DK959100
Clone id TST39A01NGRL0003_M09
Library
Length 663
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_M09. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
TCGACAATGTGCGAGTGTCTGCGCAGGGGCACAAAATTTGAACCTGGACGAGCCAAGAGA
GCTTCCCGCAGAGCTTAGCAGACGTCTTTCTGTGTGTCTCCGAGAAGCGTCGTTTACGCC
GCAGCTTTCCTAGGGCTGGAGGATCGTCATGGAGACTGCGAGCGCCCACCATCGCTGTCT
CCAGGAGTCCTTCCGCTTCTCGTCGGACTCGCTCTTCCCCTTTCGGCGTAAGCATTCTCA
CCATCGTCAATGTTTCAGTCTCCTTGCCTTCAGGTCCCATTCGACTTCATACCTACACAC
GCAGGCTCCCTTCAGCAGCAATGCAAATCTTGCTGCTTCCATTAGGCCTGGGTGTAGGAA
ACGAGGTCTGTCATGCTCAGGTTCAGAGAAGGCAGAAACAGACCAGGTTGCTTCAAATGG
TCTTACTGAGCTACCCCTCTTTCCTCTGCCCCTCATTCTCTTTCCAGGTACCATAGCTCC
TCTTCAGATATTTGAATATCGGTACCGCATGATGATGCACACTCTGCTGCAGACGGATTT
ACGGTTTGGGCTCATCTATGCGGATCCAAAAACCTCAAGCTTGGCAGAAGTTGGATGTGT
TGCAGAGGTCATAAAGCATGAGAGGCTGGTCGATGATCGCTTTTTCATCATCTGCAAAGG
GCA
■■Homology search results ■■ -
sp_hit_id Q8HXH0
Definition sp|Q8HXH0|LONF3_MACFA LON peptidase N-terminal domain and RING finger protein 3 OS=Macaca fascicularis
Align length 55
Score (bit) 38.1
E-value 0.042
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959100|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_M09, 5'
(663 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8HXH0|LONF3_MACFA LON peptidase N-terminal domain and RING f... 38 0.042
sp|Q496Y0|LONF3_HUMAN LON peptidase N-terminal domain and RING f... 38 0.042
sp|Q17RB8|LONF1_HUMAN LON peptidase N-terminal domain and RING f... 37 0.093
sp|Q9D4H7|LONF3_MOUSE LON peptidase N-terminal domain and RING f... 36 0.21
sp|Q1L5Z9|LONF2_HUMAN LON peptidase N-terminal domain and RING f... 34 0.60
sp|Q86V15|CASZ1_HUMAN Zinc finger protein castor homolog 1 OS=Ho... 32 3.9

>sp|Q8HXH0|LONF3_MACFA LON peptidase N-terminal domain and RING
finger protein 3 OS=Macaca fascicularis GN=LONRF3 PE=2
SV=1
Length = 718

Score = 38.1 bits (87), Expect = 0.042
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2

Query: 479 PLQIFEYRYRMMMHTLLQTDLR-FGLIYADPKTSSLAEVGCVAEVIKHERLVDDR 640
PL IFE YR+M+ ++T R FG+ DP AE GC+ E+ + D R
Sbjct: 530 PLHIFEPCYRLMIRRCIETGTRQFGMCLGDP-VKGFAEYGCILEIRNVQFFADGR 583


>sp|Q496Y0|LONF3_HUMAN LON peptidase N-terminal domain and RING
finger protein 3 OS=Homo sapiens GN=LONRF3 PE=2 SV=1
Length = 759

Score = 38.1 bits (87), Expect = 0.042
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2

Query: 479 PLQIFEYRYRMMMHTLLQTDLR-FGLIYADPKTSSLAEVGCVAEVIKHERLVDDR 640
PL IFE YR+M+ ++T R FG+ DP AE GC+ E+ + D R
Sbjct: 571 PLHIFEPCYRLMIRRCIETGTRQFGMCLGDP-VKGFAEYGCILEIRNVQFFADGR 624


>sp|Q17RB8|LONF1_HUMAN LON peptidase N-terminal domain and RING
finger protein 1 OS=Homo sapiens GN=LONRF1 PE=2 SV=1
Length = 416

Score = 37.0 bits (84), Expect = 0.093
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2

