DK959101 |
Clone id |
TST39A01NGRL0003_M10 |
Library |
TST39 |
Length |
684 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_M10. 5' end sequence. |
Accession |
DK959101 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3467Contig1 |
Sequence |
ATGTTCCCTCCAAAACAGTAGCACTGATCGTTTGTGCGCGCGATTTCTTGGTGGTTCACT CCTTGCAGGAAGGACATTTGCGCAAGCTTCTACTCCACAGTTGCACCCGATGCCGTTCCA GCTGGCTCCGTATGGGGTGCAGACCATGCTCAAGGAGGGCCACAAGCATCTCTCCGGCCT GGACGAAGCAGTCTTGAAGAACATCGATGCCTGCAAGGAGCTCTCACAGATCACCCGCTC TTCTCTGGGGCCCAACGGAATGAATAAAATGGTAATCAACCACCTCGACAAACTGTTTGT GACAAATGATGCGGCCACAATTGTGAACGAGCTGGAGGTGCAGCATCCTGCTGCAAAACT TTTGGTTCTTGCTGGAAAGGCACAACAAGAAGAGATTGGAGATGGTGCAAATCTGGTCAT CTCTTTTGCTGGAGAACTTTTACAAGGAGCAGAGGAGCTTATAAGGCTTGGGCTGCACCC AAGTGAAATAATCAGAGGCTACTCAAAAGCCCTTACTAAAGTCATTGAGCTTCTTGAAAA GATTGTAGAGCCAGGTTCTGATAAAATGGATGTCAGAAACAAGGAGCAGGTAGTTAAAAG GATAGTCTCTGCGGTTGGTAGCAAGCAGTGGGGTCAGGAAGGTGTTTTGTGTCCACTAAT TGCAGATGCGTGCATACAAGTGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q552J0 |
Definition |
sp|Q552J0|TCPQ_DICDI T-complex protein 1 subunit theta OS=Dictyostelium discoideum |
Align length |
183 |
Score (bit) |
209.0 |
E-value |
1.0e-53 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PW56 |
Definition |
tr|A7PW56|A7PW56_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
191 |
Score (bit) |
320.0 |
E-value |
4.0e-86 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959101|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_M10, 5' (684 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PW56|A7PW56_VITVI Chromosome chr8 scaffold_34, whole genome... 320 4e-86 tr|A9PG05|A9PG05_POPTR Putative uncharacterized protein OS=Popul... 314 3e-84 tr|A9NV11|A9NV11_PICSI Putative uncharacterized protein OS=Picea... 311 2e-83 tr|A9P9J0|A9P9J0_POPTR Putative uncharacterized protein OS=Popul... 310 4e-83 tr|Q75HJ3|Q75HJ3_ORYSJ Os03g0804800 protein OS=Oryza sativa subs... 304 4e-81 tr|B8ALS4|B8ALS4_ORYSI Putative uncharacterized protein OS=Oryza... 304 4e-81 tr|A3ANT1|A3ANT1_ORYSJ Putative uncharacterized protein OS=Oryza... 304 4e-81 tr|B7FLW6|B7FLW6_MEDTR Putative uncharacterized protein OS=Medic... 303 9e-81 tr|Q9SQR6|Q9SQR6_ARATH Putative T-complex protein 1, theta subun... 301 3e-80 tr|Q94K05|Q94K05_ARATH Putative T-complex protein 1, theta subun... 301 3e-80 tr|A9U1I5|A9U1I5_PHYPA Predicted protein OS=Physcomitrella paten... 281 4e-74 tr|A8IF08|A8IF08_CHLRE T-complex protein, theta subunit OS=Chlam... 240 5e-62 tr|A4RUN3|A4RUN3_OSTLU Predicted protein OS=Ostreococcus lucimar... 235 2e-60 tr|Q4Q063|Q4Q063_LEIMA Chaperonin, putative (T-complex protein 1... 