGGTCATAGTGGCCGTGCCCAGAGCAGGAGGGGGGAAAATCATATCAAAGAAAGA GAGGAAAGCAGGCCGTGTCCCCGGGATCGTCCATAGCTTGGAGGATGGTCAGAATGGTGG GCACAAACAGCTCATTTCTGTGGAAACCAAGCAGCTTTCCAGGCTTCTCAAGCGAATAGG TTACAGCTTCTTCCACTCTCGGACATTTGAGCTCGAGGTGCGTGAGGAGATGAACTCTGA TGTTATCATCTCTAGAGAAAGGGTTTTACCTCGCTGGGTTCATTTGCATGCAGGTACAGA TGCCATTCTAAATGCCACTTTTATCAGGGCTCCACCTGAAGCAAAGATCCGAGTCAATGT TCCTCTTGTTTTCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q1H3J2 |
Definition |
sp|Q1H3J2|RL25_METFK 50S ribosomal protein L25 OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) |
Align length |
125 |
Score (bit) |
52.0 |
E-value |
2.0e-06 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9SUR4 |
Definition |
tr|Q9SUR4|Q9SUR4_ARATH Putative uncharacterized protein F9D16.90 (Putative uncharacterized protein At4g23620) (Putative uncharacterized protein) OS=Arabidopsis thaliana |
Align length |
131 |
Score (bit) |
166.0 |
E-value |
1.0e-39 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959619|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0005_D04, 5' (614 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9SUR4|Q9SUR4_ARATH Putative uncharacterized protein F9D16.90... 166 1e-39 tr|B2WS92|B2WS92_9BRAS 50S ribosomal protein OS=Capsella rubella... 166 1e-39 tr|A7QNG3|A7QNG3_VITVI Chromosome chr2 scaffold_132, whole genom... 161 3e-38 tr|A9T7H9|A9T7H9_PHYPA Predicted protein (Fragment) OS=Physcomit... 154 5e-36 tr|A5A5A1|A5A5A1_NICBE Ribosomal protein L25 OS=Nicotiana bentha... 149 1e-34 tr|Q5W6B7|Q5W6B7_ORYSJ Os05g0270000 protein OS=Oryza sativa subs... 139 2e-31 tr|A2Y2K9|A2Y2K9_ORYSI Putative uncharacterized protein OS=Oryza... 139 2e-31 tr|Q5ZC40|Q5ZC40_ORYSJ Putative uncharacterized protein P0451D05... 137 5e-31 tr|Q2HVB5|Q2HVB5_MEDTR Putative uncharacterized protein OS=Medic... 137 5e-31 tr|Q0JLK3|Q0JLK3_ORYSJ Os01g0593500 protein (Putative uncharacte... 137 5e-31 tr|A2WS29|A2WS29_ORYSI Putative uncharacterized protein OS=Oryza... 137 5e-31 tr|B4FYM2|B4FYM2_MAIZE Putative uncharacterized protein OS=Zea m... 135 2e-30 tr|A9P0B6|A9P0B6_PICSI Putative uncharacterized protein OS=Picea... 110 5e-23 tr|A7PV38|A7PV38_VITVI Chromosome chr4 scaffold_32, whole genome... 92 2e-17 tr|Q9FKZ4|Q9FKZ4_ARATH Arabidopsis thaliana genomic DNA, chromos... 82 2e-14 tr|A7QYE6|A7QYE6_VITVI Chromosome undetermined scaffold_245, who... 74 7e-12 tr|Q10GV3|Q10GV3_ORYSJ Ribosomal 5S rRNA E-loop binding protein ... 67 1e-09 tr|Q10GV2|Q10GV2_ORYSJ Ribosomal 5S rRNA E-loop binding protein ... 67 1e-09 tr|Q0DQB7|Q0DQB7_ORYSJ Os03g0612600 protein (Fragment) OS=Oryza ... 67 1e-09 tr|B8AMM7|B8AMM7_ORYSI Putative uncharacterized protein OS=Oryza... 67 1e-09 tr|B6TN36|B6TN36_MAIZE 5S rRNA binding protein OS=Zea mays PE=2 ... 64 9e-09 tr|Q00YQ0|Q00YQ0_OSTTA Putative uncharacterized protein (Fragmen... 