DK959180
Clone id TST39A01NGRL0003_P22
Library
Length 231
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_P22. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CCGAAGAGTCTCTCTCTCTCTCTCTCCCCCCCCCACGCCACAACCATACACTCACGCGCA
CACTCGCACCCACACTCACAGAAACCTTCGAAGGAGCCGACTCTGCTTTGTATACATCCT
CGTGTGCTCTGACGCCAGTTTACATAATTTCCTGTGTCTTCTCCAATACTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCCCCCCGCCCCCCCCCCC
■■Homology search results ■■ -
sp_hit_id Q8TB68
Definition sp|Q8TB68|PRR7_HUMAN Proline-rich protein 7 OS=Homo sapiens
Align length 26
Score (bit) 26.9
E-value 2.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959180|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_P22, 5'
(231 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8TB68|PRR7_HUMAN Proline-rich protein 7 OS=Homo sapiens GN=P... 27 2.7
sp|P46062|SIPA1_MOUSE Signal-induced proliferation-associated pr... 30 4.9
sp|P56222|PO3F2_RAT POU domain, class 3, transcription factor 2 ... 30 4.9
sp|P31360|PO3F2_MOUSE POU domain, class 3, transcription factor ... 30 4.9
sp|P20265|PO3F2_HUMAN POU domain, class 3, transcription factor ... 30 4.9
sp|O82798|ARR4_ARATH Two-component response regulator ARR4 OS=Ar... 29 8.5

>sp|Q8TB68|PRR7_HUMAN Proline-rich protein 7 OS=Homo sapiens GN=PRR7
PE=2 SV=1
Length = 274

Score = 26.9 bits (58), Expect(2) = 2.7
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +1

Query: 49 HSRAHSHPHSQK-PSKEPTLLCIHPR 123
H+ AH HPH P PT L + PR
Sbjct: 110 HAHAHPHPHHHALPHPPPTHLSVPPR 135



Score = 23.9 bits (50), Expect(2) = 2.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1

Query: 28 PPHATTIHSRAHSHPH 75
PPH + + + AH+H H
Sbjct: 78 PPHRSRLEAPAHAHSH 93


>sp|P46062|SIPA1_MOUSE Signal-induced proliferation-associated
protein 1 OS=Mus musculus GN=Sipa1 PE=2 SV=2
Length = 1037

Score = 29.6 bits (65), Expect = 4.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1

Query: 28 PPHATTIHSRAHSHPHSQKPSKEPTLLCIHPRVL 129
PP + +RAHSH + +P+ PT L P L
Sbjct: 60 PPTPASPRARAHSHEDASRPAATPTRLFTDPLAL 93


>sp|P56222|PO3F2_RAT POU domain, class 3, transcription factor 2
OS=Rattus norvegicus GN=Pou3f2 PE=2 SV=1
Length = 445

Score = 29.6 bits (65), Expect = 4.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1

Query: 31 PHATTIHSRAHSHPHSQKPSKEP 99
PH H HSHPH Q P P
Sbjct: 224 PHHADHHPHPHSHPHQQPPPPPP 246


>sp|P31360|PO3F2_MOUSE POU domain, class 3, transcription factor 2
OS=Mus musculus GN=Pou3f2 PE=2 SV=1
Length = 445

Score = 29.6 bits (65), Expect = 4.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1

Query: 31 PHATTIHSRAHSHPHSQKPSKEP 99
PH H HSHPH Q P P
Sbjct: 224 PHHADHHPHPHSHPHQQPPPPPP 246


>sp|P20265|PO3F2_HUMAN POU domain, class 3, transcription factor 2
OS=Homo sapiens GN=POU3F2 PE=1 SV=4
Length = 443

Score = 29.6 bits (65), Expect = 4.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1

Query: 31 PHATTIHSRAHSHPHSQKPSKEP 99
PH H HSHPH Q P P
Sbjct: 222 PHHADHHPHPHSHPHQQPPPPPP 244


>sp|O82798|ARR4_ARATH Two-component response regulator ARR4
OS=Arabidopsis thaliana GN=ARR4 PE=1 SV=1
Length = 259

Score = 28.9 bits (63), Expect = 8.5
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +3

Query: 9 SLSLSLPPPRHNHTLTRTLAPTLTETFEGADSALYTSSCALTPVYIIS 152
S++ SLPPP T++ +P LT + E +D SS L+PV I S
Sbjct: 181 SVNSSLPPPSPPLTISPESSPPLTVSTESSD-----SSPPLSPVEIFS 223


tr_hit_id B2CJ80
Definition tr|B2CJ80|B2CJ80_9HYPO Coatamer subunit protein OS=Epichloe festucae
Align length 57
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959180|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_P22, 5'
(231 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B2CJ80|B2CJ80_9HYPO Coatamer subunit protein OS=Epichloe fest... 34 3.2
tr|B3SAW3|B3SAW3_TRIAD Putative uncharacterized protein OS=Trich... 33 7.1

>tr|B2CJ80|B2CJ80_9HYPO Coatamer subunit protein OS=Epichloe
festucae GN=17A8-09 PE=4 SV=1
Length = 798

Score = 34.3 bits (77), Expect = 3.2
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3

Query: 3 EESLSLSLPPPRHNHTLTRTLAPTLTETFEGA-DSALYTSSCALTPVYIISCVFSNT 170
E+ LSL+ PRH P T T EGA + AL TSS +L +Y++S + S++
Sbjct: 527 EKPLSLTSANPRHEQGAKPN--PATTNTEEGAANDALDTSSASLVALYVVSDILSSS 581


>tr|B3SAW3|B3SAW3_TRIAD Putative uncharacterized protein
OS=Trichoplax adhaerens GN=TRIADDRAFT_32433 PE=4 SV=1
Length = 872

Score = 33.1 bits (74), Expect = 7.1
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +3

Query: 39 HNHTLTRTLAPTLTETFEGADSALYTSSC 125
+NHTLT AP LT F+ DS L +SSC
Sbjct: 127 NNHTLTGHEAPILTVAFDPTDSYLVSSSC 155