DK959573
Clone id TST39A01NGRL0005_B02
Library
Length 733
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_B02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
CACACACACACACGATCAGGTCATGAGCAGCGAAGAAGGAGCAGCCAACTGGAGGGATGC
GCAATCCATCTGCTTCAGCATTCCCTTGATACCTGCGGCCCTGCAGCAGCTGCGCTTCCT
GTCGCAGGTCGATCTCCACCGCTGCCTCTATCGAGGCCCTGCAGTCTCACGCGCCATCCA
ACGGTATGAGGAGTGTTGGCTCCCCTTGCTGGCAGCAAGCCAAGGTTCGACTGGTGATGA
GGGCTTGCCTCTCCAGCCTCCTCTGGATTGCGCTTGGATCTGGCATTGCCACCGCCTTAG
CCCGGCTCTATCATCTTTGAGGATATGTGTGCTTCAACATCACGAAAAAGGTTGCCTTAC
CAGTATTGGTGGAAAGCTTCACCAAAGAGAGGGGCGCCAAGCTCACTTGGGGGAAATTGG
ATAAAAGAGAACAGTACAAGTACCATGTTTAGAGGAAAAATTGAATTGAAGAGTCAAGCA
AAGATTGCATATCAAGTGGTTGTGCCACTCGGGTTACTTTTTCAAGAGATGTTAGAAGAA
ACAAATCCATTTGGAAAATGGAGTTTACCAAAGGTTTCTACTTCTCAAGTGTACAAACAT
AACAAAGTATTTGCCCTCTCTTCTAATACACTGTATCATGAAACCCATGGAAAGTTAACA
ATTAGGGATAGTGATCCCAATAATCACATTAATCCACTTCTTTTAAGAAAAAAAAAAAAA
AAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9N1X4
Definition sp|Q9N1X4|SFTPD_PIG Pulmonary surfactant-associated protein D OS=Sus scrofa
Align length 66
Score (bit) 33.5
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959573|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_B02, 5'
(704 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9N1X4|SFTPD_PIG Pulmonary surfactant-associated protein D OS... 33 1.1
sp|Q9Y5J3|HEY1_HUMAN Hairy/enhancer-of-split related with YRPW m... 29 2.3
sp|Q9X079|Y984_THEMA UPF0192 protein TM_0984 OS=Thermotoga marit... 31 5.7
sp|Q55FQ9|LMPC_DICDI Lysosome membrane protein 2-C OS=Dictyostel... 31 5.7
sp|Q89QJ5|GLNE_BRAJA Glutamate-ammonia-ligase adenylyltransferas... 31 7.4
sp|Q9WV93|HEY1_MOUSE Hairy/enhancer-of-split related with YRPW m... 27 8.1
sp|Q8NDB6|FA156_HUMAN Protein FAM156A OS=Homo sapiens GN=FAM156A... 30 9.7

>sp|Q9N1X4|SFTPD_PIG Pulmonary surfactant-associated protein D
OS=Sus scrofa GN=SFTPD PE=2 SV=1
Length = 378

Score = 33.5 bits (75), Expect = 1.1
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -1

Query: 290 GNARSKRNPEEAGEASPHHQSN-LGLLPARGANTPHTVGWRVRLQGLDRGSGGDRPATGS 114
GN P GE P + LG+ + GA P L+G +RG+ G+R A GS
Sbjct: 127 GNIGPPGTPGPKGETGPKGEVGALGMQGSTGARGP------AGLKG-ERGAPGERGAPGS 179

Query: 113 AAAAGP 96
A AAGP
Sbjct: 180 AGAAGP 185


>sp|Q9Y5J3|HEY1_HUMAN Hairy/enhancer-of-split related with YRPW
motif protein 1 OS=Homo sapiens GN=HEY1 PE=1 SV=1
Length = 304

Score = 29.3 bits (64), Expect(2) = 2.3
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1

Query: 329 HISSKMIEPG*GGGNARSKRNPEEAGEASPHHQSNLG 219
HI+ ++ P G GNA + +P E PHHQ LG
Sbjct: 189 HIAHPLLLPQNGHGNAGTTASPTE-----PHHQGRLG 220



Score = 21.9 bits (45), Expect(2) = 2.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2

