DK959100 |
Clone id |
TST39A01NGRL0003_M09 |
Library |
TST39 |
Length |
663 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_M09. 5' end sequence. |
Accession |
DK959100 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL301Contig1 |
Sequence |
TCGACAATGTGCGAGTGTCTGCGCAGGGGCACAAAATTTGAACCTGGACGAGCCAAGAGA GCTTCCCGCAGAGCTTAGCAGACGTCTTTCTGTGTGTCTCCGAGAAGCGTCGTTTACGCC GCAGCTTTCCTAGGGCTGGAGGATCGTCATGGAGACTGCGAGCGCCCACCATCGCTGTCT CCAGGAGTCCTTCCGCTTCTCGTCGGACTCGCTCTTCCCCTTTCGGCGTAAGCATTCTCA CCATCGTCAATGTTTCAGTCTCCTTGCCTTCAGGTCCCATTCGACTTCATACCTACACAC GCAGGCTCCCTTCAGCAGCAATGCAAATCTTGCTGCTTCCATTAGGCCTGGGTGTAGGAA ACGAGGTCTGTCATGCTCAGGTTCAGAGAAGGCAGAAACAGACCAGGTTGCTTCAAATGG TCTTACTGAGCTACCCCTCTTTCCTCTGCCCCTCATTCTCTTTCCAGGTACCATAGCTCC TCTTCAGATATTTGAATATCGGTACCGCATGATGATGCACACTCTGCTGCAGACGGATTT ACGGTTTGGGCTCATCTATGCGGATCCAAAAACCTCAAGCTTGGCAGAAGTTGGATGTGT TGCAGAGGTCATAAAGCATGAGAGGCTGGTCGATGATCGCTTTTTCATCATCTGCAAAGG GCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8HXH0 |
Definition |
sp|Q8HXH0|LONF3_MACFA LON peptidase N-terminal domain and RING finger protein 3 OS=Macaca fascicularis |
Align length |
55 |
Score (bit) |
38.1 |
E-value |
0.042 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7NT45 |
Definition |
tr|A7NT45|A7NT45_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
105 |
Score (bit) |
106.0 |
E-value |
1.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959100|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_M09, 5' (663 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7NT45|A7NT45_VITVI Chromosome chr18 scaffold_1, whole genome... 106 1e-21 tr|Q9FWT4|Q9FWT4_ARATH F1B16.1 protein (Putative protease) (Prot... 106 1e-21 tr|Q8S9K2|Q8S9K2_ARATH At1g75460/F1B16_22 OS=Arabidopsis thalian... 103 9e-21 tr|Q9FXH3|Q9FXH3_ARATH F6F9.20 protein (Putative uncharacterized... 100 1e-19 tr|Q6Z4A9|Q6Z4A9_ORYSJ Os07g0509700 protein OS=Oryza sativa subs... 95 4e-18 tr|B6SMG8|B6SMG8_MAIZE Peptidase S16, lon OS=Zea mays PE=2 SV=1 95 4e-18 tr|A3BK70|A3BK70_ORYSJ Putative uncharacterized protein OS=Oryza... 95 4e-18 tr|A2YLQ2|A2YLQ2_ORYSI Putative uncharacterized protein OS=Oryza... 95 4e-18 tr|B4FFQ4|B4FFQ4_MAIZE Putative uncharacterized protein OS=Zea m... 93 1e-17 tr|A9RQJ9|A9RQJ9_PHYPA Predicted protein OS=Physcomitrella paten... 82 3e-14 tr|Q55701|Q55701_SYNY3 ATP-dependent proteinase; BsgA OS=Synecho... 78 4e-13 tr|B4WS27|B4WS27_9SYNE ATP-dependent protease La (LON) domain su... 76 2e-12 tr|Q2JTE4|Q2JTE4_SYNJA ATP-dependent protease La domain protein ... 75 3e-12 tr|B0CCC8|B0CCC8_ACAM1 ATP-dependent protease La (LON) domain pr... 75 4e-12 tr|A0YL65|A0YL65_9CYAN Peptidase S16, lon OS=Lyngbya sp. PCC 810... 74 8e-12 tr|Q2JP14|Q2JP14_SYNJB ATP-dependent protease La domain protein ... 