DK959341 |
Clone id |
TST39A01NGRL0004_G20 |
Library |
TST39 |
Length |
682 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_G20. 5' end sequence. |
Accession |
DK959341 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL922Contig1 |
Sequence |
GGGGAAGATGGCGGGTCTAAGAATTTCCCTCTCTCCGGCAGCCCCGCTTGTGGGTCGCCC AGACGGTCATGGGTCTGCCCAGTCTCCAAGGTTTCTGGGTTGCAGAGAGTTCCATCTTTT CTGGCCAGGCCAAAAAGGCAGCAGACACATCCATCACCGCAACAAAATAGTATGTGCATT GGGTGGTTCTTCTGATGAAGGTATGGCAGTTTTTCCGAAGATAAATGTTGGAGATCCATA TAAGCGGCTAGGTATTCCCCGTGATGCTTCTGAAGAAGAAATCCGAGAAGCTTACAAATA TCTCATGGCACAGTATGGTTGGCATGATAAAAGCAGGACTTCCATTGAAACTGCCTATGA CAAAATTCTATTGGAGAGTCTGAAGTCTAGGAGGAGCCCCAAAATCGACGTTCAAAAAGC CTTGAGAAATAATTATGCAAAGCTGCCACCCTGGGTTCGCAACTTGTCGAATATATATGA TGTTCCTTCTTCAAAAGTAATCTTAATTAGGGCAGCATTTTTTACTCTCTTGGGAGTATG GAGTGCACTTGATCAGACACAAGGAGGACCAGCATTCCAGGTTGCGGTTTCTCTTGTTGG TTGCATTTATTTTCTGAACGACCGACTCCGGAGCAAATGGAAAGCATTGTTTGCATGGAT TGGTAGCTTTGTGATTGGCTGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9HGN7 |
Definition |
sp|Q9HGN7|SEC63_SCHPO Translocation protein sec63 OS=Schizosaccharomyces pombe |
Align length |
74 |
Score (bit) |
39.3 |
E-value |
0.019 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SI00 |
Definition |
tr|A9SI00|A9SI00_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
156 |
Score (bit) |
172.0 |
E-value |
2.0e-41 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959341|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0004_G20, 5' (669 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SI00|A9SI00_PHYPA Predicted protein OS=Physcomitrella paten... 172 2e-41 tr|A9NX64|A9NX64_PICSI Putative uncharacterized protein OS=Picea... 165 3e-39 tr|A9TGC1|A9TGC1_PHYPA Predicted protein OS=Physcomitrella paten... 159 1e-37 tr|A5AD93|A5AD93_VITVI Putative uncharacterized protein OS=Vitis... 157 6e-37 tr|A9SGZ3|A9SGZ3_PHYPA Predicted protein OS=Physcomitrella paten... 156 1e-36 tr|Q307Y4|Q307Y4_SOLTU Cell growth defect factor-like OS=Solanum... 141 4e-32 tr|A3BYC5|A3BYC5_ORYSJ Putative uncharacterized protein OS=Oryza... 139 1e-31 tr|A2Z0Q5|A2Z0Q5_ORYSI Putative uncharacterized protein OS=Oryza... 139 1e-31 tr|B4FT56|B4FT56_MAIZE Putative uncharacterized protein OS=Zea m... 138 4e-31 tr|Q9FN50|Q9FN50_ARATH Emb|CAB62636.1 (Cell growth defect factor... 137 6e-31 tr|A3BT56|A3BT56_ORYSJ Putative uncharacterized protein OS=Oryza... 135 2e-30 tr|A9S115|A9S115_PHYPA Predicted protein (Fragment) OS=Physcomit... 