210 8e-53 tr|Q7ZTL5|Q7ZTL5_XENLA Cct8-prov protein OS=Xenopus laevis GN=cc... 209 2e-52 tr|A4ICD2|A4ICD2_LEIIN Chaperonin, putative (T-complex protein 1... 209 2e-52 tr|A7SBU6|A7SBU6_NEMVE Predicted protein OS=Nematostella vectens... 208 2e-52 tr|Q4QR49|Q4QR49_XENLA Putative uncharacterized protein OS=Xenop... 207 5e-52 tr|A4HQL2|A4HQL2_LEIBR Chaperonin, putative (T-complex protein 1... 207 5e-52 tr|Q68ER1|Q68ER1_XENTR Cct8 protein OS=Xenopus tropicalis GN=cct... 207 7e-52 tr|Q28EG6|Q28EG6_XENTR Chaperonin containing TCP1, subunit 8 (Th... 207 7e-52 tr|Q01CF1|Q01CF1_OSTTA Putative TCP-1/cpn60 chaperonin family pr... 206 9e-52 tr|Q9XZD7|Q9XZD7_TETPY Chaperonin-containing-TCP1 theta subunit ... 204 3e-51 tr|Q7ZU96|Q7ZU96_DANRE Chaperonin containing TCP1, subunit 8 (Th... 204 4e-51 tr|Q6TNV4|Q6TNV4_DANRE Chaperonin containing TCP1, subunit 8 (Th... 204 4e-51 tr|Q22MB3|Q22MB3_TETTH TCP-1/cpn60 chaperonin family protein OS=... 204 6e-51 tr|Q5DW61|Q5DW61_ONCMY Chaperonin containing TCP1 subunit 8 OS=O... 202 2e-50 tr|B5X4M2|B5X4M2_SALSA T-complex protein 1 subunit theta OS=Salm... 202 2e-50 tr|Q4SFT9|Q4SFT9_TETNG Chromosome 7 SCAF14601, whole genome shot... 202 2e-50 tr|B3RYD2|B3RYD2_TRIAD Putative uncharacterized protein OS=Trich... 202 2e-50
>tr|A7PW56|A7PW56_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025480001 PE=3 SV=1 Length = 545
Score = 320 bits (821), Expect = 4e-86 Identities = 158/191 (82%), Positives = 177/191 (92%) Frame = +2
Query: 110 MPFQLAPYGVQTMLKEGHKHLSGLDEAVLKNIDACKELSQITRSSLGPNGMNKMVINHLD 289 M FQ+ PYGVQ+MLKEGHKHLSGL+EAVLKNIDACK+LS ITR+SLGPNGMNKMVINHLD Sbjct: 1 MGFQMQPYGVQSMLKEGHKHLSGLEEAVLKNIDACKQLSVITRTSLGPNGMNKMVINHLD 60
Query: 290 KLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLVISFAGELLQGAEELIRL 469 K+FVTNDAATIVNELEVQHPAAK+LVLA KAQQEEIGDGANL ISFAGELLQ AEELIR+ Sbjct: 61 KIFVTNDAATIVNELEVQHPAAKILVLASKAQQEEIGDGANLTISFAGELLQNAEELIRM 120
Query: 470 GLHPSEIIRGYSKALTKVIELLEKIVEPGSDKMDVRNKEQVVKRIVSAVGSKQWGQEGVL 649 GLHPSEII GYSKA+ K +E+LE++VE GS+KMDVRNKEQV+ R+ +AV SKQ+GQE +L Sbjct: 121 GLHPSEIISGYSKAINKTVEILEELVEKGSEKMDVRNKEQVISRMKAAVASKQFGQEDIL 180
Query: 650 CPLIADACIQV 682 CPLIADACIQV Sbjct: 181 CPLIADACIQV 191
>tr|A9PG05|A9PG05_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 545
Score = 314 bits (805), Expect = 3e-84 Identities = 155/191 (81%), Positives = 175/191 (91%) Frame = +2
Query: 110 MPFQLAPYGVQTMLKEGHKHLSGLDEAVLKNIDACKELSQITRSSLGPNGMNKMVINHLD 289 M F + PYG+Q+MLKEGHKHLSGLDEAVLKNIDACK+LS ITR+SLGPNGMNKMVINHLD Sbjct: 1 MGFSMQPYGMQSMLKEGHKHLSGLDEAVLKNIDACKQLSAITRTSLGPNGMNKMVINHLD 60