74 1e-11 tr|B7K102|B7K102_SYNP8 Peptidase S16 lon domain protein OS=Synec... 73 1e-11 tr|B4C239|B4C239_9CHRO Peptidase S16 lon domain protein OS=Cyano... 73 1e-11 tr|Q8DG63|Q8DG63_THEEB Tlr2461 protein OS=Thermosynechococcus el... 73 2e-11 tr|Q8YP65|Q8YP65_ANASP All4335 protein OS=Anabaena sp. (strain P... 72 2e-11 tr|Q3MDM7|Q3MDM7_ANAVT Peptidase S16, lon OS=Anabaena variabilis... 72 2e-11 tr|B7K832|B7K832_9CHRO Peptidase S16 lon domain protein OS=Cyano... 72 2e-11 tr|B2J5B3|B2J5B3_NOSP7 Peptidase S16, lon domain protein OS=Nost... 72 3e-11 tr|B5W7X9|B5W7X9_SPIMA Peptidase S16 lon domain protein OS=Arthr... 72 3e-11 tr|A0ZFC3|A0ZFC3_NODSP Peptidase S16, lon OS=Nodularia spumigena... 72 3e-11 tr|B4AVR1|B4AVR1_9CHRO Peptidase S16 lon domain protein OS=Cyano... 72 4e-11 tr|B0JWI5|B0JWI5_MICAN Probable ATP-dependent protease OS=Microc... 70 9e-11 tr|A8YC83|A8YC83_MICAE Similar to Nter part of tr|A3IYF2|A3IYF2_... 70 9e-11 tr|A8YAB6|A8YAB6_MICAE Similar to tr|Q4C268|Q4C268_CROWT Peptida... 70 9e-11 tr|Q3AMT8|Q3AMT8_SYNSC Peptidase S16, lon-like OS=Synechococcus ... 70 1e-10
>tr|A7NT45|A7NT45_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00014531001 PE=4 SV=1 Length = 284
Score = 106 bits (265), Expect = 1e-21 Identities = 57/105 (54%), Positives = 67/105 (63%), Gaps = 3/105 (2%) Frame = +2
Query: 356 RKRGLSCSGS---EKAETDQVASNXXXXXXXXXXXXXXXXXXXAPLQIFEYRYRMMMHTL 526 ++ L CS S EK T S+ PLQIFE+RYRMMMHTL Sbjct: 50 KENSLRCSASSFSEKHHTGSPKSDDVVELPLFPLPLVLFPGAILPLQIFEFRYRMMMHTL 109
Query: 527 LQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICKG 661 LQTDLRFG+IY+D T+ A+VGCV EV+KHERLVDDRFF+ICKG Sbjct: 110 LQTDLRFGVIYSD-ATTGTADVGCVGEVVKHERLVDDRFFLICKG 153
>tr|Q9FWT4|Q9FWT4_ARATH F1B16.1 protein (Putative protease) (Protease, putative) OS=Arabidopsis thaliana GN=At1g75460 PE=2 SV=1 Length = 278
Score = 106 bits (264), Expect = 1e-21 Identities = 46/61 (75%), Positives = 56/61 (91%) Frame = +2
Query: 479 PLQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICK 658 PLQIFE+RYR+MMHTLLQ+DLRFG++Y+D + S AEVGCV EV+KHERLVDDRFF++CK Sbjct: 88 PLQIFEFRYRIMMHTLLQSDLRFGVVYSDSVSGSAAEVGCVGEVVKHERLVDDRFFLVCK 147
Query: 659 G 661 G Sbjct: 148 G 148
>tr|Q8S9K2|Q8S9K2_ARATH At1g75460/F1B16_22 OS=Arabidopsis thaliana PE=2 SV=1 Length = 278
Score = 103 bits (257), Expect = 9e-21 Identities = 45/61 (73%), Positives = 55/61 (90%) Frame = +2
Query: 479 PLQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICK 658 PLQIFE+RYR+MMHTLL +DLRFG++Y+D + S AEVGCV EV+KHERLVDDRFF++CK Sbjct: 88 PLQIFEFRYRIMMHTLLLSDLRFGVVYSDSVSGSAAEVGCVGEVVKHERLVDDRFFLVCK 147
Query: 659 G 661 G Sbjct: 148 G 148
>tr|Q9FXH3|Q9FXH3_ARATH F6F9.20 protein (Putative uncharacterized protein At1g19740) OS=Arabidopsis thaliana GN=At1g19740 PE=2 SV=1 Length = 278