135 3e-30 tr|Q0DTD2|Q0DTD2_ORYSJ Os03g0255200 protein OS=Oryza sativa subs... 133 1e-29 tr|B8AKA7|B8AKA7_ORYSI Putative uncharacterized protein OS=Oryza... 133 1e-29 tr|B6TCK1|B6TCK1_MAIZE DnaJ domain containing protein OS=Zea may... 130 6e-29 tr|B6TKC3|B6TKC3_MAIZE Putative uncharacterized protein OS=Zea m... 126 1e-27 tr|Q94C78|Q94C78_ARATH Putative uncharacterized protein At3g5114... 124 4e-27 tr|Q9SD32|Q9SD32_ARATH Putative uncharacterized protein F24M12.1... 121 3e-26 tr|B4FF72|B4FF72_MAIZE Putative uncharacterized protein OS=Zea m... 105 2e-21 tr|Q00SI4|Q00SI4_OSTTA Homology to unknown gene OS=Ostreococcus ... 93 2e-17 tr|A4SA03|A4SA03_OSTLU Predicted protein OS=Ostreococcus lucimar... 89 3e-16 tr|Q6H5B0|Q6H5B0_ORYSJ Os09g0380200 protein OS=Oryza sativa subs... 76 2e-12 tr|B7K9K5|B7K9K5_9CHRO Heat shock protein DnaJ domain protein OS... 76 2e-12 tr|Q60D81|Q60D81_BRAOL Putative Expressed protein OS=Brassica ol... 76 2e-12 tr|Q2JL16|Q2JL16_SYNJB Putative uncharacterized protein OS=Synec... 71 5e-11 tr|A8IKQ9|A8IKQ9_CHLRE Predicted protein OS=Chlamydomonas reinha... 70 1e-10 tr|Q0J5P0|Q0J5P0_ORYSJ Os08g0416900 protein (Fragment) OS=Oryza ... 69 2e-10 tr|P73116|P73116_SYNY3 Slr1918 protein OS=Synechocystis sp. (str... 67 1e-09 tr|Q7NLT2|Q7NLT2_GLOVI Glr1039 protein OS=Gloeobacter violaceus ... 66 2e-09 tr|Q3M3C6|Q3M3C6_ANAVT Putative uncharacterized protein OS=Anaba... 66 2e-09
>tr|A9SI00|A9SI00_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_212552 PE=4 SV=1 Length = 214
Score = 172 bits (435), Expect = 2e-41 Identities = 82/156 (52%), Positives = 113/156 (72%), Gaps = 2/156 (1%) Frame = +2
Query: 185 GSSDEGMA--VFPKINVGDPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIETAY 358 GSSD + VFP++ V DP+KRLG+ +DASEEE+REA YL+ QY H+KSR +IE+AY Sbjct: 6 GSSDVNSSGPVFPRLGVQDPFKRLGVSQDASEEEVREARNYLVEQYNGHEKSREAIESAY 65
Query: 359 DKILLESLKSRRSPKIDVQKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLLGV 538 D I+++S + R++ K+D++ LR + PPWVR + N+ +VPS ++ RAA F LLGV Sbjct: 66 DTIIMQSFRVRKASKMDLKSNLRKKVEESPPWVRGIVNMIEVPSKTIMGQRAALFLLLGV 125
Query: 539 WSALDQTQGGPAFQVAVSLVGCIYFLNDRLRSKWKA 646 WS + GGPAFQVA+SL C+YFLNDRL+S +A Sbjct: 126 WSVFNPANGGPAFQVAISLAACVYFLNDRLKSVARA 161
>tr|A9NX64|A9NX64_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 279
Score = 165 bits (417), Expect = 3e-39 Identities = 82/184 (44%), Positives = 124/184 (67%), Gaps = 10/184 (5%) Frame = +2
