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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK959142
Clone id TST39A01NGRL0003_O05
Library
Length 434
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_O05. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
GGTACATTGGAGAGGTCCATTGCAACTCGGTAGTGTGAAACCTACCTCACATAGTATAAT
TCGTAAAGTGGCCGAGCTGAATGTACACCATGATACAGACTCCGACAGAACAGCCAAGAG
CTGTCCTAAGGAGGAGAACATCCAGGAAAGTGTCTCTACCTCTTACAAGCAACAGGAGAA
GGTGTCATAAGACGAATGCCAGGGAAAATGTCTCTGATGAGAAAGAGTCCAGCAGCAAAG
CTAAGACAGCTGAAGTGACTTCTGGGCGGGGATCAAAACGAGCCATAAATCAGATTATGA
GGTGAGAGTCGCACACTAATGCTGAGAAAGACTGACGCGTCATGAAAGGCAATATGCTAC
AATAAGGCCCTTCTATAACGCATATATTGCAACGTGATAGTATTGCACCAAACTATTGCT
GTCTGATCTGCGTG
■■Homology search results ■■ -
sp_hit_id Q9UIL4
Definition sp|Q9UIL4|KIF25_HUMAN Kinesin-like protein KIF25 OS=Homo sapiens
Align length 36
Score (bit) 30.0
E-value 4.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959142|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_O05, 5'
         (434 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9UIL4|KIF25_HUMAN Kinesin-like protein KIF25 OS=Homo sapiens...    30   4.3  
sp|Q7ZX27|PALMD_XENLA Palmdelphin OS=Xenopus laevis GN=palmd PE=...    29   9.6  
sp|Q96JI4|K1843_HUMAN Uncharacterized protein KIAA1843 OS=Homo s...    29   9.6  
sp|P74299|CAPP_SYNY3 Phosphoenolpyruvate carboxylase OS=Synechoc...    29   9.6  

>sp|Q9UIL4|KIF25_HUMAN Kinesin-like protein KIF25 OS=Homo sapiens
           GN=KIF25 PE=2 SV=2
          Length = 384

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -2

Query: 148 FLDVLLLRTALGCSVGVCIMVYIQLGHFTNYTM*GR 41
           F DV  L T+L     VC+M Y Q G   +YTM GR
Sbjct: 43  FGDVCPLLTSLLDGYNVCVMAYGQTGSGKSYTMLGR 78


>sp|Q7ZX27|PALMD_XENLA Palmdelphin OS=Xenopus laevis GN=palmd PE=2
           SV=1
          Length = 535

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 24/49 (48%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
 Frame = +2

Query: 29  GSVKPTS--HSIIRKVAELNVHHDTDSDRTAKSCPK--EENIQESVSTS 163
           G VKP S    IIR  AEL V  D D D   +   K  EEN +ESVS S
Sbjct: 406 GDVKPISDYEGIIR--AELVVIDDDDDDDDDEEADKKGEENTKESVSVS 452


>sp|Q96JI4|K1843_HUMAN Uncharacterized protein KIAA1843 OS=Homo
            sapiens GN=KIAA1843 PE=2 SV=3
          Length = 2181

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +2

Query: 74   ELNVHHDTDSDRTAKSCPKEENIQESVSTSYKQQEK 181
            +L VH DT  +   K C +  NI ES ST Y   +K
Sbjct: 1172 QLPVHEDTQFEALLKECLEFFNIPESQSTHYFLMDK 1207


>sp|P74299|CAPP_SYNY3 Phosphoenolpyruvate carboxylase
           OS=Synechocystis sp. (strain PCC 6803) GN=ppc PE=3 SV=1
          Length = 1034

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -3

Query: 132 SLGQLLAVLSESVSWCTFSSATL 64
           SLG+L+A+LS S+ WC  S   L
Sbjct: 355 SLGELVAILSPSLHWCKVSQELL 377
tr_hit_id Q89BV5
Definition tr|Q89BV5|Q89BV5_BRAJA Bll8043 protein OS=Bradyrhizobium japonicum
Align length 76
Score (bit) 35.0
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959142|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_O05, 5'
         (434 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q89BV5|Q89BV5_BRAJA Bll8043 protein OS=Bradyrhizobium japonic...    35   1.9  
tr|B6QPB9|B6QPB9_PENMA Mitochondrial serine protease Pim1, putat...    35   2.4  
tr|B6QPB8|B6QPB8_PENMA Mitochondrial serine protease Pim1, putat...    35   2.4  
tr|A8XLP8|A8XLP8_CAEBR Putative uncharacterized protein OS=Caeno...    34   4.2  
tr|Q17HB5|Q17HB5_AEDAE Homeobox protein otx OS=Aedes aegypti GN=...    33   5.4  
tr|B3N0K7|B3N0K7_DROAN GF21867 OS=Drosophila ananassae GN=GF2186...    33   7.1  

