DK959022 |
Clone id |
TST39A01NGRL0003_I23 |
Library |
TST39 |
Length |
407 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_I23. 5' end sequence. |
Accession |
DK959022 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CTTTTCTCACGCCGACGGCTGACAAGGAACATGTCCAGTATGAAGAGCTCGAGTACTTGG CATTTGATGAAGCCAGCTGGACTCCTTGCGGAAGTCTGCGAGGTTCGAGTATACGAGGTC GGCAGAGACTGGCCCGGACCAACATGGCGGCAACGCAACCTCGACCTCGAGTGCTAAAAC AAAGACGCGCTAGCGCCCCTTTACAATCTCCTCCAGGGGAATGAACACCACATCCTCCTC TTCTTTGATCAAAAGCACGATGTGTGCATATGCACCGTCCGCAAACATGCTCCGCATGTT TTCGAAAGCTTGCTAGACCATACGGTGGATGTGGCGAAGAAAGTGCCCGATTTCCATGTC GACGTTCCCGCTGATGCCCATCCAGTTGAGCGACATCTTACACAGGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SW70 |
Definition |
sp|Q9SW70|SRP_VITRI Stress-related protein OS=Vitis riparia |
Align length |
100 |
Score (bit) |
37.0 |
E-value |
0.03 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8A1N1 |
Definition |
tr|B8A1N1|B8A1N1_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
102 |
Score (bit) |
42.0 |
E-value |
0.015 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959022|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_I23, 5' (407 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8A1N1|B8A1N1_MAIZE Putative uncharacterized protein OS=Zea m... 42 0.015 tr|B6TQG2|B6TQG2_MAIZE Stress-related protein OS=Zea mays PE=2 SV=1 40 0.059 tr|A9NNP5|A9NNP5_PICSI Putative uncharacterized protein OS=Picea... 40 0.077 tr|Q6ZUB8|Q6ZUB8_HUMAN cDNA FLJ43836 fis, clone TESTI4005857 OS=... 39 0.17 tr|Q6ZRL6|Q6ZRL6_HUMAN cDNA FLJ46261 fis, clone TESTI4025062 OS=... 39 0.17 tr|Q8H469|Q8H469_ORYSJ cDNA clone:001-007-D12, full insert seque... 37 0.38 tr|Q84PD3|Q84PD3_ORYSJ Stress-related protein-like protein (Frag... 37 0.38 tr|Q0D3Q8|Q0D3Q8_ORYSJ Os07g0671800 protein (Fragment) OS=Oryza ... 37 0.38 tr|A2YPT8|A2YPT8_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.38 tr|A5BRM4|A5BRM4_VITVI Putative uncharacterized protein (Fragmen... 37 0.50 tr|A5B0Z6|A5B0Z6_VITVI Putative uncharacterized protein OS=Vitis... 37 0.50 tr|B3MW44|B3MW44_DROAN GF22623 OS=Drosophila ananassae GN=GF2262... 35 1.4 tr|A7QP63|A7QP63_VITVI Chromosome chr1 scaffold_136, whole genom... 34 3.2 tr|Q1LV30|Q1LV30_DANRE Novel protein similar to vertebrate stabi... 33 5.5 tr|B2WJ80|B2WJ80_PYRTR RNA exonuclease 3 OS=Pyrenophora tritici-... 33 5.5 tr|Q6K6D4|Q6K6D4_ORYSJ Putative uncharacterized protein P0654A08... 33 7.2 tr|Q2QPG5|Q2QPG5_ORYSJ Ribosomal protein S15 containing protein ... 33 7.2 tr|Q9C414|Q9C414_ASPOR AreA OS=Aspergillus oryzae GN=areA PE=4 SV=1 33 7.2 tr|Q4KWD4|Q4KWD4_9BETR Envelope protein (Fragment) OS=Mouse mamm... 33 9.4 tr|Q9HQW2|Q9HQW2_HALSA Putative uncharacterized protein OS=Halob... 33 9.4 tr|B0R4K5|B0R4K5_HALS3 Pyridoxal phosphate-dependent aminotransf... 33 9.4
>tr|B8A1N1|B8A1N1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 259
Score = 42.0 bits (97), Expect = 0.015 Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 1/102 (0%) Frame = +1