Query: 146 HIHHRNKIV-------CALGGSSDEGMA---VFPKINVGDPYKRLGIPRDASEEEIREAY 295 H RN+++ CA+ S + VFP++NV DPYKRLG+ + ASEEEI+EA Sbjct: 50 HAQSRNELLIRRLEPRCAMDASFGGRVGHPPVFPRVNVWDPYKRLGVSKYASEEEIQEAR 109
Query: 296 KYLMAQYGWHDKSRTSIETAYDKILLESLKSRRSPKIDVQKALRNNYAKLPPWVRNLSNI 475 +L+ QY H++S SIE A++KI+++S + R+ KI+++ L+ + PPWVR+L N Sbjct: 110 NFLIEQYAGHERSVESIEAAFEKIIMKSFRERKRSKINLKSKLKKKVDESPPWVRSLINF 169
Query: 476 YDVPSSKVILIRAAFFTLLGVWSALDQTQGGPAFQVAVSLVGCIYFLNDRLRSKWKALFA 655 +VP S+VI+ RA F ++GVWS ++ ++GGPAFQVAVSLV CIYFLN++++S +A Sbjct: 170 LEVPPSEVIIRRACLFAVIGVWSVMNSSEGGPAFQVAVSLVTCIYFLNEKVKSIGRACVL 229
Query: 656 WIGS 667 G+ Sbjct: 230 GFGA 233
>tr|A9TGC1|A9TGC1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_222052 PE=4 SV=1 Length = 262
Score = 159 bits (403), Expect = 1e-37 Identities = 91/205 (44%), Positives = 124/205 (60%), Gaps = 7/205 (3%) Frame = +2
Query: 74 SAQSPRFL--GCREFHLFWPGQKGSRHIHHRNKIVC-----ALGGSSDEGMAVFPKINVG 232 S QS RF R+F L P KG +VC GG+ + VFP+ NV Sbjct: 21 SLQSHRFPTPALRQFGLSQPLPKG---------LVCRAADATFGGAENLKPPVFPRRNVR 71
Query: 233 DPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIETAYDKILLESLKSRRSPKIDV 412 DP+K LG+ DASEEEIREA YL QY H+ SR +IE AY+KI++ S + R++ KI++ Sbjct: 72 DPFKLLGVSPDASEEEIREAKNYLTEQYYGHEYSREAIEAAYEKIIMHSFRVRKASKINL 131
Query: 413 QKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLLGVWSALDQTQGGPAFQVAVS 592 + L+ + PPWV+ + N+ +VP+ + RAA F LLGVWS + +GGPAFQVAVS Sbjct: 132 KTNLKKKVEESPPWVQAILNMVEVPNKTITGQRAALFFLLGVWSVFNPAEGGPAFQVAVS 191
Query: 593 LVGCIYFLNDRLRSKWKALFAWIGS 667 L C+YF+N RL+S +A +GS Sbjct: 192 LAACVYFINLRLQSLGRAFVLGLGS 216
>tr|A5AD93|A5AD93_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017550 PE=4 SV=1 Length = 235
Score = 157 bits (397), Expect = 6e-37 Identities = 79/186 (42%), Positives = 117/186 (62%), Gaps = 5/186 (2%) Frame = +2
Query: 125 PGQKGSRHIHHRNKIV----CALGGSSDEG-MAVFPKINVGDPYKRLGIPRDASEEEIRE 289 P ++ S+ + ++ CA+ G + FP+I V DPYKRLGIP DASEEEI Sbjct: 4 PARENSKKLKANGLVIRGPRCAVDTPYGGGNLTKFPRITVWDPYKRLGIPPDASEEEIWS 63
Query: 290 AYKYLMAQYGWHDKSRTSIETAYDKILLESLKSRRSPKIDVQKALRNNYAKLPPWVRNLS 469 + +L+ QY H++S SIE A++KIL+ S +RR KI+++ L+ + PPWV+NL Sbjct: 64 SRNFLLQQYAGHERSEESIEAAFEKILMASFINRRKTKINLKSKLKKKVEESPPWVKNLL 123
Query: 470 NIYDVPSSKVILIRAAFFTLLGVWSALDQTQGGPAFQVAVSLVGCIYFLNDRLRSKWKAL 649 N ++P+++VI R F +G WS ++ +GGPAFQVAVSL CIYFLN++ +S +A Sbjct: 124 NFVELPATEVIFRRLFLFAFMGGWSIINSAEGGPAFQVAVSLAACIYFLNEKTKSLARAF 183