Query: 103 QGRRYQGNAEADGLRIPPVG 44
QGR + EA LR PP G
Sbjct: 216 QGRLGSAHPEAPALRAPPSG 235


>sp|Q9X079|Y984_THEMA UPF0192 protein TM_0984 OS=Thermotoga maritima
GN=TM_0984 PE=3 SV=1
Length = 1536

Score = 31.2 bits (69), Expect = 5.7
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1

Query: 352 LPYQYWWKASPKRGAPSSLGGNWIK-ENSTSTMFR 453
LPY+YW K RG P + G +K + T T FR
Sbjct: 1236 LPYKYWKKTIEYRGVPLEINGAEVKIKGETYTFFR 1270


>sp|Q55FQ9|LMPC_DICDI Lysosome membrane protein 2-C OS=Dictyostelium
discoideum GN=lmpC PE=1 SV=1
Length = 782

Score = 31.2 bits (69), Expect = 5.7
Identities = 23/81 (28%), Positives = 33/81 (40%)
Frame = +1

Query: 430 NSTSTMFRGKIELKSQAKIAYQVVVPLGLLFQEMLEETNPFGKWSLPKVSTSQVYKHNKV 609
NST G L I+Y + P G+ Q LE NP ++SL + Y N V
Sbjct: 234 NSTIIPTNGNSSLWDNMLISYGLDSPSGISLQSALEILNPMNQYSLLNSTNGISYWINAV 293

Query: 610 FALSSNTLYHETHGKLTIRDS 672
F ++ Y +L I +
Sbjct: 294 FNGPNSNSYQILEQELGINQA 314


>sp|Q89QJ5|GLNE_BRAJA Glutamate-ammonia-ligase adenylyltransferase
OS=Bradyrhizobium japonicum GN=glnE PE=3 SV=1
Length = 995

Score = 30.8 bits (68), Expect = 7.4
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = -2

Query: 307 SRAKAVAMPDPSAIQRRLERQALITSRTLACCQQGE--PTLLIPLDGA*DCRASIEAAVE 134
+R +A PD + + R L R + A C G P + + +S++AA++
Sbjct: 104 ARGAVLAAPDEAEVMRLLRRMKAEAALLTALCDIGGVWPVMRVTSALTDVAVSSVQAALQ 163

Query: 133 IDLRQEAQLLQGRRYQGNAEADGLRIPPVGC 41
LRQEA +G+ + N EA P GC
Sbjct: 164 YLLRQEA--ARGKLFPPNPEA-----PEEGC 187


>sp|Q9WV93|HEY1_MOUSE Hairy/enhancer-of-split related with YRPW
motif protein 1 OS=Mus musculus GN=Hey1 PE=1 SV=1
Length = 299

Score = 26.9 bits (58), Expect(2) = 8.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1

Query: 329 HISSKMIEPG*GGGNARSKRNPEEAGEASPHHQSNL 222
HI+ ++ P G GNA + +P E PHHQ L
Sbjct: 189 HIAHPLLLPQNGHGNAGTAASPTE-----PHHQGRL 219



Score = 22.3 bits (46), Expect(2) = 8.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2

Query: 103 QGRRYQGNAEADGLRIPPVG 44
QGR + EA LR PP G
Sbjct: 216 QGRLASAHPEAPALRAPPSG 235


>sp|Q8NDB6|FA156_HUMAN Protein FAM156A OS=Homo sapiens GN=FAM156A
PE=2 SV=1
Length = 213

Score = 30.4 bits (67), Expect = 9.7
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = -1

Query: 236 HQSNLGLLPARGANTPHTVGWRVRLQGLD---RGSGGDRPATGSAAAAGPQVSRE 81
H+ NL +P PH W +QGL G ++P AA PQ + E
Sbjct: 134 HRPNLSGIPGESNRAPHPSSWETLVQGLSGLTLSLGTNQPGPLPEAALQPQETEE 188


