DK959352 |
Clone id |
TST39A01NGRL0004_H08 |
Library |
TST39 |
Length |
505 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_H08. 5' end sequence. |
Accession |
DK959352 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GATTCTTGAAGCTCAAGTTCTCAGATGAGAAGGACATAACAAGCGTCAAAGAGACGCAGC CGCCGATAAACATCCATGCAGGACAGGTAGCAGACGAGTTCGCACCAGTTGATCACCCCA TGGAGCCTCCGGAAAACGATCAGCCTGTTCGTTGCCCACCTCCGGAGCCCTGCATTATAC ATGATGGGCGGTTGTGGAAGGAAAGGTTACAACTAAGTATTAAGAGGCGCAAGGAGCTTC CTTTCATGAGGGAGGCAGGCTTGGAGAGTGCCCACGCAAGAAGGCACACAAGTGAGCATT CCATGCCTTCGTCCATGAGTGCTCCAGCAGACACATTTCTAAAACTGTTGGAATCATAGA ACATGCTATGTACTGATGTGGGATTTATACACAAAGATGGCTCTATTTATGACAAAAGGA GCCATATAGTTTTTTGTACAATAGACATTTGGGGAATATTTACTATACAAGAATGTTTTG ATTAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6RJQ3 |
Definition |
sp|Q6RJQ3|UL141_HCMVM Protein UL141 OS=Human cytomegalovirus (strain Merlin) |
Align length |
86 |
Score (bit) |
33.5 |
E-value |
0.52 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NWK8 |
Definition |
tr|A9NWK8|A9NWK8_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
120 |
Score (bit) |
119.0 |
E-value |
1.0e-25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959352|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0004_H08, 5' (483 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NWK8|A9NWK8_PICSI Putative uncharacterized protein OS=Picea... 119 1e-25 tr|A7PBY6|A7PBY6_VITVI Chromosome chr2 scaffold_11, whole genome... 92 2e-17 tr|A5BYJ6|A5BYJ6_VITVI Putative uncharacterized protein OS=Vitis... 92 2e-17 tr|Q9C506|Q9C506_ARATH Putative uncharacterized protein T12O21.1... 88 2e-16 tr|Q8VYV3|Q8VYV3_ARATH At1g31940/F5M6.6 (Putative uncharacterize... 88 2e-16 tr|Q8S8M7|Q8S8M7_ARATH Expressed protein (At2g35585) (Putative u... 87 5e-16 tr|Q6Z8F6|Q6Z8F6_ORYSJ Os02g0697700 protein OS=Oryza sativa subs... 83 6e-15 tr|A2X8L1|A2X8L1_ORYSI Putative uncharacterized protein OS=Oryza... 83 6e-15 tr|A9XNS9|A9XNS9_9MYRT Putative uncharacterized protein (Fragmen... 80 5e-14 tr|A9XNT1|A9XNT1_9MYRT Putative uncharacterized protein (Fragmen... 80 7e-14 tr|A9XNT0|A9XNT0_9MYRT Putative uncharacterized protein (Fragmen... 80 7e-14 tr|B6UEH4|B6UEH4_MAIZE Putative uncharacterized protein OS=Zea m... 78 2e-13 tr|B6TJW1|B6TJW1_MAIZE Putative uncharacterized protein OS=Zea m... 78 2e-13 tr|A9XNS8|A9XNS8_9MYRT Putative uncharacterized protein (Fragmen... 