Query: 479 PLQIFEYRYRMMMHTLLQTDLR-FGLIYADPKTSSLAEVGCVAEVIKHERLVDDR 640
PL +FE RYR+M+ +QT + FG+ +D + +S A+ GC+ ++ L D R
Sbjct: 226 PLHVFEPRYRLMIRRSIQTGTKQFGMCVSDTQ-NSFADYGCMLQIRNVHFLPDGR 279


>sp|Q9D4H7|LONF3_MOUSE LON peptidase N-terminal domain and RING
finger protein 3 OS=Mus musculus GN=Lonrf3 PE=2 SV=1
Length = 753

Score = 35.8 bits (81), Expect = 0.21
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2

Query: 479 PLQIFEYRYRMMMHTLLQTDLR-FGLIYADPKTSSLAEVGCVAEVIKHERLVDDR 640
PL IFE YR+M+ ++T R FG+ DP E GC+ E+ + D R
Sbjct: 565 PLHIFEPCYRLMIRRCIETGTRQFGMCLGDP-VKGFVEYGCILEIRNVQFFSDGR 618


>sp|Q1L5Z9|LONF2_HUMAN LON peptidase N-terminal domain and RING
finger protein 2 OS=Homo sapiens GN=LONRF2 PE=2 SV=2
Length = 754

Score = 34.3 bits (77), Expect = 0.60
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +2

Query: 479 PLQIFEYRYRMMMHTLLQTDL-RFGLIYADPKTSSLAEVGCVAEV 610
PL +FE RYR+M+ ++T RFG+ + + + L+E GC+ E+
Sbjct: 553 PLHVFEPRYRLMIRRCMETGTKRFGMCLS-AEHAGLSEYGCMLEI 596


>sp|Q86V15|CASZ1_HUMAN Zinc finger protein castor homolog 1 OS=Homo
sapiens GN=CASZ1 PE=2 SV=3
Length = 1759

Score = 31.6 bits (70), Expect = 3.9
Identities = 31/115 (26%), Positives = 42/115 (36%)
Frame = +2

Query: 35 NLNLDEPRELPAELSRRLSVCLREASFTPQLS*GWRIVMETASAHHRCLQESFRFSSDSL 214
NL LD+ + A LSR + C S H CL+ FR + +
Sbjct: 1486 NLVLDDFKRFKASLSRHFADC----------------PFSGTSTHFHCLRCRFRCTDSTK 1529

Query: 215 FPFRRKHSHHRQCFSLLAFRSHSTSYLHTQAPFSSNANLAASIRPGCRKRGLSCS 379
RKH + S FR FSS+A+ A P C+ + L CS
Sbjct: 1530 VTAHRKHHGKQDVISAAGFRQ-----------FSSSADCAV---PDCKYK-LKCS 1569


