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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK958572
Clone id TST39A01NGRL0002_F19
Library
Length 686
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0002_F19. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
CACACACGTAGGACGGCGAGCTGCGTTTTTGTGCAGGAAGGGCAATGGCGGCCTCACGCC
TCTTCAACGTTGCTGCAGCCCAAATGACCTCCACCAACGATCTCCACTCCAACTTCCTCA
CTTGCTCTGGCCTCGTCCAGTATGCAGGCACCCTTGCGTTCACACAGATCAACTGCCAGT
TTACAGTTAGTTGATCTTCATTGATATAAATGGATTCAGTTATGTATGCTGCGTTTATGG
GGTAATGCCCATGCTCATGCTCGTGACCAGGATTTACATTTCAACCATTTGTACGACAGC
ACTCTGCATGCCAGAACCAGAATGAAGGGCCTACCTTAACACAATGAGAAGTTTTCTGCC
CGAAACGAGGCTCTCTGTGGACTGACAAGTCACCTCGATGTCAACAAATTAAGGCAGTCA
TCAGTAATCAGAAGGCTCCTAATGATAACAGCAATGAGAGATCAACTTCAGAGCGCACTC
GTGCTGCCCTTGAGAGGCTTTTTGCACAAAGCCAGAGGTTTGAGCAGGAGTCTGATTTAG
GCTCTGGAAAGAATAAAGGCTATGATTTGGACATTGCTTGTGTGAAGACGTTTGTTGATG
AAGCAGTCGAGGCTTTGCATATGAAGGAGGAGGAGCTTAGGGCTGCAGAGAATTCTGTCA
AGGTGGATGAAGAGAAACTCAAGCGT
■■Homology search results ■■ -
sp_hit_id Q6ZU80
Definition sp|Q6ZU80|CN145_HUMAN Uncharacterized protein C14orf145 OS=Homo sapiens
Align length 71
Score (bit) 36.2
E-value 0.17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958572|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0002_F19, 5'
         (686 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6ZU80|CN145_HUMAN Uncharacterized protein C14orf145 OS=Homo ...    36   0.17 
sp|Q32LH4|NIT1_BOVIN Nitrilase homolog 1 OS=Bos taurus GN=NIT1 P...    34   0.64 
sp|O76463|NFT1_CAEEL Nitrilase and fragile histidine triad fusio...    34   0.83 
sp|O61308|PUMA_PARUN 227 kDa spindle- and centromere-associated ...    33   1.4  
sp|A6W0C9|SYS_MARMS Seryl-tRNA synthetase OS=Marinomonas sp. (st...    32   2.4  
sp|Q28ET8|IF4E3_XENTR Eukaryotic translation initiation factor 4...    32   3.2  
sp|Q86X76|NIT1_HUMAN Nitrilase homolog 1 OS=Homo sapiens GN=NIT1...    32   4.1  
sp|P31034|CBK1_KLULA Serine/threonine-protein kinase CBK1 OS=Klu...    32   4.1  
sp|Q7TSH9|ZN184_MOUSE Zinc finger protein 184 OS=Mus musculus GN...    31   5.4  
sp|Q5A2K0|NST1_CANAL Stress response protein NST1 OS=Candida alb...    31   5.4  
sp|Q05682|CALD1_HUMAN Caldesmon OS=Homo sapiens GN=CALD1 PE=1 SV=2     31   5.4  
sp|Q2RFW0|RF1_MOOTA Peptide chain release factor 1 OS=Moorella t...    30   9.2  
sp|Q6NZQ4|PAXI1_MOUSE PAX-interacting protein 1 OS=Mus musculus ...    30   9.2  
sp|Q8C4P0|K1958_MOUSE Uncharacterized protein KIAA1958 homolog O...    30   9.2  
sp|Q8N8K9|K1958_HUMAN Uncharacterized protein KIAA1958 OS=Homo s...    30   9.2  

>sp|Q6ZU80|CN145_HUMAN Uncharacterized protein C14orf145 OS=Homo
           sapiens GN=C14orf145 PE=1 SV=2
          Length = 1094

 Score = 36.2 bits (82), Expect = 0.17
 Identities = 19/71 (26%), Positives = 37/71 (52%)
 Frame = +3

Query: 444 DNSNERSTSERTRAALERLFAQSQRFEQESDLGSGKNKGYDLDIACVKTFVDEAVEALHM 623
           ++  E++ ++  R  LE+L +Q  R  +E      +NK   L   C+K  ++E  + + +
Sbjct: 739 ESLEEKNMAKIHRGQLEKLKSQCDRLTEELTQNENENKKLKLKYQCLKDQLEEREKHISI 798