>tr|Q89BV5|Q89BV5_BRAJA Bll8043 protein OS=Bradyrhizobium japonicum
           GN=bll8043 PE=4 SV=1
          Length = 154

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
 Frame = -2

Query: 412 FGAILSRCNICVIEGPYCSILPFMTRQSFSALVCDSHLII*FMARFDP---------RPE 260
           F A L  C  C    P  S+ P +   SF  L+ D H ++ F+A F P          PE
Sbjct: 65  FTANLQSC--CAQPAPVSSV-PIVAPSSFRGLLLDPHALVFFLAAFLPFAGFLTPMNSPE 121

Query: 259 VTSAVLALLLDSFSSE 212
               +LALLLD+ + +
Sbjct: 122 ALLRLLALLLDALAGQ 137


>tr|B6QPB9|B6QPB9_PENMA Mitochondrial serine protease Pim1, putative
           OS=Penicillium marneffei ATCC 18224 GN=PMAA_049380 PE=4
           SV=1
          Length = 1072

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
 Frame = +3

Query: 72  PS*MYTMIQTPTEQPRAVLRRRTSRKVSLPLTSNR-RRCHKTNARENVSDEKESSSKAKT 248
           PS    +  TPT   RA    RTS K   P + +        +  E     K+  S+ K+
Sbjct: 38  PSTRTPIFPTPTIASRAFTSSRTSYKEKAPPSEDAPENAENNDGAEGKDTTKQVDSRRKS 97

Query: 249 AEVTSGRGSKRAINQIMR*ESHTNAEKD 332
            + T  +GS +  +   R    +NAEK+
Sbjct: 98  GDATDKQGSTQTTDTPSRRRDKSNAEKE 125


>tr|B6QPB8|B6QPB8_PENMA Mitochondrial serine protease Pim1, putative
           OS=Penicillium marneffei ATCC 18224 GN=PMAA_049380 PE=4
           SV=1
          Length = 1116

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
 Frame = +3

Query: 72  PS*MYTMIQTPTEQPRAVLRRRTSRKVSLPLTSNR-RRCHKTNARENVSDEKESSSKAKT 248
           PS    +  TPT   RA    RTS K   P + +        +  E     K+  S+ K+
Sbjct: 38  PSTRTPIFPTPTIASRAFTSSRTSYKEKAPPSEDAPENAENNDGAEGKDTTKQVDSRRKS 97

Query: 249 AEVTSGRGSKRAINQIMR*ESHTNAEKD 332
            + T  +GS +  +   R    +NAEK+
Sbjct: 98  GDATDKQGSTQTTDTPSRRRDKSNAEKE 125


>tr|A8XLP8|A8XLP8_CAEBR Putative uncharacterized protein
           OS=Caenorhabditis briggsae GN=CBG15198 PE=4 SV=2
          Length = 168

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = +3

Query: 126 LRRRTSRKVSLPLTSNRRRCHKTNARENVSDEKESSSKAKTAEVTSGR--GSKRAIN 290
           +RR   + VS  L +NR R  K  +RE+ S E  S  K + AE+ S R  GSKR  N
Sbjct: 48  MRRENKKSVSKMLLTNRERMAKCYSRES-SSEHSSLEKLQPAEMHSRRATGSKRRSN 103


>tr|Q17HB5|Q17HB5_AEDAE Homeobox protein otx OS=Aedes aegypti
           GN=AAEL002740 PE=3 SV=1
          Length = 413

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 12/76 (15%)
 Frame = +3

Query: 99  TPTEQPRAVLRRRTSRKVSLP-------LTSNRRRC-----HKTNARENVSDEKESSSKA 242
           T T  P   +R   + K++LP         + R +C     H+T++  N S    SSS +
Sbjct: 62  TKTRYPDIFMREEVAMKINLPESRVQVWFKNRRAKCRQQLQHQTSSNLNSSKTSSSSSSS 121

Query: 243 KTAEVTSGRGSKRAIN 290
            T +  +G GS  + N
Sbjct: 122 STRQSNAGTGSSSSSN 137


>tr|B3N0K7|B3N0K7_DROAN GF21867 OS=Drosophila ananassae GN=GF21867
           PE=4 SV=1
          Length = 523

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 16/66 (24%), Positives = 31/66 (46%)
 Frame = +3

Query: 96  QTPTEQPRAVLRRRTSRKVSLPLTSNRRRCHKTNARENVSDEKESSSKAKTAEVTSGRGS 275
           +T  E    ++      K+   L  N     K N++EN  D  + ++K   A +TS + S
Sbjct: 404 ETIPENAERIMDENFKEKLEKLLEENTNTLSKENSKENTKDNTKDNAKESEAVITSKQAS 463

Query: 276 KRAINQ 293
           ++A ++
Sbjct: 464 EKAASE 469