59 3e-07 tr|Q1N8I4|Q1N8I4_9SPHN Ribosomal 5S rRNA E-loop binding protein ... 54 9e-06 tr|B8EK41|B8EK41_METSI Ribosomal 5S rRNA E-loop binding protein ... 51 5e-05 tr|A4S4Y1|A4S4Y1_OSTLU Predicted protein OS=Ostreococcus lucimar... 51 6e-05 tr|B2IG64|B2IG64_BEII9 Ribosomal 5S rRNA E-loop binding protein ... 49 3e-04 tr|A3WCE8|A3WCE8_9SPHN Ribosomal protein L25 OS=Erythrobacter sp... 49 3e-04 tr|B3Q7X4|B3Q7X4_RHOPT Ribosomal 5S rRNA E-loop binding protein ... 48 4e-04 tr|Q0FFC1|Q0FFC1_9RHOB Ribosomal protein L25 OS=Rhodobacterales ... 48 5e-04 tr|A3WY33|A3WY33_9BRAD Ribosomal protein L25 OS=Nitrobacter sp. ... 46 0.002
>tr|Q9SUR4|Q9SUR4_ARATH Putative uncharacterized protein F9D16.90 (Putative uncharacterized protein At4g23620) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=AT4g23620 PE=2 SV=1 Length = 264
Score = 166 bits (420), Expect = 1e-39 Identities = 80/131 (61%), Positives = 103/131 (78%) Frame = +2
Query: 221 PAPDPELAEVIVAVPRAGGGKIISKKERKAGRVPGIVHSLEDGQNGGHKQLISVETKQLS 400 P PDP+ AE I+AVPR+ GK IS KERKAGRVP I+ EDGQ+GG+K+LISV+T Q+ Sbjct: 44 PRPDPKHAETILAVPRSVSGKSISAKERKAGRVPSIIFEQEDGQHGGNKRLISVQTNQIR 103
Query: 401 RLLKRIGYSFFHSRTFELEVREEMNSDVIISRERVLPRWVHLHAGTDAILNATFIRAPPE 580 +L+ +GYSFF SR F++EVR E+ SD +I + R LPR +HLH+GTDA LN TFIRAPP Sbjct: 104 KLVNHLGYSFFLSRLFDVEVRAEIGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAPPG 163
Query: 581 AKIRVNVPLVF 613 A ++V++PLVF Sbjct: 164 ALLKVDIPLVF 174
>tr|B2WS92|B2WS92_9BRAS 50S ribosomal protein OS=Capsella rubella GN=6J23.13 PE=4 SV=1 Length = 257
Score = 166 bits (420), Expect = 1e-39 Identities = 79/131 (60%), Positives = 103/131 (78%) Frame = +2
Query: 221 PAPDPELAEVIVAVPRAGGGKIISKKERKAGRVPGIVHSLEDGQNGGHKQLISVETKQLS 400 P PDP+ AE I+AVPR+ GK IS KERKAGRVP I+ EDGQ+GG+K+L+SV+T Q+ Sbjct: 44 PRPDPKYAETILAVPRSVSGKSISAKERKAGRVPSIIFEQEDGQHGGNKRLVSVQTNQIR 103
Query: 401 RLLKRIGYSFFHSRTFELEVREEMNSDVIISRERVLPRWVHLHAGTDAILNATFIRAPPE 580 +L+ +GYSFF SR F++EVR E+ SD +I + R LPR +HLH+GTDA LN TFIRAPP Sbjct: 104 KLVTHLGYSFFLSRLFDVEVRAEIGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAPPG 163
Query: 581 AKIRVNVPLVF 613 A ++V++PLVF Sbjct: 164 ALLKVDIPLVF 174
>tr|A7QNG3|A7QNG3_VITVI Chromosome chr2 scaffold_132, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002517001 PE=4 SV=1 Length = 258
Score = 161 bits (407), Expect = 3e-38 Identities = 86/155 (55%), Positives = 108/155 (69%), Gaps = 5/155 (3%) Frame = +2
Query: 164 SFSEALAVLEPDVEPNL-----NLPAPDPELAEVIVAVPRAGGGKIISKKERKAGRVPGI 328 S S A AVL+ +EP P PDP+ AE+I A+PR GK IS KERK GRVP I Sbjct: 20 SQSAAAAVLQDPLEPPPLTYLEGFPRPDPKFAEIIRAIPRTISGKNISAKERKVGRVPSI 79
Query: 329 VHSLEDGQNGGHKQLISVETKQLSRLLKRIGYSFFHSRTFELEVREEMNSDVIISRERVL 508 V EDGQ+GG+K+LISV+T Q+ +L+ +G SFF SR F+LEV S+ +I + RVL Sbjct: 80 VFEQEDGQHGGNKRLISVKTNQIRKLVNHLGRSFFLSRLFDLEVGPHFESNEVIEKVRVL 139