tr_hit_id A7NT45
Definition tr|A7NT45|A7NT45_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera
Align length 105
Score (bit) 106.0
E-value 1.0e-21
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959100|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_M09, 5'
(663 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7NT45|A7NT45_VITVI Chromosome chr18 scaffold_1, whole genome... 106 1e-21
tr|Q9FWT4|Q9FWT4_ARATH F1B16.1 protein (Putative protease) (Prot... 106 1e-21
tr|Q8S9K2|Q8S9K2_ARATH At1g75460/F1B16_22 OS=Arabidopsis thalian... 103 9e-21
tr|Q9FXH3|Q9FXH3_ARATH F6F9.20 protein (Putative uncharacterized... 100 1e-19
tr|Q6Z4A9|Q6Z4A9_ORYSJ Os07g0509700 protein OS=Oryza sativa subs... 95 4e-18
tr|B6SMG8|B6SMG8_MAIZE Peptidase S16, lon OS=Zea mays PE=2 SV=1 95 4e-18
tr|A3BK70|A3BK70_ORYSJ Putative uncharacterized protein OS=Oryza... 95 4e-18
tr|A2YLQ2|A2YLQ2_ORYSI Putative uncharacterized protein OS=Oryza... 95 4e-18
tr|B4FFQ4|B4FFQ4_MAIZE Putative uncharacterized protein OS=Zea m... 93 1e-17
tr|A9RQJ9|A9RQJ9_PHYPA Predicted protein OS=Physcomitrella paten... 82 3e-14
tr|Q55701|Q55701_SYNY3 ATP-dependent proteinase; BsgA OS=Synecho... 78 4e-13
tr|B4WS27|B4WS27_9SYNE ATP-dependent protease La (LON) domain su... 76 2e-12
tr|Q2JTE4|Q2JTE4_SYNJA ATP-dependent protease La domain protein ... 75 3e-12
tr|B0CCC8|B0CCC8_ACAM1 ATP-dependent protease La (LON) domain pr... 75 4e-12
tr|A0YL65|A0YL65_9CYAN Peptidase S16, lon OS=Lyngbya sp. PCC 810... 74 8e-12
tr|Q2JP14|Q2JP14_SYNJB ATP-dependent protease La domain protein ... 74 1e-11
tr|B7K102|B7K102_SYNP8 Peptidase S16 lon domain protein OS=Synec... 73 1e-11
tr|B4C239|B4C239_9CHRO Peptidase S16 lon domain protein OS=Cyano... 73 1e-11
tr|Q8DG63|Q8DG63_THEEB Tlr2461 protein OS=Thermosynechococcus el... 73 2e-11
tr|Q8YP65|Q8YP65_ANASP All4335 protein OS=Anabaena sp. (strain P... 72 2e-11
tr|Q3MDM7|Q3MDM7_ANAVT Peptidase S16, lon OS=Anabaena variabilis... 72 2e-11
tr|B7K832|B7K832_9CHRO Peptidase S16 lon domain protein OS=Cyano... 72 2e-11
tr|B2J5B3|B2J5B3_NOSP7 Peptidase S16, lon domain protein OS=Nost... 72 3e-11
tr|B5W7X9|B5W7X9_SPIMA Peptidase S16 lon domain protein OS=Arthr... 72 3e-11
tr|A0ZFC3|A0ZFC3_NODSP Peptidase S16, lon OS=Nodularia spumigena... 72 3e-11
tr|B4AVR1|B4AVR1_9CHRO Peptidase S16 lon domain protein OS=Cyano... 72 4e-11
tr|B0JWI5|B0JWI5_MICAN Probable ATP-dependent protease OS=Microc... 70 9e-11
tr|A8YC83|A8YC83_MICAE Similar to Nter part of tr|A3IYF2|A3IYF2_... 70 9e-11
tr|A8YAB6|A8YAB6_MICAE Similar to tr|Q4C268|Q4C268_CROWT Peptida... 70 9e-11
tr|Q3AMT8|Q3AMT8_SYNSC Peptidase S16, lon-like OS=Synechococcus ... 70 1e-10

>tr|A7NT45|A7NT45_VITVI Chromosome chr18 scaffold_1, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00014531001
PE=4 SV=1
Length = 284

Score = 106 bits (265), Expect = 1e-21
Identities = 57/105 (54%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
Frame = +2

Query: 356 RKRGLSCSGS---EKAETDQVASNXXXXXXXXXXXXXXXXXXXAPLQIFEYRYRMMMHTL 526
++ L CS S EK T S+ PLQIFE+RYRMMMHTL
Sbjct: 50 KENSLRCSASSFSEKHHTGSPKSDDVVELPLFPLPLVLFPGAILPLQIFEFRYRMMMHTL 109

Query: 527 LQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICKG 661
LQTDLRFG+IY+D T+ A+VGCV EV+KHERLVDDRFF+ICKG
Sbjct: 110 LQTDLRFGVIYSD-ATTGTADVGCVGEVVKHERLVDDRFFLICKG 153


>tr|Q9FWT4|Q9FWT4_ARATH F1B16.1 protein (Putative protease)
(Protease, putative) OS=Arabidopsis thaliana
GN=At1g75460 PE=2 SV=1
Length = 278

Score = 106 bits (264), Expect = 1e-21
Identities = 46/61 (75%), Positives = 56/61 (91%)
Frame = +2

Query: 479 PLQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICK 658
PLQIFE+RYR+MMHTLLQ+DLRFG++Y+D + S AEVGCV EV+KHERLVDDRFF++CK
Sbjct: 88 PLQIFEFRYRIMMHTLLQSDLRFGVVYSDSVSGSAAEVGCVGEVVKHERLVDDRFFLVCK 147

Query: 659 G 661
G
Sbjct: 148 G 148


>tr|Q8S9K2|Q8S9K2_ARATH At1g75460/F1B16_22 OS=Arabidopsis thaliana
PE=2 SV=1
Length = 278

Score = 103 bits (257), Expect = 9e-21
Identities = 45/61 (73%), Positives = 55/61 (90%)
Frame = +2