Query: 76 AGLLAEVCEVRVYEVGRDWPGPTWRQRNLD-LEC*NKDALAPLYNLLQGNEHHILLFFDQ 252 A A VC +Y + +D GP + ++D +E K ++P+Y+ G +L F D+ Sbjct: 40 AAAQAAVCLAGLYGLAKDHAGPL--RPSVDAVESAVKGVVSPVYDRFGGLPLDVLAFVDR 97
Query: 253 KHDVCICTVRKHAPHVFESLLDHTVDVAKKVPDFHVDVPADA 378 K D + V KH P ++ H V + VP+ ++ A+A Sbjct: 98 KVDDTVHEVDKHLPGALKAASAHVYAVVRGVPEVARELAAEA 139
>tr|B6TQG2|B6TQG2_MAIZE Stress-related protein OS=Zea mays PE=2 SV=1 Length = 259
Score = 40.0 bits (92), Expect = 0.059 Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 1/102 (0%) Frame = +1
Query: 76 AGLLAEVCEVRVYEVGRDWPGPTWRQRNLD-LEC*NKDALAPLYNLLQGNEHHILLFFDQ 252 A A VC +Y + +D GP + ++D +E ++P+Y+ G +L F D+ Sbjct: 40 AAAQAAVCLAGLYGLAKDHAGPL--RPSVDAVESAVNGVVSPVYDRFGGLPLDVLAFVDR 97
Query: 253 KHDVCICTVRKHAPHVFESLLDHTVDVAKKVPDFHVDVPADA 378 K D + V KH P ++ H V + VP+ ++ A+A Sbjct: 98 KVDDTVHEVDKHLPGALKAASAHVYAVVRGVPEVARELAAEA 139
>tr|A9NNP5|A9NNP5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 240
Score = 39.7 bits (91), Expect = 0.077 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 1/103 (0%) Frame = +1
Query: 76 AGLLAEVCEVRVYEVGRDWPGPTWRQRNLD-LEC*NKDALAPLYNLLQGNEHHILLFFDQ 252 A L A VC +Y+ ++ GP + +D +E K ++P+Y G +L F D+ Sbjct: 28 AVLRAAVCLSSLYKYAKENAGPL--KPGVDTVEQTVKTVVSPVYLKFDGKHLELLHFLDR 85
Query: 253 KHDVCICTVRKHAPHVFESLLDHTVDVAKKVPDFHVDVPADAH 381 K D I V + P + + D+AK+VPD V ++ H Sbjct: 86 KVDDTIGKVDEFVPPILKQRTCEVYDMAKQVPDVARSVISEIH 128
>tr|Q6ZUB8|Q6ZUB8_HUMAN cDNA FLJ43836 fis, clone TESTI4005857 OS=Homo sapiens PE=2 SV=1 Length = 280
Score = 38.5 bits (88), Expect = 0.17 Identities = 19/47 (40%), Positives = 25/47 (53%) Frame = -1
Query: 395 CRSTGWASAGTSTWKSGTFFATSTVWSSKLSKTCGACLRTVHMHTSC 255 CRS+G +S S W SGT + + WSS S T +C + TSC Sbjct: 30 CRSSGTSSTSRSWWSSGTSSTSCSWWSSGTSSTFCSCWSSGTSFTSC 76
Score = 37.4 bits (85), Expect = 0.38 Identities = 20/46 (43%), Positives = 24/46 (52%) Frame = -1
Query: 395 CRSTGWASAGTSTWKSGTFFATSTVWSSKLSKTCGACLRTVHMHTS 258 CRS+G +S S W SGT +ST WS K S T C + TS Sbjct: 90 CRSSGTSSTSCSCWSSGT---SSTSWSCKSSGTSSTCYMCLSSGTS 132
Score = 37.0 bits (84), Expect = 0.50 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 5/50 (10%) Frame = -1
Query: 389 STGWASAGTST-----WKSGTFFATSTVWSSKLSKTCGACLRTVHMHTSC 255 S W S+GTS+ W SGT F + + WSS S T +C + TSC Sbjct: 51 SCSWWSSGTSSTFCSCWSSGTSFTSCSCWSSGTSSTPCSCRSSGTSSTSC 100
>tr|Q6ZRL6|Q6ZRL6_HUMAN cDNA FLJ46261 fis, clone TESTI4025062 OS=Homo sapiens PE=2 SV=1 Length = 280
Score = 38.5 bits (88), Expect = 0.17 Identities = 19/47 (40%), Positives = 25/47 (53%) Frame = -1
Query: 395 CRSTGWASAGTSTWKSGTFFATSTVWSSKLSKTCGACLRTVHMHTSC 255 CRS+G +S S W SGT + + WSS S T +C + TSC Sbjct: 30 CRSSGTSSTSRSWWSSGTSSTSCSWWSSGTSSTFCSCWSSGTSFTSC 76
Score = 37.4 bits (85), Expect = 0.38 Identities = 20/46 (43%), Positives = 24/46 (52%) Frame = -1
Query: 395 CRSTGWASAGTSTWKSGTFFATSTVWSSKLSKTCGACLRTVHMHTS 258 CRS+G +S S W SGT +ST WS K S T C + TS Sbjct: 90 CRSSGTSSTSCSCWSSGT---SSTSWSCKSSGTSSTCYMCLSSGTS 132
Score = 37.0 bits (84), Expect = 0.50 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 5/50 (10%) Frame = -1