77 3e-13 tr|A9T0F8|A9T0F8_PHYPA Predicted protein OS=Physcomitrella paten... 67 4e-10 tr|A9RGQ7|A9RGQ7_PHYPA Predicted protein OS=Physcomitrella paten... 67 6e-10 tr|A9TUQ3|A9TUQ3_PHYPA Predicted protein OS=Physcomitrella paten... 64 4e-09 tr|A9T6A4|A9T6A4_PHYPA Predicted protein OS=Physcomitrella paten... 63 8e-09 tr|A9P9W6|A9P9W6_POPTR Putative uncharacterized protein OS=Popul... 55 2e-06 tr|A5C1H9|A5C1H9_VITVI Putative uncharacterized protein OS=Vitis... 53 9e-06 tr|A9TEI0|A9TEI0_PHYPA Predicted protein OS=Physcomitrella paten... 49 1e-04 tr|A9RT80|A9RT80_PHYPA Predicted protein OS=Physcomitrella paten... 47 6e-04 tr|B6U318|B6U318_MAIZE Putative uncharacterized protein OS=Zea m... 43 0.009 tr|A9RDH7|A9RDH7_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.012 tr|Q2V4B3|Q2V4B3_ARATH Uncharacterized protein At2g01913.1 (At2g... 42 0.015 tr|B6TUP2|B6TUP2_MAIZE Putative uncharacterized protein OS=Zea m... 40 0.057 tr|A9V214|A9V214_MONBE Predicted protein OS=Monosiga brevicollis... 36 1.1 tr|Q8T101|Q8T101_BOMMO Titin-like protein OS=Bombyx mori GN=Bmti... 35 1.8 tr|Q8MMJ9|Q8MMJ9_BOMMO Titin-like protein OS=Bombyx mori GN=Bmti... 35 1.8 tr|A5A0T8|A5A0T8_BOMMO Titin (Fragment) OS=Bombyx mori PE=2 SV=1 35 1.8
>tr|A9NWK8|A9NWK8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 145
Score = 119 bits (297), Expect = 1e-25 Identities = 60/120 (50%), Positives = 79/120 (65%), Gaps = 6/120 (5%) Frame = +3
Query: 21 SDEKDITSVKETQPPI--NIHAGQVADEFAPVDHPMEPPENDQPVRCPPPEPCIIHDGRL 194 +DE++ T + P + H + DEF PV+HP+EPP+ DQPVRCPPPEP I+HDG + Sbjct: 21 TDEREGTPSGKDSPATLADNHGVEPTDEFKPVEHPLEPPDKDQPVRCPPPEPSILHDGTI 80
Query: 195 WKERLQLSIKRRKELPFMREAGLES--AHARRHT--SEHSMPSSMSAPADTFLKLLES*N 362 WKERL+ S +RR E P +RE+G +S H RRHT SE S+ S S P + LKLL+ N Sbjct: 81 WKERLEASARRRAEFPIIRESGSQSQMLHRRRHTFSSEQSIMPSFSCPEHSLLKLLDECN 140
>tr|A7PBY6|A7PBY6_VITVI Chromosome chr2 scaffold_11, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015630001 PE=4 SV=1 Length = 154
Score = 91.7 bits (226), Expect = 2e-17 Identities = 49/101 (48%), Positives = 64/101 (63%), Gaps = 5/101 (4%) Frame = +3
Query: 75 HAGQVADEFAPVDHPMEPPENDQPVRCPPPEPCIIHDGRLWKERLQLSIKRRKELPFMRE 254 H +VA EF PV+HP EP +ND+PV+CP PEP I++DGR+WKER+ S++RR +L M+E Sbjct: 50 HGIEVAVEFKPVEHPTEPLDNDRPVQCPLPEPSILNDGRIWKERVSASVRRRSDLSVMKE 109
Query: 255 AG-LESAHA----RRHTSEHSMPSSMSAPADTFLKLLES*N 362 LES A R S + S+SAP L LLE N Sbjct: 110 GNFLESEAAGKPPRPPQSNRLILPSLSAPEHNLLNLLEECN 150