Query: 509 PRWVHLHAGTDAILNATFIRAPPEAKIRVNVPLVF 613 PR +HLHAGTDA+LN TFIRAP A ++V+VPLVF Sbjct: 140 PRKLHLHAGTDAVLNVTFIRAPSHALLKVDVPLVF 174
>tr|A9T7H9|A9T7H9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_47148 PE=4 SV=1 Length = 206
Score = 154 bits (388), Expect = 5e-36 Identities = 76/131 (58%), Positives = 100/131 (76%) Frame = +2
Query: 221 PAPDPELAEVIVAVPRAGGGKIISKKERKAGRVPGIVHSLEDGQNGGHKQLISVETKQLS 400 P + + EVI+ PR G GKI+SKKER+ GRVP IV S E+G GG+KQLISVETKQ+ Sbjct: 1 PKEEEKAEEVILGFPRHGSGKIVSKKERRVGRVPSIVFSQENGHIGGNKQLISVETKQIE 60
Query: 401 RLLKRIGYSFFHSRTFELEVREEMNSDVIISRERVLPRWVHLHAGTDAILNATFIRAPPE 580 RL+KR+G S F S TF+LEV ++ + + ++ERVLPR +HLHAGTD ++N TFIRAPP Sbjct: 61 RLIKRLGKSSFLSSTFDLEVYDDQGN--VQAKERVLPRSIHLHAGTDKVMNVTFIRAPPT 118
Query: 581 AKIRVNVPLVF 613 A ++V+VPL+F Sbjct: 119 ASLKVDVPLIF 129
>tr|A5A5A1|A5A5A1_NICBE Ribosomal protein L25 OS=Nicotiana benthamiana PE=2 SV=1 Length = 251
Score = 149 bits (377), Expect = 1e-34 Identities = 82/156 (52%), Positives = 106/156 (67%), Gaps = 2/156 (1%) Frame = +2
Query: 152 HYGRSF--SEALAVLEPDVEPNLNLPAPDPELAEVIVAVPRAGGGKIISKKERKAGRVPG 325 HY F + A AV+ P EP P PDP+ E I A+ RA GK I+ KERKAGRVP Sbjct: 14 HYHLRFFSNSAAAVVLPYPEPEF--PKPDPKYDETIHAIARAKSGKNIAAKERKAGRVPS 71
Query: 326 IVHSLEDGQNGGHKQLISVETKQLSRLLKRIGYSFFHSRTFELEVREEMNSDVIISRERV 505 IV EDGQ+GG+K+LISV+ Q+ +L+ +G S F SR F+LEVR + +S ++ + RV Sbjct: 72 IVFEQEDGQHGGNKRLISVQANQIRKLVNHLGRSHFLSRLFDLEVRPDFDSVEVVEKVRV 131
Query: 506 LPRWVHLHAGTDAILNATFIRAPPEAKIRVNVPLVF 613 LPR VHL AG+DA LN TFIRAP A ++V+VPL+F Sbjct: 132 LPRKVHLEAGSDAPLNVTFIRAPSSALLKVDVPLIF 167
>tr|Q5W6B7|Q5W6B7_ORYSJ Os05g0270000 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0037H03.14 PE=2 SV=1 Length = 265
Score = 139 bits (349), Expect = 2e-31 Identities = 71/132 (53%), Positives = 95/132 (71%), Gaps = 1/132 (0%) Frame = +2
Query: 221 PAPDPELAEVIVAVPRAGGGKIISKKERKAGRVPGIVHSLEDGQNGGHKQLISVETKQLS 400 P PD + E+I+AVPRA G+ ++ KERKAGRVP IV E+GQ GG+K+L+SV++KQ+ Sbjct: 50 PRPDAKHDELILAVPRASPGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLVSVQSKQIR 109
Query: 401 RLLKRIGYSFFHSRTFELEV-REEMNSDVIISRERVLPRWVHLHAGTDAILNATFIRAPP 577 +L+ +G SFF SR F L+V E V+I RVLPR VHLHAGTD LN TF+RAP Sbjct: 110 KLVDHLGRSFFLSRLFRLQVWSEHAGQGVLIESVRVLPRKVHLHAGTDEPLNVTFMRAPS 169
Query: 578 EAKIRVNVPLVF 613 A ++++VPL+F Sbjct: 170 SALLKIDVPLMF 181
>tr|A2Y2K9|A2Y2K9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19240 PE=4 SV=1 Length = 265
Score = 139 bits (349), Expect = 2e-31 Identities = 71/132 (53%), Positives = 95/132 (71%), Gaps = 1/132 (0%) Frame = +2
Query: 221 PAPDPELAEVIVAVPRAGGGKIISKKERKAGRVPGIVHSLEDGQNGGHKQLISVETKQLS 400 P PD + E+I+AVPRA G+ ++ KERKAGRVP IV E+GQ GG+K+L+SV++KQ+ Sbjct: 50 PRPDAKHDELILAVPRASPGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLVSVQSKQIR 109