Query: 389 STGWASAGTST-----WKSGTFFATSTVWSSKLSKTCGACLRTVHMHTSC 255 S W S+GTS+ W SGT F + + WSS S T +C + TSC Sbjct: 51 SCSWWSSGTSSTFCSCWSSGTSFTSCSCWSSGTSSTPCSCRSSGTSSTSC 100
>tr|Q8H469|Q8H469_ORYSJ cDNA clone:001-007-D12, full insert sequence OS=Oryza sativa subsp. japonica GN=P0470D12.125 PE=2 SV=1 Length = 255
Score = 37.4 bits (85), Expect = 0.38 Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Frame = +1
Query: 76 AGLLAEVCEVRVYEVGRDWPGPTWRQRNLD-LEC*NKDALAPLYNLLQGNEHHILLFFDQ 252 A A +C +Y + +D GP + +D +E K + P+Y G +L F D+ Sbjct: 31 AAAQATICLAGLYALAKDHAGPL--RPGVDAVESAVKGVVGPVYGRFHGVPLDVLAFVDR 88
Query: 253 KHDVCICTVRKHAPHVFESLLDHTVDVAKKVPDFHVDVPAD 375 K D + + +H P ++ VA+ VPD ++ A+ Sbjct: 89 KVDDTVQELDRHLPPTLKAASAKACAVARGVPDVARELTAE 129
>tr|Q84PD3|Q84PD3_ORYSJ Stress-related protein-like protein (Fragment) OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 298
Score = 37.4 bits (85), Expect = 0.38 Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Frame = +1
Query: 76 AGLLAEVCEVRVYEVGRDWPGPTWRQRNLD-LEC*NKDALAPLYNLLQGNEHHILLFFDQ 252 A A +C +Y + +D GP + +D +E K + P+Y G +L F D+ Sbjct: 74 AAAQATICLAGLYALAKDHAGPL--RPGVDAVESAVKGVVGPVYGRFHGVPLDVLAFVDR 131
Query: 253 KHDVCICTVRKHAPHVFESLLDHTVDVAKKVPDFHVDVPAD 375 K D + + +H P ++ VA+ VPD ++ A+ Sbjct: 132 KVDDTVQELDRHLPPTLKAASAKACAVARGVPDVARELTAE 172
>tr|Q0D3Q8|Q0D3Q8_ORYSJ Os07g0671800 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os07g0671800 PE=4 SV=1 Length = 297
Score = 37.4 bits (85), Expect = 0.38 Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Frame = +1
Query: 76 AGLLAEVCEVRVYEVGRDWPGPTWRQRNLD-LEC*NKDALAPLYNLLQGNEHHILLFFDQ 252 A A +C +Y + +D GP + +D +E K + P+Y G +L F D+ Sbjct: 73 AAAQATICLAGLYALAKDHAGPL--RPGVDAVESAVKGVVGPVYGRFHGVPLDVLAFVDR 130
Query: 253 KHDVCICTVRKHAPHVFESLLDHTVDVAKKVPDFHVDVPAD 375 K D + + +H P ++ VA+ VPD ++ A+ Sbjct: 131 KVDDTVQELDRHLPPTLKAASAKACAVARGVPDVARELTAE 171
>tr|A2YPT8|A2YPT8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27290 PE=4 SV=1 Length = 255
Score = 37.4 bits (85), Expect = 0.38 Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Frame = +1
Query: 76 AGLLAEVCEVRVYEVGRDWPGPTWRQRNLD-LEC*NKDALAPLYNLLQGNEHHILLFFDQ 252 A A +C +Y + +D GP + +D +E K + P+Y G +L F D+ Sbjct: 31 AAAQATICLAGLYALAKDHAGPL--RPGVDAVESAVKGVVGPVYGRFHGVPLDVLAFVDR 88
Query: 253 KHDVCICTVRKHAPHVFESLLDHTVDVAKKVPDFHVDVPAD 375 K D + + +H P ++ VA+ VPD ++ A+ Sbjct: 89 KVDDTVQELDRHLPPTLKAASAKACAVARGVPDVARELTAE 129
>tr|A5BRM4|A5BRM4_VITVI Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_017032 PE=4 SV=1 Length = 249
Score = 37.0 bits (84), Expect = 0.50 Identities = 23/100 (23%), Positives = 45/100 (45%) Frame = +1
Query: 76 AGLLAEVCEVRVYEVGRDWPGPTWRQRNLDLEC*NKDALAPLYNLLQGNEHHILLFFDQK 255 A + VC +YE ++ GP + +E K + P+Y +L+F D+K Sbjct: 29 AAIYVIVCFSSLYEYAKENSGPL-KPGVQTVEGTVKTVIGPVYEKFYDVPFELLMFVDRK 87
Query: 256 HDVCICTVRKHAPHVFESLLDHTVDVAKKVPDFHVDVPAD 375 + I + +H P + + + VA+K P+ + V ++ Sbjct: 88 VEASIYELERHVPSLVKRASCQAITVAQKAPELALAVASE 127
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