>tr|A5BYJ6|A5BYJ6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022546 PE=4 SV=1 Length = 154
Score = 91.7 bits (226), Expect = 2e-17 Identities = 49/101 (48%), Positives = 64/101 (63%), Gaps = 5/101 (4%) Frame = +3
Query: 75 HAGQVADEFAPVDHPMEPPENDQPVRCPPPEPCIIHDGRLWKERLQLSIKRRKELPFMRE 254 H +VA EF PV+HP EP +ND+PV+CP PEP I++DGR+WKER+ S++RR +L M+E Sbjct: 50 HGIEVAVEFKPVEHPTEPLDNDRPVQCPLPEPSILNDGRIWKERVSASVRRRSDLSVMKE 109
Query: 255 AG-LESAHA----RRHTSEHSMPSSMSAPADTFLKLLES*N 362 LES A R S + S+SAP L LLE N Sbjct: 110 GNFLESEAAGKPPRPPQSNRLILPSLSAPEHNLLNLLEECN 150
>tr|Q9C506|Q9C506_ARATH Putative uncharacterized protein T12O21.15 (Putative uncharacterized protein F5M6.6) OS=Arabidopsis thaliana GN=T12O21.15 PE=4 SV=1 Length = 142
Score = 87.8 bits (216), Expect = 2e-16 Identities = 47/118 (39%), Positives = 69/118 (58%), Gaps = 6/118 (5%) Frame = +3
Query: 33 DITSVKETQPPINIHAGQVADEFAPVDHPMEPPENDQPVRCPPPEPCIIHDGRLWKERLQ 212 D+ + T H +VA EF PV+HP+EP +ND P++CP PEP I++DGR+WKER+ Sbjct: 17 DVIAATTTTATTATHGIEVATEFKPVEHPVEPLDNDLPIQCPLPEPSILNDGRIWKERVS 76
Query: 213 LSIKRRKELPFMR-EAGLESAHA-----RRHTSEHSMPSSMSAPADTFLKLLES*NML 368 S++R+ +L ++ EA ES + R S+ S+SAP L LLE N + Sbjct: 77 ASMRRKGDLQIVKDEAASESDGSAPKPPRPPQPNRSILPSLSAPEHNLLNLLEECNAM 134
>tr|Q8VYV3|Q8VYV3_ARATH At1g31940/F5M6.6 (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At1g31940 PE=2 SV=1 Length = 158
Score = 87.8 bits (216), Expect = 2e-16 Identities = 47/118 (39%), Positives = 69/118 (58%), Gaps = 6/118 (5%) Frame = +3
Query: 33 DITSVKETQPPINIHAGQVADEFAPVDHPMEPPENDQPVRCPPPEPCIIHDGRLWKERLQ 212 D+ + T H +VA EF PV+HP+EP +ND P++CP PEP I++DGR+WKER+ Sbjct: 33 DVIAATTTTATTATHGIEVATEFKPVEHPVEPLDNDLPIQCPLPEPSILNDGRIWKERVS 92
Query: 213 LSIKRRKELPFMR-EAGLESAHA-----RRHTSEHSMPSSMSAPADTFLKLLES*NML 368 S++R+ +L ++ EA ES + R S+ S+SAP L LLE N + Sbjct: 93 ASMRRKGDLQIVKDEAASESDGSAPKPPRPPQPNRSILPSLSAPEHNLLNLLEECNAM 150
>tr|Q8S8M7|Q8S8M7_ARATH Expressed protein (At2g35585) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At2g35585 PE=2 SV=1 Length = 156
Score = 86.7 bits (213), Expect = 5e-16 Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 11/104 (10%) Frame = +3
Query: 75 HAGQVADEFAPVDHPMEPPENDQPVRCPPPEPCIIHDGRLWKERLQL-SIKRRKELPFMR 251 H +VA EF PVDHPMEP +NDQP++CP PEP I++DGRLWKER+ S++RR +L ++ Sbjct: 46 HGIEVATEFKPVDHPMEPLDNDQPIQCPLPEPSILNDGRLWKERVSASSMRRRSDLAIVQ 105