tr_hit_id A9RTE2
Definition tr|A9RTE2|A9RTE2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 85
Score (bit) 105.0
E-value 4.0e-21
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959573|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_B02, 5'
(704 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9RTE2|A9RTE2_PHYPA Predicted protein OS=Physcomitrella paten... 105 4e-21
tr|B8LME0|B8LME0_PICSI Putative uncharacterized protein OS=Picea... 104 6e-21
tr|Q9SZJ2|Q9SZJ2_ARATH Putative uncharacterized protein F20D10.2... 102 2e-20
tr|A9YWR4|A9YWR4_MEDTR Glycine-rich protein OS=Medicago truncatu... 102 2e-20
tr|A7R8I8|A7R8I8_VITVI Chromosome undetermined scaffold_2601, wh... 101 4e-20
tr|A7R437|A7R437_VITVI Chromosome undetermined scaffold_611, who... 101 4e-20
tr|A7R203|A7R203_VITVI Chromosome undetermined scaffold_388, who... 101 4e-20
tr|B8BLM2|B8BLM2_ORYSI Putative uncharacterized protein OS=Oryza... 100 9e-20
tr|A2ZGG0|A2ZGG0_ORYSI Putative uncharacterized protein OS=Oryza... 100 9e-20
tr|Q9ZQ47|Q9ZQ47_ARATH Putative uncharacterized protein At2g2266... 99 2e-19
tr|Q2V469|Q2V469_ARATH Uncharacterized protein At2g22660.1 OS=Ar... 99 2e-19
tr|Q9XEU3|Q9XEU3_ORYSA Putative uncharacterized protein OS=Oryza... 99 3e-19
tr|Q7XZU9|Q7XZU9_HORVU PG1 OS=Hordeum vulgare GN=pg1 PE=4 SV=1 99 3e-19
tr|Q5EXM2|Q5EXM2_HORVU Pg1 OS=Hordeum vulgare GN=pg1 PE=4 SV=1 99 3e-19
tr|Q2R124|Q2R124_ORYSJ Os11g0621300 protein OS=Oryza sativa subs... 99 3e-19
tr|Q9XEP3|Q9XEP3_SORBI Putative uncharacterized protein OS=Sorgh... 92 4e-17
tr|A9T666|A9T666_PHYPA Predicted protein OS=Physcomitrella paten... 84 9e-15
tr|A9SU36|A9SU36_PHYPA Predicted protein OS=Physcomitrella paten... 79 3e-13
tr|A9T0F4|A9T0F4_PHYPA Predicted protein OS=Physcomitrella paten... 75 3e-12
tr|A9TTG1|A9TTG1_PHYPA Predicted protein OS=Physcomitrella paten... 74 7e-12
tr|A9S5Y2|A9S5Y2_PHYPA Predicted protein OS=Physcomitrella paten... 68 5e-10
tr|B6PB78|B6PB78_BRAFL Putative uncharacterized protein OS=Branc... 65 6e-09
tr|A8QC01|A8QC01_BRUMA Putative uncharacterized protein OS=Brugi... 62 3e-08
tr|A9U387|A9U387_PHYPA Predicted protein OS=Physcomitrella paten... 62 4e-08
tr|A7RQB8|A7RQB8_NEMVE Predicted protein OS=Nematostella vectens... 60 2e-07
tr|A7PRZ1|A7PRZ1_VITVI Chromosome chr14 scaffold_27, whole genom... 59 2e-07
tr|O01849|O01849_CAEEL Putative uncharacterized protein OS=Caeno... 59 3e-07
tr|A8WW82|A8WW82_CAEBR Putative uncharacterized protein OS=Caeno... 59 3e-07
tr|A5BIA5|A5BIA5_VITVI Putative uncharacterized protein OS=Vitis... 57 9e-07
tr|Q9C7J8|Q9C7J8_ARATH Putative uncharacterized protein F14G9.16... 55 6e-06

>tr|A9RTE2|A9RTE2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_160875 PE=4 SV=1
Length = 771

Score = 105 bits (261), Expect = 4e-21
Identities = 46/85 (54%), Positives = 56/85 (65%)
Frame = +2

Query: 50 WRDAQSICFSIPLIPAALQQLRFLSQVDLHRCLYRGPAVSRAIQRYEECWLPLLAASQGS 229
W AQ++ S+ L+ AA ++LR L +VD +C Y GPAV RAI RYE CWLPLLA
Sbjct: 9 WEAAQALPISVDLVAAATEELRMLEEVDRFQCYYEGPAVVRAIDRYERCWLPLLAKEGDD 68

Query: 230 TGDEGLPLQPPLDCAWIWHCHRLSP 304
+ PL PPLDC WIWH HRL+P
Sbjct: 69 SQGASPPLVPPLDCGWIWHVHRLNP 93


>tr|B8LME0|B8LME0_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 815

Score = 104 bits (259), Expect = 6e-21
Identities = 51/87 (58%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Frame = +2