Score = 100 bits (248), Expect = 1e-19 Identities = 43/61 (70%), Positives = 54/61 (88%) Frame = +2
Query: 479 PLQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICK 658 PLQIFE+RYR+MM TLLQ+DLRFG++Y+D + S A +GCV E++KHERLVDDRFF+ICK Sbjct: 88 PLQIFEFRYRVMMQTLLQSDLRFGVVYSDAVSGSAAGIGCVGEIVKHERLVDDRFFLICK 147
Query: 659 G 661 G Sbjct: 148 G 148
>tr|Q6Z4A9|Q6Z4A9_ORYSJ Os07g0509700 protein OS=Oryza sativa subsp. japonica GN=P0409B11.11 PE=2 SV=1 Length = 291
Score = 94.7 bits (234), Expect = 4e-18 Identities = 41/60 (68%), Positives = 50/60 (83%) Frame = +2
Query: 482 LQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICKG 661 L IFE+RYR+MMHT+LQTDLRFG+++A A+VGCV EV+KHERL DDRFF+ICKG Sbjct: 94 LHIFEFRYRIMMHTVLQTDLRFGVVFAGSGAGGAADVGCVGEVVKHERLADDRFFLICKG 153
>tr|B6SMG8|B6SMG8_MAIZE Peptidase S16, lon OS=Zea mays PE=2 SV=1 Length = 286
Score = 94.7 bits (234), Expect = 4e-18 Identities = 43/60 (71%), Positives = 51/60 (85%) Frame = +2
Query: 482 LQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICKG 661 L IFEYRYR+MMHT+LQTDLRFG+++ + S AEVGCV EV+KHERL DDRFF+ICKG Sbjct: 90 LHIFEYRYRIMMHTVLQTDLRFGIVFVG-NSGSAAEVGCVGEVVKHERLADDRFFLICKG 148
>tr|A3BK70|A3BK70_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_023442 PE=4 SV=1 Length = 291
Score = 94.7 bits (234), Expect = 4e-18 Identities = 41/60 (68%), Positives = 50/60 (83%) Frame = +2
Query: 482 LQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICKG 661 L IFE+RYR+MMHT+LQTDLRFG+++A A+VGCV EV+KHERL DDRFF+ICKG Sbjct: 94 LHIFEFRYRIMMHTVLQTDLRFGVVFAGSGAGGAADVGCVGEVVKHERLADDRFFLICKG 153
>tr|A2YLQ2|A2YLQ2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26152 PE=4 SV=1 Length = 291
Score = 94.7 bits (234), Expect = 4e-18 Identities = 41/60 (68%), Positives = 50/60 (83%) Frame = +2
Query: 482 LQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICKG 661 L IFE+RYR+MMHT+LQTDLRFG+++A A+VGCV EV+KHERL DDRFF+ICKG Sbjct: 94 LHIFEFRYRIMMHTVLQTDLRFGVVFAGSGAGGAADVGCVGEVVKHERLADDRFFLICKG 153
>tr|B4FFQ4|B4FFQ4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 289
Score = 93.2 bits (230), Expect = 1e-17 Identities = 43/60 (71%), Positives = 51/60 (85%) Frame = +2
Query: 482 LQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICKG 661 L IFE RYR+MMHT+LQTDLRFG+++A + S AEVGCV EV+KHERL DDRFF+ICKG Sbjct: 93 LHIFELRYRIMMHTVLQTDLRFGIVFAG-NSGSAAEVGCVGEVVKHERLADDRFFLICKG 151
>tr|A9RQJ9|A9RQJ9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_204775 PE=4 SV=1 Length = 181
Score = 82.0 bits (201), Expect = 3e-14 Identities = 37/50 (74%), Positives = 45/50 (90%) Frame = +2
Query: 512 MMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICKG 661 MMHTLLQTDLRFG+++AD K+ +A VGCV E++KHERLVDDRFF+ICKG Sbjct: 1 MMHTLLQTDLRFGIVFAD-KSVGVAAVGCVGEIVKHERLVDDRFFMICKG 49
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