Query: 650 FAWIGS 667 +GS Sbjct: 184 IIGLGS 189
>tr|A9SGZ3|A9SGZ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_129803 PE=4 SV=1 Length = 203
Score = 156 bits (395), Expect = 1e-36 Identities = 77/153 (50%), Positives = 105/153 (68%) Frame = +2
Query: 209 VFPKINVGDPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIETAYDKILLESLKS 388 VFP+ NV DP+K LG+ DASEEEIREA YL QY H+ SR +IE AY+KI++ S + Sbjct: 5 VFPRRNVRDPFKLLGLSSDASEEEIREAKNYLTEQYHGHEYSREAIEAAYEKIIMHSYRV 64
Query: 389 RRSPKIDVQKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLLGVWSALDQTQGG 568 R++ KI+++ L+ + PPWVR + N+ +VP+ +I RAA F LLGVWS + +GG Sbjct: 65 RKASKINLKTNLKKKVEESPPWVRAILNMVEVPNKTIIGQRAALFFLLGVWSVFNPAEGG 124
Query: 569 PAFQVAVSLVGCIYFLNDRLRSKWKALFAWIGS 667 PAFQVAVSL C+YF+N RL+S +A + S Sbjct: 125 PAFQVAVSLAACVYFINLRLKSLGRAFMLGLSS 157
>tr|Q307Y4|Q307Y4_SOLTU Cell growth defect factor-like OS=Solanum tuberosum PE=2 SV=1 Length = 251
Score = 141 bits (355), Expect = 4e-32 Identities = 67/164 (40%), Positives = 102/164 (62%) Frame = +2
Query: 173 CALGGSSDEGMAVFPKINVGDPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIET 352 CA + + F ++NV DPYKRLGI RDASEEE+ + +L+ QY H++S SIE Sbjct: 41 CATDTAYGGNIPKFSRLNVWDPYKRLGISRDASEEEVWSSRNFLLNQYANHERSAESIEA 100
Query: 353 AYDKILLESLKSRRSPKIDVQKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLL 532 A++KIL++S +R+ KI+++ L+ + PPWV+NL + ++P +IL R F + Sbjct: 101 AFEKILMKSFINRKKTKINLKTRLKKQVEESPPWVQNLLSFVELPPPVIILRRLFLFGFM 160
Query: 533 GVWSALDQTQGGPAFQVAVSLVGCIYFLNDRLRSKWKALFAWIG 664 WS ++ + GPAFQVA+S C+YFLND+ +S +A G Sbjct: 161 ACWSVMNSAEAGPAFQVAISFGACVYFLNDKTKSLGRAALIGFG 204
>tr|A3BYC5|A3BYC5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_028047 PE=4 SV=1 Length = 269
Score = 139 bits (351), Expect = 1e-31 Identities = 65/154 (42%), Positives = 98/154 (63%) Frame = +2
Query: 185 GSSDEGMAVFPKINVGDPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIETAYDK 364 G S E + VFP+ + DPYK LG+ RDA+EEEIR A +L+ QY H+ S +IE AY+K Sbjct: 63 GFSYEHVPVFPRYRIRDPYKLLGVDRDAAEEEIRSARNFLIQQYAGHEPSEEAIEGAYEK 122
Query: 365 ILLESLKSRRSPKIDVQKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLLGVWS 544 I+++S + R+ KI+++ L+ + P WV+ L ++VP +I R FF + WS Sbjct: 123 IIMKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGYFEVPQMDIISRRLFFFAFIAGWS 182
Query: 545 ALDQTQGGPAFQVAVSLVGCIYFLNDRLRSKWKA 646 + GPAFQ+A+SL CIYFLND++++ +A Sbjct: 183 IATSAENGPAFQLAISLFSCIYFLNDKMKNLMRA 216