Query: 290 KLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLVISFAGELLQGAEELIRL 469 KLFVTNDAATIVNELEVQHPAAK+LVLAGKAQQEEIGDGANL ISFAGE+LQ A+ELIR+ Sbjct: 61 KLFVTNDAATIVNELEVQHPAAKILVLAGKAQQEEIGDGANLTISFAGEMLQNADELIRM 120
Query: 470 GLHPSEIIRGYSKALTKVIELLEKIVEPGSDKMDVRNKEQVVKRIVSAVGSKQWGQEGVL 649 GLHPSEII GY+KA+ K IE+L ++VEPGS+ MDVRNKEQV+ R+ +AV SKQ+GQE +L Sbjct: 121 GLHPSEIISGYNKAINKAIEILSELVEPGSENMDVRNKEQVICRMKAAVASKQFGQEDIL 180
Query: 650 CPLIADACIQV 682 C LIADACIQV Sbjct: 181 CNLIADACIQV 191
>tr|A9NV11|A9NV11_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 544
Score = 311 bits (798), Expect = 2e-83 Identities = 157/191 (82%), Positives = 174/191 (91%) Frame = +2
Query: 110 MPFQLAPYGVQTMLKEGHKHLSGLDEAVLKNIDACKELSQITRSSLGPNGMNKMVINHLD 289 M FQ+ P G+Q+MLKEGHK LSGLDEAVLKNIDACK+LSQITR+SLGPNGMNKMVINHLD Sbjct: 1 MGFQIQPQGLQSMLKEGHKLLSGLDEAVLKNIDACKQLSQITRTSLGPNGMNKMVINHLD 60
Query: 290 KLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLVISFAGELLQGAEELIRL 469 KLFVTNDAATIVNELEVQHPAAKLLVLA KAQQEEIGDGANL ISFAGELLQGAEELIR Sbjct: 61 KLFVTNDAATIVNELEVQHPAAKLLVLAAKAQQEEIGDGANLTISFAGELLQGAEELIRT 120
Query: 470 GLHPSEIIRGYSKALTKVIELLEKIVEPGSDKMDVRNKEQVVKRIVSAVGSKQWGQEGVL 649 GLHPSEII GY+KA+ K IELL+++VE GS+ MDV+NKEQV+ R+ + V SKQ+GQE +L Sbjct: 121 GLHPSEIISGYTKAINKAIELLDELVEVGSETMDVKNKEQVILRMKAPVASKQFGQESIL 180
Query: 650 CPLIADACIQV 682 CPLIADACIQV Sbjct: 181 CPLIADACIQV 191
>tr|A9P9J0|A9P9J0_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 545
Score = 310 bits (795), Expect = 4e-83 Identities = 153/191 (80%), Positives = 175/191 (91%) Frame = +2
Query: 110 MPFQLAPYGVQTMLKEGHKHLSGLDEAVLKNIDACKELSQITRSSLGPNGMNKMVINHLD 289 M F + PYG+Q+MLKEGHKHLSGLDEAVLKNIDACK+LS ITR+SLGPNGMNKMVINHLD Sbjct: 1 MGFSMQPYGIQSMLKEGHKHLSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLD 60
Query: 290 KLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLVISFAGELLQGAEELIRL 469 KLFVTNDAATIVNELEVQHPAAK+LVLAGKAQQEEIGDGANL ISFAGE+LQ A+ELIR+ Sbjct: 61 KLFVTNDAATIVNELEVQHPAAKILVLAGKAQQEEIGDGANLTISFAGEILQNADELIRM 120
Query: 470 GLHPSEIIRGYSKALTKVIELLEKIVEPGSDKMDVRNKEQVVKRIVSAVGSKQWGQEGVL 649 GLHPSEII GY+K++ K IE+L ++VEPGS+ MDVRNKEQV+ R+ +AV SKQ+GQE VL Sbjct: 121 GLHPSEIISGYNKSIDKAIEILGELVEPGSENMDVRNKEQVIFRMKAAVASKQFGQEDVL 180
Query: 650 CPLIADACIQV 682 C LI++ACIQV Sbjct: 181 CNLISEACIQV 191
>tr|Q75HJ3|Q75HJ3_ORYSJ Os03g0804800 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0015I02.11 PE=3 SV=1 Length = 546
Score = 304 bits (778), Expect = 4e-81 Identities = 150/184 (81%), Positives = 170/184 (92%) Frame = +2
Query: 131 YGVQTMLKEGHKHLSGLDEAVLKNIDACKELSQITRSSLGPNGMNKMVINHLDKLFVTND 310 YG+Q+MLKEGHKHLSGLDEAVLKNIDAC+ELS ITR+SLGPNGMNKMVINHLDKLFVTND Sbjct: 10 YGIQSMLKEGHKHLSGLDEAVLKNIDACRELSAITRTSLGPNGMNKMVINHLDKLFVTND 69