Query: 624 KEEELRAAENS 656
           +EE LR  E +
Sbjct: 799 EEEHLRRMEEA 809


>sp|Q32LH4|NIT1_BOVIN Nitrilase homolog 1 OS=Bos taurus GN=NIT1 PE=2
           SV=1
          Length = 328

 Score = 34.3 bits (77), Expect = 0.64
 Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
 Frame = +3

Query: 39  RAMAASRLFN----VAAAQMTSTNDLHSNFLTCSGLVQYAGTL 155
           R MAAS  F+    VA  Q+TST D   NF TC+ L++ A  L
Sbjct: 36  RTMAASSSFSELPLVAVCQVTSTPDKEQNFKTCAELIREAARL 78


>sp|O76463|NFT1_CAEEL Nitrilase and fragile histidine triad fusion
           protein NitFhit OS=Caenorhabditis elegans GN=nft-1 PE=1
           SV=1
          Length = 440

 Score = 33.9 bits (76), Expect = 0.83
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +3

Query: 39  RAMAASRLFNVAAAQMTSTNDLHSNFLTCSGLVQYAG 149
           R MA  R F +A  QMTS NDL  NF     +++ AG
Sbjct: 8   RTMATGRHF-IAVCQMTSDNDLEKNFQAAKNMIERAG 43


>sp|O61308|PUMA_PARUN 227 kDa spindle- and centromere-associated
            protein OS=Parascaris univalens GN=PUMA1 PE=2 SV=1
          Length = 1955

 Score = 33.1 bits (74), Expect = 1.4
 Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
 Frame = +3

Query: 390  SPRCQQIKAVISNQKAPNDNSNERSTSERTRAALERLFAQSQRFEQESDLGSGKNKGYDL 569
            S + +  K    N K   +  +  S+ ++    ++ L  + ++ EQE D    +NK    
Sbjct: 708  SVQTEVTKLTTLNDKLQKEKQSIMSSKQKADTDVDLLKEKLRKLEQECDKLKEENKALHE 767

Query: 570  DIACVKTFVDEAVEALHMKEEELRAAENSV--------KVDEEKLKR 686
            D    +    E    +H+ E +L+ A   V        K+DEE  +R
Sbjct: 768  DEQIARQMCKEEASRIHLLERDLKDAMTEVEELKKQLQKMDEENSER 814


>sp|A6W0C9|SYS_MARMS Seryl-tRNA synthetase OS=Marinomonas sp.
           (strain MWYL1) GN=serS PE=3 SV=1
          Length = 433

 Score = 32.3 bits (72), Expect = 2.4
 Identities = 17/48 (35%), Positives = 30/48 (62%)
 Frame = +3

Query: 516 RFEQESDLGSGKNKGYDLDIACVKTFVDEAVEALHMKEEELRAAENSV 659
           R + E+     K KGY+LD+A   + ++E  +A+ ++ E+L+ A NSV
Sbjct: 8   RADPEAIAAQLKKKGYELDVATFSS-LEERRKAIQVETEQLQQARNSV 54


>sp|Q28ET8|IF4E3_XENTR Eukaryotic translation initiation factor 4E
           type 3 OS=Xenopus tropicalis GN=eif4e3 PE=2 SV=1
          Length = 218

 Score = 32.0 bits (71), Expect = 3.2
 Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
 Frame = +1

Query: 265 DQDLHFNH--LYDSTLHARTRMKGLP*HNEKFSARNEALCGLTSHLDVNKLRQSSVIRRL 438
           D+ LH NH  L +  L      +G+P H+      + +L G T+    + L++   +  +
Sbjct: 17  DEQLHLNHRELGELALPQEPDTEGIPLHSPWTFWLDRSLPGTTAAECESNLKKIYTVHTI 76

Query: 439 LMITAMRDQLQSALVLPLRGFLHKARGLSRSLI*ALERIKAMIWTLLV 582
               ++ + +     LPLR   H  RG  + L       K  +W + V
Sbjct: 77  QSFWSVYNNIPQVTNLPLRWSYHLMRGERKPLWEEESNAKGGVWKMKV 124


>sp|Q86X76|NIT1_HUMAN Nitrilase homolog 1 OS=Homo sapiens GN=NIT1
           PE=1 SV=2
          Length = 327

 Score = 31.6 bits (70), Expect = 4.1
 Identities = 21/43 (48%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
 Frame = +3