Query: 401 RLLKRIGYSFFHSRTFELEV-REEMNSDVIISRERVLPRWVHLHAGTDAILNATFIRAPP 577 +L+ +G SFF SR F L+V E V+I RVLPR VHLHAGTD LN TF+RAP Sbjct: 110 KLVDHLGRSFFLSRLFRLQVWSEHAGQGVLIESVRVLPRKVHLHAGTDEPLNVTFMRAPS 169
Query: 578 EAKIRVNVPLVF 613 A ++++VPL+F Sbjct: 170 SALLKIDVPLMF 181
>tr|Q5ZC40|Q5ZC40_ORYSJ Putative uncharacterized protein P0451D05.4 OS=Oryza sativa subsp. japonica GN=P0451D05.4 PE=4 SV=1 Length = 381
Score = 137 bits (345), Expect = 5e-31 Identities = 70/132 (53%), Positives = 94/132 (71%), Gaps = 1/132 (0%) Frame = +2
Query: 221 PAPDPELAEVIVAVPRAGGGKIISKKERKAGRVPGIVHSLEDGQNGGHKQLISVETKQLS 400 P PD + E+I+AVPRA G+ ++ KERKAGRVP IV E+GQ GG+K+L+SV++KQ+ Sbjct: 56 PRPDAKHDELILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLVSVQSKQIR 115
Query: 401 RLLKRIGYSFFHSRTFELEV-REEMNSDVIISRERVLPRWVHLHAGTDAILNATFIRAPP 577 +L+ +G SFF SR F L+V E +I RVLPR VHLHAGTD LN TF+RAP Sbjct: 116 KLVDHLGRSFFLSRLFRLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNVTFMRAPS 175
Query: 578 EAKIRVNVPLVF 613 A ++++VPL+F Sbjct: 176 SALLKIDVPLMF 187
>tr|Q2HVB5|Q2HVB5_MEDTR Putative uncharacterized protein OS=Medicago truncatula GN=MtrDRAFT_AC148965g15v2 PE=2 SV=1 Length = 266
Score = 137 bits (345), Expect = 5e-31 Identities = 79/165 (47%), Positives = 104/165 (63%), Gaps = 11/165 (6%) Frame = +2
Query: 152 HYGRSFSEALAVLEPD--VEPNLNL---PAPDPELAEVIVAVPRAGGGKIISKKERKAGR 316 H+ + + EPD ++P L P P+P+ E I+A+PR GK IS KERK GR Sbjct: 16 HFSAIATALIHTPEPDHILQPLTYLDGFPKPNPKYDETILAIPRKDSGKNISAKERKVGR 75
Query: 317 VPGIVHSLEDGQNGGHKQLISVETKQLSRLLKRIGYSFFHSRTFELEVREEMNSDV---- 484 VP IV EDG GG+K+LISV + Q+ +L+ +G SFF SR F L+V + +SD Sbjct: 76 VPSIVFEQEDGHLGGNKRLISVRSDQIRKLVNHLGRSFFLSRLFHLQVLHQFDSDSNPND 135
Query: 485 --IISRERVLPRWVHLHAGTDAILNATFIRAPPEAKIRVNVPLVF 613 II RVLPR +HL AGTDA LN TFIRAP +A ++V+VP+VF Sbjct: 136 EDIIENVRVLPRSIHLKAGTDAPLNVTFIRAPSDAWLKVDVPIVF 180
>tr|Q0JLK3|Q0JLK3_ORYSJ Os01g0593500 protein (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=Os01g0593500 PE=4 SV=1 Length = 271
Score = 137 bits (345), Expect = 5e-31 Identities = 70/132 (53%), Positives = 94/132 (71%), Gaps = 1/132 (0%) Frame = +2
Query: 221 PAPDPELAEVIVAVPRAGGGKIISKKERKAGRVPGIVHSLEDGQNGGHKQLISVETKQLS 400 P PD + E+I+AVPRA G+ ++ KERKAGRVP IV E+GQ GG+K+L+SV++KQ+ Sbjct: 56 PRPDAKHDELILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLVSVQSKQIR 115
Query: 401 RLLKRIGYSFFHSRTFELEV-REEMNSDVIISRERVLPRWVHLHAGTDAILNATFIRAPP 577 +L+ +G SFF SR F L+V E +I RVLPR VHLHAGTD LN TF+RAP Sbjct: 116 KLVDHLGRSFFLSRLFRLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNVTFMRAPS 175
Query: 578 EAKIRVNVPLVF 613 A ++++VPL+F Sbjct: 176 SALLKIDVPLMF 187
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