Query: 311 AATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLVISFAGELLQGAEELIRLGLHPSEI 490 AATIVNELEVQHPAAK+LVLAG+AQQEEIGDGANL ISFAGELL+ AEELIR+GLHPSEI Sbjct: 70 AATIVNELEVQHPAAKILVLAGRAQQEEIGDGANLTISFAGELLEKAEELIRMGLHPSEI 129
Query: 491 IRGYSKALTKVIELLEKIVEPGSDKMDVRNKEQVVKRIVSAVGSKQWGQEGVLCPLIADA 670 I GY+KA+ K +E+LE +VE GS+ MDVRNKE+VV + SAV SKQ+GQE +LCPL+ADA Sbjct: 130 IIGYTKAINKTVEILEDLVEKGSENMDVRNKEEVVLLMRSAVASKQFGQEDILCPLVADA 189
Query: 671 CIQV 682 C+QV Sbjct: 190 CMQV 193
>tr|B8ALS4|B8ALS4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13967 PE=4 SV=1 Length = 546
Score = 304 bits (778), Expect = 4e-81 Identities = 150/184 (81%), Positives = 170/184 (92%) Frame = +2
Query: 131 YGVQTMLKEGHKHLSGLDEAVLKNIDACKELSQITRSSLGPNGMNKMVINHLDKLFVTND 310 YG+Q+MLKEGHKHLSGLDEAVLKNIDAC+ELS ITR+SLGPNGMNKMVINHLDKLFVTND Sbjct: 10 YGIQSMLKEGHKHLSGLDEAVLKNIDACRELSAITRTSLGPNGMNKMVINHLDKLFVTND 69
Query: 311 AATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLVISFAGELLQGAEELIRLGLHPSEI 490 AATIVNELEVQHPAAK+LVLAG+AQQEEIGDGANL ISFAGELL+ AEELIR+GLHPSEI Sbjct: 70 AATIVNELEVQHPAAKILVLAGRAQQEEIGDGANLTISFAGELLEKAEELIRMGLHPSEI 129
Query: 491 IRGYSKALTKVIELLEKIVEPGSDKMDVRNKEQVVKRIVSAVGSKQWGQEGVLCPLIADA 670 I GY+KA+ K +E+LE +VE GS+ MDVRNKE+VV + SAV SKQ+GQE +LCPL+ADA Sbjct: 130 IIGYTKAINKTVEILEDLVEKGSENMDVRNKEEVVLLMRSAVASKQFGQEDILCPLVADA 189
Query: 671 CIQV 682 C+QV Sbjct: 190 CMQV 193
>tr|A3ANT1|A3ANT1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_012453 PE=3 SV=1 Length = 540
Score = 304 bits (778), Expect = 4e-81 Identities = 150/184 (81%), Positives = 170/184 (92%) Frame = +2
Query: 131 YGVQTMLKEGHKHLSGLDEAVLKNIDACKELSQITRSSLGPNGMNKMVINHLDKLFVTND 310 YG+Q+MLKEGHKHLSGLDEAVLKNIDAC+ELS ITR+SLGPNGMNKMVINHLDKLFVTND Sbjct: 4 YGIQSMLKEGHKHLSGLDEAVLKNIDACRELSAITRTSLGPNGMNKMVINHLDKLFVTND 63
Query: 311 AATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLVISFAGELLQGAEELIRLGLHPSEI 490 AATIVNELEVQHPAAK+LVLAG+AQQEEIGDGANL ISFAGELL+ AEELIR+GLHPSEI Sbjct: 64 AATIVNELEVQHPAAKILVLAGRAQQEEIGDGANLTISFAGELLEKAEELIRMGLHPSEI 123
Query: 491 IRGYSKALTKVIELLEKIVEPGSDKMDVRNKEQVVKRIVSAVGSKQWGQEGVLCPLIADA 670 I GY+KA+ K +E+LE +VE GS+ MDVRNKE+VV + SAV SKQ+GQE +LCPL+ADA Sbjct: 124 IIGYTKAINKTVEILEDLVEKGSENMDVRNKEEVVLLMRSAVASKQFGQEDILCPLVADA 183
Query: 671 CIQV 682 C+QV Sbjct: 184 CMQV 187
>tr|B7FLW6|B7FLW6_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 540
Score = 303 bits (775), Expect = 9e-81 Identities = 150/184 (81%), Positives = 169/184 (91%) Frame = +2