Query: 39  RAMAAS----RLFNVAAAQMTSTNDLHSNFLTCSGLVQYAGTL 155
           RAMA S     L  VA  Q+TST D   NF TC+ LV+ A  L
Sbjct: 35  RAMAISSSSCELPLVAVCQVTSTPDKQQNFKTCAELVREAARL 77


>sp|P31034|CBK1_KLULA Serine/threonine-protein kinase CBK1
           OS=Kluyveromyces lactis GN=CBK1 PE=3 SV=2
          Length = 718

 Score = 31.6 bits (70), Expect = 4.1
 Identities = 16/45 (35%), Positives = 19/45 (42%)
 Frame = -3

Query: 612 PRLLHQQTSSHKQCPNHSLYSFQSLNQTPAQTSGFVQKASQGQHE 478
           P    QQ+SS  Q P H+ Y  Q   Q   Q     Q   QGQ +
Sbjct: 153 PTFTQQQSSSQPQSPQHNTYHAQQQQQQQQQQQQTQQAQQQGQRQ 197


>sp|Q7TSH9|ZN184_MOUSE Zinc finger protein 184 OS=Mus musculus
           GN=Zfp184 PE=2 SV=1
          Length = 737

 Score = 31.2 bits (69), Expect = 5.4
 Identities = 19/73 (26%), Positives = 35/73 (47%)
 Frame = +3

Query: 462 STSERTRAALERLFAQSQRFEQESDLGSGKNKGYDLDIACVKTFVDEAVEALHMKEEELR 641
           + S+R   +LE+L A  Q   +E  +        + +++   +F+ +   AL     + R
Sbjct: 128 TNSKRDDGSLEKLQANQQMLPREVQITEKTAPTCESNLSVSSSFITQTEVALDQPSTKTR 187

Query: 642 AAENSVKVDEEKL 680
           A +NS  V +EKL
Sbjct: 188 AKQNSHPVKKEKL 200


>sp|Q5A2K0|NST1_CANAL Stress response protein NST1 OS=Candida
           albicans GN=NST1 PE=3 SV=1
          Length = 1399

 Score = 31.2 bits (69), Expect = 5.4
 Identities = 23/76 (30%), Positives = 40/76 (52%)
 Frame = +3

Query: 456 ERSTSERTRAALERLFAQSQRFEQESDLGSGKNKGYDLDIACVKTFVDEAVEALHMKEEE 635
           E+ + +RT+  +E L A+ +  ++E +L   K K    +   ++    E  E    KEEE
Sbjct: 707 EKLSQDRTQKLIEELEAE-ENAKKERELKKLKQKEKAKEKKRLQQLAKE--EERKRKEEE 763

Query: 636 LRAAENSVKVDEEKLK 683
           L+A E   ++ +EKLK
Sbjct: 764 LKAKEEEQRLQKEKLK 779
tr_hit_id Q6ZIG6
Definition tr|Q6ZIG6|Q6ZIG6_ORYSJ Os02g0186400 protein OS=Oryza sativa subsp. japonica
Align length 93
Score (bit) 53.1
E-value 2.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958572|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0002_F19, 5'
         (686 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6ZIG6|Q6ZIG6_ORYSJ Os02g0186400 protein OS=Oryza sativa subs...    53   2e-05
tr|B8AJ77|B8AJ77_ORYSI Putative uncharacterized protein OS=Oryza...    53   2e-05
tr|A7P5V2|A7P5V2_VITVI Chromosome chr4 scaffold_6, whole genome ...    48   7e-04
tr|A3A3X2|A3A3X2_ORYSJ Putative uncharacterized protein OS=Oryza...    44   0.007
tr|Q9LE50|Q9LE50_ARATH Nitrilase 1 like protein OS=Arabidopsis t...    42   0.028
tr|Q94JV5|Q94JV5_ARATH AT4g08790/T32A17_100 OS=Arabidopsis thali...    42   0.028
tr|A9NR10|A9NR10_PICSI Putative uncharacterized protein OS=Picea...    42   0.048
tr|A8Q5M6|A8Q5M6_BRUMA SMC proteins Flexible Hinge Domain contai...    38   0.69 
tr|A7Q410|A7Q410_VITVI Chromosome chr13 scaffold_48, whole genom...    37   1.2  
tr|Q5RIY9|Q5RIY9_DANRE Novel protein (Fragment) OS=Danio rerio G...    36   2.6  
tr|A2FSV7|A2FSV7_TRIVA Putative uncharacterized protein OS=Trich...    36   2.6  
tr|B6SE89|B6SE89_XENLA Smooth muscle myosin heavy chain isoform ...    35   4.5  
tr|B6SE88|B6SE88_XENLA Smooth muscle myosin heavy chain isoform ...    35   4.5  
tr|Q5V1Q9|Q5V1Q9_HALMA Putative uncharacterized protein OS=Haloa...    35   4.5  
tr|B4KQR0|B4KQR0_DROMO GI20420 OS=Drosophila mojavensis GN=GI204...    35   5.9  
tr|A2EPG1|A2EPG1_TRIVA Viral A-type inclusion protein, putative ...    35   5.9  
tr|A3KQF2|A3KQF2_DANRE Novel protein (Fragment) OS=Danio rerio G...    34   7.7  