Query: 50 WRDAQSICFSIPL--IPAALQQLRFLSQVDLHRCLYRGPAVSRAIQRYEECWLPLLAASQ 223
WR AQ I S+ L I AA Q L FL+ VD +RCLY GPA+ RAI RYE+CWLPLL A
Sbjct: 9 WRKAQEISISVDLDLISAAKQHLLFLASVDRYRCLYDGPALQRAIYRYEQCWLPLL-AEH 67

Query: 224 GSTGDEGLPLQPPLDCAWIWHCHRLSP 304
+G+ L PLDC WIWHCHRL+P
Sbjct: 68 TESGNAKFQLVVPLDCEWIWHCHRLNP 94


>tr|Q9SZJ2|Q9SZJ2_ARATH Putative uncharacterized protein F20D10.20
(Putative uncharacterized protein AT4g37900)
OS=Arabidopsis thaliana GN=AT4g37900 PE=2 SV=1
Length = 787

Score = 102 bits (254), Expect = 2e-20
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +2

Query: 32 EEGAANWRDAQSICFSIPLIPAALQQLRFLSQVDLHRCLYRGPAVSRAIQRYEECWLPLL 211
+E W +AQ I S+ L+ AA + L FL VD +RCLY GPA+ RAI RY WLPLL
Sbjct: 5 KEQTLEWNEAQKIDISVDLLAAAKKHLLFLGAVDRNRCLYDGPALQRAIYRYNAYWLPLL 64

Query: 212 AASQGSTGDEGLPLQPPLDCAWIWHCHRLSP 304
A S+ PL PPLDC W+WHCHRL+P
Sbjct: 65 AQYTESSSICQGPLVPPLDCEWVWHCHRLNP 95


>tr|A9YWR4|A9YWR4_MEDTR Glycine-rich protein OS=Medicago truncatula
PE=4 SV=1
Length = 897

Score = 102 bits (254), Expect = 2e-20
Identities = 52/94 (55%), Positives = 63/94 (67%)
Frame = +2

Query: 23 MSSEEGAANWRDAQSICFSIPLIPAALQQLRFLSQVDLHRCLYRGPAVSRAIQRYEECWL 202
M +E+ A W +AQ I S+ L+ A +QL+FL+ VD +R LY GPA+ RAI RY CWL
Sbjct: 1 MEAEQEHA-WNEAQKIGMSVDLVDVAKKQLQFLAAVDRNRHLYDGPALDRAIYRYNACWL 59

Query: 203 PLLAASQGSTGDEGLPLQPPLDCAWIWHCHRLSP 304
PLLA S EG PL PLDC WIWHCHRL+P
Sbjct: 60 PLLAKHSESRIFEG-PLVVPLDCEWIWHCHRLNP 92


>tr|A7R8I8|A7R8I8_VITVI Chromosome undetermined scaffold_2601, whole
genome shotgun sequence (Fragment) OS=Vitis vinifera
GN=GSVIVT00011948001 PE=4 SV=1
Length = 515

Score = 101 bits (252), Expect = 4e-20
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +2

Query: 32 EEGAANWRDAQSICFSIPLIPAALQQLRFLSQVDLHRCLYRGPAVSRAIQRYEECWLPLL 211
+E W +AQ I S L+ A QL+FL+ VD HRCLY GP + +AI RY CWLPLL
Sbjct: 3 KEQELEWLEAQKIVISEDLVAVAKMQLQFLAVVDKHRCLYDGPTLQKAIYRYNACWLPLL 62

Query: 212 AASQGSTGDEGLPLQPPLDCAWIWHCHRLSP 304
A S +G PL P+DC WIWHCHRL+P
Sbjct: 63 AKHSESQIFKG-PLVVPVDCEWIWHCHRLNP 92


>tr|A7R437|A7R437_VITVI Chromosome undetermined scaffold_611, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00004142001 PE=4 SV=1
Length = 1690

Score = 101 bits (252), Expect = 4e-20
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +2