Query: 131 YGVQTMLKEGHKHLSGLDEAVLKNIDACKELSQITRSSLGPNGMNKMVINHLDKLFVTND 310 YG+Q+MLKEGHKHLSGLDEAVLKNIDACK+LS ITR+SLGPNGMNKMVINHLDKLFVTND Sbjct: 3 YGMQSMLKEGHKHLSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTND 62
Query: 311 AATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLVISFAGELLQGAEELIRLGLHPSEI 490 AATIVNELEVQHPAAK+LVLA KAQQEEIGDGANL ISFAGELLQGAEELIR+GLHPSEI Sbjct: 63 AATIVNELEVQHPAAKILVLASKAQQEEIGDGANLTISFAGELLQGAEELIRMGLHPSEI 122
Query: 491 IRGYSKALTKVIELLEKIVEPGSDKMDVRNKEQVVKRIVSAVGSKQWGQEGVLCPLIADA 670 I GY+KA+ K +E+L+++VE GS+ MDVR+KEQV+ R+ +AV SKQ+GQE LC LIAD Sbjct: 123 IIGYTKAINKTVEILDELVEEGSENMDVRDKEQVISRMRAAVASKQFGQEDTLCSLIADV 182
Query: 671 CIQV 682 CIQV Sbjct: 183 CIQV 186
>tr|Q9SQR6|Q9SQR6_ARATH Putative T-complex protein 1, theta subunit (TCP-1-Theta) OS=Arabidopsis thaliana GN=T11I18.7 PE=3 SV=1 Length = 528
Score = 301 bits (770), Expect = 3e-80 Identities = 145/187 (77%), Positives = 172/187 (91%) Frame = +2
Query: 122 LAPYGVQTMLKEGHKHLSGLDEAVLKNIDACKELSQITRSSLGPNGMNKMVINHLDKLFV 301 + PYG+Q+MLKEG++HLSGLDEAV+KNI+ACKELS ITR+SLGPNGMNKMVINHLDKLFV Sbjct: 6 MQPYGIQSMLKEGYRHLSGLDEAVIKNIEACKELSTITRTSLGPNGMNKMVINHLDKLFV 65
Query: 302 TNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLVISFAGELLQGAEELIRLGLHP 481 TNDAATIVNELE+QHPAAKLLVLA KAQQEEIGDGANL ISFAGELLQ AEELIR+GLHP Sbjct: 66 TNDAATIVNELEIQHPAAKLLVLAAKAQQEEIGDGANLTISFAGELLQNAEELIRMGLHP 125
Query: 482 SEIIRGYSKALTKVIELLEKIVEPGSDKMDVRNKEQVVKRIVSAVGSKQWGQEGVLCPLI 661 SEII GY+KA++K +E+LE++VE GS+ MDVRNK++V+ R+ +AV SKQ+GQE ++C L+ Sbjct: 126 SEIISGYTKAVSKAVEILEQLVETGSETMDVRNKDEVISRMRAAVASKQFGQEEIICSLV 185
Query: 662 ADACIQV 682 DACIQV Sbjct: 186 TDACIQV 192
>tr|Q94K05|Q94K05_ARATH Putative T-complex protein 1, theta subunit; TCP-1-Theta (At3g03960) OS=Arabidopsis thaliana GN=At3g03960 PE=2 SV=1 Length = 549
Score = 301 bits (770), Expect = 3e-80 Identities = 145/187 (77%), Positives = 172/187 (91%) Frame = +2
Query: 122 LAPYGVQTMLKEGHKHLSGLDEAVLKNIDACKELSQITRSSLGPNGMNKMVINHLDKLFV 301 + PYG+Q+MLKEG++HLSGLDEAV+KNI+ACKELS ITR+SLGPNGMNKMVINHLDKLFV Sbjct: 6 MQPYGIQSMLKEGYRHLSGLDEAVIKNIEACKELSTITRTSLGPNGMNKMVINHLDKLFV 65
Query: 302 TNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLVISFAGELLQGAEELIRLGLHP 481 TNDAATIVNELE+QHPAAKLLVLA KAQQEEIGDGANL ISFAGELLQ AEELIR+GLHP Sbjct: 66 TNDAATIVNELEIQHPAAKLLVLAAKAQQEEIGDGANLTISFAGELLQNAEELIRMGLHP 125
Query: 482 SEIIRGYSKALTKVIELLEKIVEPGSDKMDVRNKEQVVKRIVSAVGSKQWGQEGVLCPLI 661 SEII GY+KA++K +E+LE++VE GS+ MDVRNK++V+ R+ +AV SKQ+GQE ++C L+ Sbjct: 126 SEIISGYTKAVSKAVEILEQLVETGSETMDVRNKDEVISRMRAAVASKQFGQEEIICSLV 185
Query: 662 ADACIQV 682 DACIQV Sbjct: 186 TDACIQV 192
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