>tr|Q6ZIG6|Q6ZIG6_ORYSJ Os02g0186400 protein OS=Oryza sativa subsp.
           japonica GN=OJ1115_B01.25 PE=4 SV=1
          Length = 763

 Score = 53.1 bits (126), Expect = 2e-05
 Identities = 33/93 (35%), Positives = 50/93 (53%)
 Frame = +3

Query: 408 IKAVISNQKAPNDNSNERSTSERTRAALERLFAQSQRFEQESDLGSGKNKGYDLDIACVK 587
           IK+V+   +A N    E   +E  R  LERLFA++QR     D  + ++    + I  +K
Sbjct: 55  IKSVVKGIRA-NITDGENGATEPARELLERLFAKTQRL----DTSASQDSELSMSIDVLK 109

Query: 588 TFVDEAVEALHMKEEELRAAENSVKVDEEKLKR 686
           +  + A+  L  KE +LR AEN V VD+ +L R
Sbjct: 110 SEFEAALSTLRKKERDLRDAENRVSVDQVRLNR 142


>tr|B8AJ77|B8AJ77_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_06146 PE=4 SV=1
          Length = 763

 Score = 53.1 bits (126), Expect = 2e-05
 Identities = 33/93 (35%), Positives = 50/93 (53%)
 Frame = +3

Query: 408 IKAVISNQKAPNDNSNERSTSERTRAALERLFAQSQRFEQESDLGSGKNKGYDLDIACVK 587
           IK+V+   +A N    E   +E  R  LERLFA++QR     D  + ++    + I  +K
Sbjct: 55  IKSVVKGIRA-NITDGENGATEPARELLERLFAKTQRL----DTSASQDSELSMSIDVLK 109

Query: 588 TFVDEAVEALHMKEEELRAAENSVKVDEEKLKR 686
           +  + A+  L  KE +LR AEN V VD+ +L R
Sbjct: 110 SEFEAALSTLRKKERDLRDAENRVSVDQVRLNR 142


>tr|A7P5V2|A7P5V2_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032671001
           PE=4 SV=1
          Length = 774

 Score = 47.8 bits (112), Expect = 7e-04
 Identities = 30/95 (31%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
 Frame = +3

Query: 408 IKAVISNQKAPNDNSNERSTSERTRAALERLFAQSQRFEQ--ESDLGSGKNKGYDLDIAC 581
           +K+V++N+K+   + N+  ++E  R  LERLFAQ+Q+ E+    D G   +    L++  
Sbjct: 48  VKSVLNNRKS---SINDNGSTEPARVLLERLFAQTQKLEEHMSRDPGLPLDIQLGLNLET 104

Query: 582 VKTFVDEAVEALHMKEEELRAAENSVKVDEEKLKR 686
           +++ +  A+ AL  KEE+L+ A   V ++  +L R
Sbjct: 105 LESDLQAALVALKKKEEDLQDAAGMVLMEHTELNR 139


>tr|A3A3X2|A3A3X2_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_005494 PE=4 SV=1
          Length = 736

 Score = 44.3 bits (103), Expect = 0.007
 Identities = 25/66 (37%), Positives = 38/66 (57%)
 Frame = +3

Query: 489 LERLFAQSQRFEQESDLGSGKNKGYDLDIACVKTFVDEAVEALHMKEEELRAAENSVKVD 668
           LERLFA++QR     D  + ++    + I  +K+  + A+  L  KE +LR AEN V VD
Sbjct: 54  LERLFAKTQRL----DTSASQDSELSMSIDVLKSEFEAALSTLRKKERDLRDAENRVSVD 109

Query: 669 EEKLKR 686
           + +L R
Sbjct: 110 QVRLNR 115


>tr|Q9LE50|Q9LE50_ARATH Nitrilase 1 like protein OS=Arabidopsis
           thaliana GN=AT4g08790 PE=2 SV=1
          Length = 316