Query: 252 E----------AGLESAHARRHTSEHSMPSSMSAPADTFLKLLE 353 + + S ++ +T+ +P S+SAP L LLE Sbjct: 106 DGMDEESDVSVTSIPSRTSQCNTNRPILP-SLSAPEHDLLNLLE 148
>tr|Q6Z8F6|Q6Z8F6_ORYSJ Os02g0697700 protein OS=Oryza sativa subsp. japonica GN=P0459B01.8 PE=2 SV=1 Length = 156
Score = 83.2 bits (204), Expect = 6e-15 Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 6/117 (5%) Frame = +3
Query: 21 SDEKDITSVKETQPPINIHAGQVADEFAPVDHPMEPPENDQPVRCPPPEPCIIHDGRLWK 200 S E D +V P H +V EF PV+HP+EP DQPV+CP PEP I+HDGR+WK Sbjct: 32 SGEPDSQAVPADSP----HGIEVGVEFKPVEHPVEPVNLDQPVKCPLPEPSILHDGRIWK 87
Query: 201 ERLQLS-IKRRKELPFMREAG-LES----AHARRHTSEHSMPSSMSAPADTFLKLLE 353 ER+ + ++ +LP ++E LES A +R + ++ S+SAP + L LL+ Sbjct: 88 ERIATAGVRVMTDLPVVKEGSQLESDSSGARSRSAVPKRAILPSVSAPENNILALLD 144
>tr|A2X8L1|A2X8L1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08572 PE=4 SV=1 Length = 156
Score = 83.2 bits (204), Expect = 6e-15 Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 6/117 (5%) Frame = +3
Query: 21 SDEKDITSVKETQPPINIHAGQVADEFAPVDHPMEPPENDQPVRCPPPEPCIIHDGRLWK 200 S E D +V P H +V EF PV+HP+EP DQPV+CP PEP I+HDGR+WK Sbjct: 32 SGEPDSQAVPADSP----HGIEVGVEFKPVEHPVEPVNLDQPVKCPLPEPSILHDGRIWK 87
Query: 201 ERLQLS-IKRRKELPFMREAG-LES----AHARRHTSEHSMPSSMSAPADTFLKLLE 353 ER+ + ++ +LP ++E LES A +R + ++ S+SAP + L LL+ Sbjct: 88 ERIATAGVRVMTDLPVVKEGSQLESDSSGARSRSAVPKRAILPSVSAPENNILALLD 144
>tr|A9XNS9|A9XNS9_9MYRT Putative uncharacterized protein (Fragment) OS=Sonneratia caseolaris PE=4 SV=1 Length = 114
Score = 80.1 bits (196), Expect = 5e-14 Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 7/91 (7%) Frame = +3
Query: 75 HAGQVADEFAPVDHPMEPPENDQPVRCPPPEPCIIHDGRLWKERLQLSIKRRKELPFMRE 254 H +VA EF PV+HP+EP +ND+P++CP PEP I++DGR+WKER+ S +RR +LP M E Sbjct: 24 HGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERV-ASARRRPDLPPMME 82
Query: 255 AG----LESAHARR---HTSEHSMPSSMSAP 326 G ES R+ TS +P S+SAP Sbjct: 83 GGGSVEPESDVTRQRAAQTSRRILP-SISAP 112
>tr|A9XNT1|A9XNT1_9MYRT Putative uncharacterized protein (Fragment) OS=Sonneratia apetala PE=4 SV=1 Length = 114
Score = 79.7 bits (195), Expect = 7e-14 Identities = 34/60 (56%), Positives = 48/60 (80%) Frame = +3
Query: 75 HAGQVADEFAPVDHPMEPPENDQPVRCPPPEPCIIHDGRLWKERLQLSIKRRKELPFMRE 254 H +VA EF PV+HP+EP +ND+P++CP PEP I++DGR+WKER+ S +RR +LP M+E Sbjct: 24 HGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERV-ASARRRPDLPIMKE 82
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