>tr|A2Z0Q5|A2Z0Q5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31181 PE=4 SV=1 Length = 269
Score = 139 bits (351), Expect = 1e-31 Identities = 65/154 (42%), Positives = 98/154 (63%) Frame = +2
Query: 185 GSSDEGMAVFPKINVGDPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIETAYDK 364 G S E + VFP+ + DPYK LG+ RDA+EEEIR A +L+ QY H+ S +IE AY+K Sbjct: 63 GFSYEHVPVFPRYRIRDPYKLLGVDRDAAEEEIRSARNFLIQQYAGHEPSEEAIEGAYEK 122
Query: 365 ILLESLKSRRSPKIDVQKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLLGVWS 544 I+++S + R+ KI+++ L+ + P WV+ L ++VP +I R FF + WS Sbjct: 123 IIMKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGYFEVPQMDIISRRLFFFAFIAGWS 182
Query: 545 ALDQTQGGPAFQVAVSLVGCIYFLNDRLRSKWKA 646 + GPAFQ+A+SL CIYFLND++++ +A Sbjct: 183 IATSAENGPAFQLAISLFSCIYFLNDKMKNLMRA 216
>tr|B4FT56|B4FT56_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 270
Score = 138 bits (347), Expect = 4e-31 Identities = 65/152 (42%), Positives = 98/152 (64%) Frame = +2
Query: 191 SDEGMAVFPKINVGDPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIETAYDKIL 370 S E + VFP+ + DPYK LG+ RDASEEEIR A +L+ QY H+ S +IE AY+KI+ Sbjct: 66 SYEHVPVFPRYRIRDPYKLLGVDRDASEEEIRGARNFLIQQYAGHEPSEEAIEGAYEKII 125
Query: 371 LESLKSRRSPKIDVQKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLLGVWSAL 550 ++S + R+ KI+++ L+ + P WV+ L ++VPS +I R FF + WS Sbjct: 126 MKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGCFEVPSMDIISRRLFFFAFIAGWSIA 185
Query: 551 DQTQGGPAFQVAVSLVGCIYFLNDRLRSKWKA 646 + GPAFQ+A+SL CIYFLN+++++ +A Sbjct: 186 TSAENGPAFQLAISLFSCIYFLNEKMKNLLRA 217
>tr|Q9FN50|Q9FN50_ARATH Emb|CAB62636.1 (Cell growth defect factor) (At5g23040/MYJ24_3) OS=Arabidopsis thaliana GN=AtCDF1 PE=2 SV=1 Length = 258
Score = 137 bits (345), Expect = 6e-31 Identities = 65/167 (38%), Positives = 100/167 (59%) Frame = +2
Query: 167 IVCALGGSSDEGMAVFPKINVGDPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSI 346 + C + S + FP+ V DPYKRLG+ ASEEEI + +L+ QY H++S SI Sbjct: 46 VKCTVDSSYGGNVPTFPRTRVWDPYKRLGVSPYASEEEIWASRNFLLQQYAGHERSEESI 105
Query: 347 ETAYDKILLESLKSRRSPKIDVQKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFT 526 E A++K+L+ S R+ KI+++ L+ + PPW++ L + ++P I R F Sbjct: 106 EGAFEKLLMSSFIRRKKTKINLKSKLKKKVEESPPWLKALLDFVEMPPMDTIFRRLFLFA 165
Query: 527 LLGVWSALDQTQGGPAFQVAVSLVGCIYFLNDRLRSKWKALFAWIGS 667 +G WS ++ +GGPAFQVAVSL C+YFLN++ +S +A IG+ Sbjct: 166 FMGGWSIMNSAEGGPAFQVAVSLAACVYFLNEKTKSLGRACLIGIGA 212
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