 Score = 42.4 bits (98), Expect = 0.028
 Identities = 24/45 (53%), Positives = 29/45 (64%)
 Frame = +3

Query: 42  AMAASRLFNVAAAQMTSTNDLHSNFLTCSGLVQYAGTLAFTQINC 176
           A   ++   VAAAQMTS NDL +NF TCS LVQ A  LA  ++ C
Sbjct: 30  ATTVNKTVRVAAAQMTSVNDLMTNFATCSRLVQEA-ALAGAKLIC 73


>tr|Q94JV5|Q94JV5_ARATH AT4g08790/T32A17_100 OS=Arabidopsis thaliana
           GN=At4g08790 PE=2 SV=1
          Length = 307

 Score = 42.4 bits (98), Expect = 0.028
 Identities = 24/45 (53%), Positives = 29/45 (64%)
 Frame = +3

Query: 42  AMAASRLFNVAAAQMTSTNDLHSNFLTCSGLVQYAGTLAFTQINC 176
           A   ++   VAAAQMTS NDL +NF TCS LVQ A  LA  ++ C
Sbjct: 30  ATTVNKTVRVAAAQMTSVNDLMTNFATCSRLVQEA-ALAGAKLIC 73


>tr|A9NR10|A9NR10_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 328

 Score = 41.6 bits (96), Expect = 0.048
 Identities = 23/39 (58%), Positives = 26/39 (66%)
 Frame = +3

Query: 30  CAGRAMAASRLFNVAAAQMTSTNDLHSNFLTCSGLVQYA 146
           C      A R+  V AAQMTSTNDL++NF TCS LVQ A
Sbjct: 32  CTTEFSMAGRV-KVGAAQMTSTNDLNANFQTCSRLVQEA 69


>tr|A8Q5M6|A8Q5M6_BRUMA SMC proteins Flexible Hinge Domain containing
            protein OS=Brugia malayi GN=Bm1_43270 PE=4 SV=1
          Length = 1208

 Score = 37.7 bits (86), Expect = 0.69
 Identities = 22/92 (23%), Positives = 45/92 (48%)
 Frame = +3

Query: 405  QIKAVISNQKAPNDNSNERSTSERTRAALERLFAQSQRFEQESDLGSGKNKGYDLDIACV 584
            Q +  + N         E+ T    R   E++F + ++ E + DLG+ +      ++A +
Sbjct: 758  QYRDTVENGNVERRKLEEKITVLNERKKNEKMFQEKEKKEAQKDLGTAEK-----ELASL 812

Query: 585  KTFVDEAVEALHMKEEELRAAENSVKVDEEKL 680
            K+  ++A  +L    EE+ + + +V  DEE+L
Sbjct: 813  KSSFEKARVSLETLREEITSLQKTVAEDEEEL 844


>tr|A7Q410|A7Q410_VITVI Chromosome chr13 scaffold_48, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00029495001
           PE=4 SV=1
          Length = 282

 Score = 37.0 bits (84), Expect = 1.2
 Identities = 18/26 (69%), Positives = 20/26 (76%)
 Frame = +3

Query: 69  VAAAQMTSTNDLHSNFLTCSGLVQYA 146
           VAA QMTS NDL +NF TCS LV+ A
Sbjct: 7   VAAVQMTSVNDLAANFATCSRLVKEA 32


>tr|Q5RIY9|Q5RIY9_DANRE Novel protein (Fragment) OS=Danio rerio
           GN=si:dkey-163f12.6 PE=2 SV=1
          Length = 286

 Score = 35.8 bits (81), Expect = 2.6
 Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 9/131 (6%)
 Frame = +3

Query: 312 QNQNEGPTLTQ*EVFCPKRGSLWTDKSPRCQQIKAVISNQKAPNDNSNERSTSERTRAAL 491
           +NQ E  TL +       RG LWT      + +KA +  Q         R   E  + AL
Sbjct: 137 ENQREIHTLRE-------RGELWTQTQAELESVKAELETQ---------RREMENLQQAL 180

Query: 492 ERLFAQSQRFEQESDLGSGKNKGYDLDIA---------CVKTFVDEAVEALHMKEEELRA 644
           +    Q QR +QE D+ +  N+  + +           C+     E   A+  +  ++R 
Sbjct: 181 QDSVIQLQRNKQERDVTNRNNRSLNTEKMDKRRVGHHNCIPNDSYEKASAVKKRTSQMRL 240

Query: 645 AENSVKVDEEK 677
            + + +VD  K
Sbjct: 241 KKKASEVDNLK 251