DK959525
Clone id TST39A01NGRL0004_O22
Library
Length 269
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_O22. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
ATTTCAATCACCCAAATGAGGATAGACAGCTACTCCTTCCCCTATTCTATCATACCGAGC
TTCAGCGTTTCCCCGAGAGGAGAGCAGCTCTCAGGAAGCCCCATCGGTCGAACTTCATTC
TGCTCATCATTTTACCGTATCGGATGAACACTTACATAAGGTAGCAGATGGCGTCGCTGG
CAAGCATTGTCACGCAACCGCCCGATCGAGCACTGGATGCTATTTCGGGGCCGTTGGGGA
AGCGTAGGACTTATCACTATGACTTTCTC
■■Homology search results ■■ -
sp_hit_id P15320
Definition sp|P15320|HLYA_SERMA Hemolysin OS=Serratia marcescens
Align length 45
Score (bit) 29.6
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959525|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0004_O22, 5'
(269 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P15320|HLYA_SERMA Hemolysin OS=Serratia marcescens GN=shlA PE... 30 4.9
sp|Q5NRP9|EDN1_ATEAB Endothelin-1 OS=Atelerix albiventris GN=EDN... 29 6.4
sp|P50773|VE2_HPV70 Regulatory protein E2 OS=Human papillomaviru... 29 8.4
sp|Q8J257|PACC_PARBR pH-response transcription factor pacC/RIM10... 29 8.4
sp|Q9BG76|EDN1_SHEEP Endothelin-1 OS=Ovis aries GN=EDN1 PE=2 SV=1 29 8.4
sp|Q96M20|CT152_HUMAN Uncharacterized protein C20orf152 OS=Homo ... 29 8.4
sp|Q39247|2ABB_ARATH Serine/threonine protein phosphatase 2A 55 ... 29 8.4

>sp|P15320|HLYA_SERMA Hemolysin OS=Serratia marcescens GN=shlA PE=1
SV=1
Length = 1608

Score = 29.6 bits (65), Expect = 4.9
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +2

Query: 50 SYRASAFPREESSSQEAPSVELHSAHHFTVSDEHLHKVADGVAGK 184
+YR + + SSSQ EL + V+D H H A + G+
Sbjct: 313 NYRGGIYVNDRSSSQTLTRTELKGKNISLVADNHAHLTATDIRGE 357


>sp|Q5NRP9|EDN1_ATEAB Endothelin-1 OS=Atelerix albiventris GN=EDN1
PE=2 SV=1
Length = 202

Score = 29.3 bits (64), Expect = 6.4
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 12/51 (23%)
Frame = -1

Query: 251 SPTLPQRPRNSIQCSIGRLRDNAC------------QRRHLLPYVSVHPIR 135
SP+ P RPR S +CS L D C H++PY P+R
Sbjct: 40 SPSPPWRPRRSKRCSCSSLMDKECVYFCHLDIIWVNTPEHVVPYGLGSPLR 90


>sp|P50773|VE2_HPV70 Regulatory protein E2 OS=Human papillomavirus
type 70 GN=E2 PE=3 SV=1
Length = 360

Score = 28.9 bits (63), Expect = 8.4
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = -3

Query: 186 CLPATPSATLCKCSSDTVK**AE*SSTDGAS*ELLSSRGNAEARYDRIGEGVAVYPHLGD 7
C T SA CKC S TDG +L++S+G + R+ G+ + GD
Sbjct: 236 CTKKTKSAPSCKCGVSRP------SETDGVFVDLVTSKGCNKRRHQCCGDTTPIVHLKGD 289

Query: 6 *N 1
N
Sbjct: 290 KN 291


>sp|Q8J257|PACC_PARBR pH-response transcription factor pacC/RIM101
OS=Paracoccidioides brasiliensis GN=pacC PE=3 SV=2
Length = 706

Score = 28.9 bits (63), Expect = 8.4
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Frame = +2

Query: 35 PSPILSYRASAFPREESSSQEAPSVELHSAHHFTVSDEHLHKVADGVAGKH-----CHAT 199
PS SY + P SS+ + +HH+T + H H + AG + A
Sbjct: 470 PSSAQSYTSGRSPVSVSSTHH----HIPPSHHYTHTHNHNHNHPNSSAGMYPTLPATSAQ 525

Query: 200 ARSSTGCYFGAVGEA 244
SST Y G G A
Sbjct: 526 DGSSTNTYHGVSGAA 540


>sp|Q9BG76|EDN1_SHEEP Endothelin-1 OS=Ovis aries GN=EDN1 PE=2 SV=1
Length = 202

Score = 28.9 bits (63), Expect = 8.4
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1

Query: 248 PTLPQRPRNSIQCSIGRLRDNAC 180
PT P RPR S +CS L D C
Sbjct: 41 PTTPWRPRRSKRCSCSSLMDKEC 63


>sp|Q96M20|CT152_HUMAN Uncharacterized protein C20orf152 OS=Homo
sapiens GN=C20orf152 PE=2 SV=2
Length = 576

Score = 28.9 bits (63), Expect = 8.4
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -1

Query: 257 VISPTLPQRPRNSIQCSIGRLRDNACQRRHLL-PYVSVHPIR*NDEQNEVRPMGLPESCS 81
++ P + RP SI+C++ ++ + + YV VH + EQ E+ +GL ++
Sbjct: 377 MLGPKIQSRPAQSIKCAMINIKPGELPKEAAVGAYVKVHTV----EQGEI--LGLHQAFL 430

Query: 80 PLGE 69
P GE
Sbjct: 431 PEGE 434


>sp|Q39247|2ABB_ARATH Serine/threonine protein phosphatase 2A 55 kDa
regulatory subunit B beta isoform OS=Arabidopsis
thaliana GN=PP2AB2 PE=2 SV=1
Length = 501

Score = 28.9 bits (63), Expect = 8.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2

Query: 26 TATPSPILSYRASAFPREESSSQEAPSVELHSAHHFTVSDEHL 154
T+ P P L +R S E ++ +E V++ SA F S +HL
Sbjct: 9 TSGPPPSLEWRFSQVFGERTAGEEVQEVDIISAIEFDKSGDHL 51


tr_hit_id A1JSN2
Definition tr|A1JSN2|A1JSN2_YERE8 Uroporphyrin-III C-methyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081)
Align length 58
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959525|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0004_O22, 5'
(269 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A1JSN2|A1JSN2_YERE8 Uroporphyrin-III C-methyltransferase OS=Y... 34 3.2

>tr|A1JSN2|A1JSN2_YERE8 Uroporphyrin-III C-methyltransferase
OS=Yersinia enterocolitica serotype O:8 / biotype 1B
(strain 8081) GN=cobA PE=3 SV=1
Length = 260

Score = 34.3 bits (77), Expect = 3.2
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +1

Query: 22 IDSYSFPYSIIPSFSVSPRGEQLSGSPIGRTSFCSSFYRIG*TLT*GSRWRRWQALSR 195
+ Y P+ ++P S S G +G P+ + SSF+ + + G+ + W AL++
Sbjct: 105 LSRYQIPFEVVPGISSSIGGLAYAGIPVTHRHYASSFHVVTGHMCQGNEPQNWNALAQ 162