Query: 479 PLQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICK 658
PLQIFE+RYR+MMHTLL +DLRFG++Y+D + S AEVGCV EV+KHERLVDDRFF++CK
Sbjct: 88 PLQIFEFRYRIMMHTLLLSDLRFGVVYSDSVSGSAAEVGCVGEVVKHERLVDDRFFLVCK 147

Query: 659 G 661
G
Sbjct: 148 G 148


>tr|Q9FXH3|Q9FXH3_ARATH F6F9.20 protein (Putative uncharacterized
protein At1g19740) OS=Arabidopsis thaliana GN=At1g19740
PE=2 SV=1
Length = 278

Score = 100 bits (248), Expect = 1e-19
Identities = 43/61 (70%), Positives = 54/61 (88%)
Frame = +2

Query: 479 PLQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICK 658
PLQIFE+RYR+MM TLLQ+DLRFG++Y+D + S A +GCV E++KHERLVDDRFF+ICK
Sbjct: 88 PLQIFEFRYRVMMQTLLQSDLRFGVVYSDAVSGSAAGIGCVGEIVKHERLVDDRFFLICK 147

Query: 659 G 661
G
Sbjct: 148 G 148


>tr|Q6Z4A9|Q6Z4A9_ORYSJ Os07g0509700 protein OS=Oryza sativa subsp.
japonica GN=P0409B11.11 PE=2 SV=1
Length = 291

Score = 94.7 bits (234), Expect = 4e-18
Identities = 41/60 (68%), Positives = 50/60 (83%)
Frame = +2

Query: 482 LQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICKG 661
L IFE+RYR+MMHT+LQTDLRFG+++A A+VGCV EV+KHERL DDRFF+ICKG
Sbjct: 94 LHIFEFRYRIMMHTVLQTDLRFGVVFAGSGAGGAADVGCVGEVVKHERLADDRFFLICKG 153


>tr|B6SMG8|B6SMG8_MAIZE Peptidase S16, lon OS=Zea mays PE=2 SV=1
Length = 286

Score = 94.7 bits (234), Expect = 4e-18
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +2

Query: 482 LQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICKG 661
L IFEYRYR+MMHT+LQTDLRFG+++ + S AEVGCV EV+KHERL DDRFF+ICKG
Sbjct: 90 LHIFEYRYRIMMHTVLQTDLRFGIVFVG-NSGSAAEVGCVGEVVKHERLADDRFFLICKG 148


>tr|A3BK70|A3BK70_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_023442 PE=4 SV=1
Length = 291

Score = 94.7 bits (234), Expect = 4e-18
Identities = 41/60 (68%), Positives = 50/60 (83%)
Frame = +2

Query: 482 LQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICKG 661
L IFE+RYR+MMHT+LQTDLRFG+++A A+VGCV EV+KHERL DDRFF+ICKG
Sbjct: 94 LHIFEFRYRIMMHTVLQTDLRFGVVFAGSGAGGAADVGCVGEVVKHERLADDRFFLICKG 153


>tr|A2YLQ2|A2YLQ2_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_26152 PE=4 SV=1
Length = 291

Score = 94.7 bits (234), Expect = 4e-18
Identities = 41/60 (68%), Positives = 50/60 (83%)
Frame = +2

Query: 482 LQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICKG 661
L IFE+RYR+MMHT+LQTDLRFG+++A A+VGCV EV+KHERL DDRFF+ICKG
Sbjct: 94 LHIFEFRYRIMMHTVLQTDLRFGVVFAGSGAGGAADVGCVGEVVKHERLADDRFFLICKG 153


>tr|B4FFQ4|B4FFQ4_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 289

Score = 93.2 bits (230), Expect = 1e-17
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +2

Query: 482 LQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICKG 661
L IFE RYR+MMHT+LQTDLRFG+++A + S AEVGCV EV+KHERL DDRFF+ICKG
Sbjct: 93 LHIFELRYRIMMHTVLQTDLRFGIVFAG-NSGSAAEVGCVGEVVKHERLADDRFFLICKG 151


>tr|A9RQJ9|A9RQJ9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_204775 PE=4 SV=1
Length = 181

Score = 82.0 bits (201), Expect = 3e-14
Identities = 37/50 (74%), Positives = 45/50 (90%)
Frame = +2

Query: 512 MMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICKG 661
MMHTLLQTDLRFG+++AD K+ +A VGCV E++KHERLVDDRFF+ICKG
Sbjct: 1 MMHTLLQTDLRFGIVFAD-KSVGVAAVGCVGEIVKHERLVDDRFFMICKG 49