Query: 32 EEGAANWRDAQSICFSIPLIPAALQQLRFLSQVDLHRCLYRGPAVSRAIQRYEECWLPLL 211
+E W +AQ I S L+ A QL+FL+ VD HRCLY GP + +AI RY CWLPLL
Sbjct: 3 KEQQLEWLEAQKIVISEDLVAVAKMQLQFLAVVDKHRCLYDGPTLQKAIYRYNACWLPLL 62

Query: 212 AASQGSTGDEGLPLQPPLDCAWIWHCHRLSP 304
A S +G PL P+DC WIWHCHRL+P
Sbjct: 63 AKHSESQIFKG-PLVVPVDCEWIWHCHRLNP 92


>tr|A7R203|A7R203_VITVI Chromosome undetermined scaffold_388, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00012516001 PE=4 SV=1
Length = 825

Score = 101 bits (252), Expect = 4e-20
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +2

Query: 32 EEGAANWRDAQSICFSIPLIPAALQQLRFLSQVDLHRCLYRGPAVSRAIQRYEECWLPLL 211
+E W +AQ I S L+ A QL+FL+ VD HRCLY GP + +AI RY CWLPLL
Sbjct: 3 KEQQLEWLEAQKIVISEDLVAVAKMQLQFLAVVDKHRCLYDGPTLQKAIYRYNACWLPLL 62

Query: 212 AASQGSTGDEGLPLQPPLDCAWIWHCHRLSP 304
A S +G PL P+DC WIWHCHRL+P
Sbjct: 63 AKHSESQIFKG-PLVVPVDCEWIWHCHRLNP 92


>tr|B8BLM2|B8BLM2_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_36873 PE=4 SV=1
Length = 805

Score = 100 bits (249), Expect = 9e-20
Identities = 48/90 (53%), Positives = 57/90 (63%)
Frame = +2

Query: 35 EGAANWRDAQSICFSIPLIPAALQQLRFLSQVDLHRCLYRGPAVSRAIQRYEECWLPLLA 214
E A W AQ + L+ AAL+QL FL+ VD R LY GP + RAI RY+ CWLPLLA
Sbjct: 4 EQEARWLAAQGVAVGADLVAAALRQLEFLAAVDRRRWLYEGPLLERAIHRYKTCWLPLLA 63

Query: 215 ASQGSTGDEGLPLQPPLDCAWIWHCHRLSP 304
+ +G PL PLDC WIWHCHRL+P
Sbjct: 64 KHTQAAVVDG-PLVVPLDCEWIWHCHRLNP 92


>tr|A2ZGG0|A2ZGG0_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_36870 PE=4 SV=1
Length = 902

Score = 100 bits (249), Expect = 9e-20
Identities = 48/90 (53%), Positives = 57/90 (63%)
Frame = +2

Query: 35 EGAANWRDAQSICFSIPLIPAALQQLRFLSQVDLHRCLYRGPAVSRAIQRYEECWLPLLA 214
E A W AQ + L+ AAL+QL FL+ VD R LY GP + RAI RY+ CWLPLLA
Sbjct: 4 EQEARWLAAQGVAVGADLVAAALRQLEFLAAVDRRRWLYEGPLLERAIHRYKTCWLPLLA 63

Query: 215 ASQGSTGDEGLPLQPPLDCAWIWHCHRLSP 304
+ +G PL PLDC WIWHCHRL+P
Sbjct: 64 KHTQAAVVDG-PLVVPLDCEWIWHCHRLNP 92


>tr|Q9ZQ47|Q9ZQ47_ARATH Putative uncharacterized protein At2g22660
OS=Arabidopsis thaliana GN=At2g22660 PE=2 SV=1
Length = 819

Score = 99.4 bits (246), Expect = 2e-19
Identities = 49/86 (56%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +2

Query: 50 WRDAQSICFSIPLIPAALQQLRFLSQVDLHRCLYRGPAVSRAIQRYEECWLPLLAA-SQG 226
W +AQ I S+ L+ AA Q L FL VD +R LY GPA+ +AI RY CWLPLL S+
Sbjct: 11 WLEAQKIEISVDLLAAAKQHLLFLETVDRNRWLYDGPALEKAIYRYNACWLPLLVKYSES 70

Query: 227 STGDEGLPLQPPLDCAWIWHCHRLSP 304
S+ EG L PPLDC WIWHCHRL+P
Sbjct: 71 SSVSEG-SLVPPLDCEWIWHCHRLNP 95