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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK958442
Clone id TST39A01NGRL0002_A06
Library
Length 318
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0002_A06. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
TGCGTTCTACTCTGGAAGGAACGGGCGGATGCTGCAGAAAGTGGTGGAATATCACCACGT
GGCATCGACCTGGCCATCTCTACTCCTCTGCCTTTCCTGTGGCCCTTACCCTCCCTAACG
TCGACGAGCTTTCTCATACAACCGAGGTGCCTAGCCCTCTCGCCCTCCTAACCCTATCTC
CAGCTGTTTCGACATGTATGGCCGCCGTCCTGCCCATCGTGATAACACTAAGTACGATGA
CGTCGTGGGAGTCCCCACTGCCTGCTCGGCTGACGAGCTCAATAAGGCCTATCGCAAAGC
TGCTAGTGTGAACCACCC
■■Homology search results ■■ -
sp_hit_id P42824
Definition sp|P42824|DNJH2_ALLPO DnaJ protein homolog 2 OS=Allium porrum
Align length 41
Score (bit) 48.1
E-value 1.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958442|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0002_A06, 5'
         (318 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P42824|DNJH2_ALLPO DnaJ protein homolog 2 OS=Allium porrum GN...    48   1e-05
sp|P43644|DNJH_ATRNU DnaJ protein homolog ANJ1 OS=Atriplex nummu...    48   2e-05
sp|Q94AW8|DNAJ3_ARATH Chaperone protein dnaJ 3 OS=Arabidopsis th...    47   2e-05
sp|Q04960|DNJH_CUCSA DnaJ protein homolog OS=Cucumis sativus GN=...    46   5e-05
sp|P42825|DNAJ2_ARATH Chaperone protein dnaJ 2 OS=Arabidopsis th...    46   5e-05
sp|O35824|DNJA2_RAT DnaJ homolog subfamily A member 2 OS=Rattus ...    35   0.12 
sp|Q9QYJ0|DNJA2_MOUSE DnaJ homolog subfamily A member 2 OS=Mus m...    35   0.12 
sp|O60884|DNJA2_HUMAN DnaJ homolog subfamily A member 2 OS=Homo ...    35   0.12 
sp|Q2HJ94|DNJA2_BOVIN DnaJ homolog subfamily A member 2 OS=Bos t...    35   0.12 
sp|Q8CWT2|DNAJ_STRR6 Chaperone protein dnaJ OS=Streptococcus pne...    33   0.44 
sp|P95830|DNAJ_STRPN Chaperone protein dnaJ OS=Streptococcus pne...    33   0.44 
sp|P40564|YIS4_YEAST Uncharacterized J domain-containing protein...    32   0.75 
sp|P25491|MAS5_YEAST Mitochondrial protein import protein MAS5 O...    32   0.75 
sp|Q9JMC3|DNJA4_MOUSE DnaJ homolog subfamily A member 4 OS=Mus m...    32   0.75 
sp|Q8WW22|DNJA4_HUMAN DnaJ homolog subfamily A member 4 OS=Homo ...    32   0.75 
sp|Q128K1|DNAJ_POLSJ Chaperone protein dnaJ OS=Polaromonas sp. (...    32   0.75 
sp|Q8NLY8|DNAJ2_CORGL Chaperone protein dnaJ 2 OS=Corynebacteriu...    32   0.75 
sp|Q71ZJ8|DNAJ_LISMF Chaperone protein dnaJ OS=Listeria monocyto...    32   0.98 
sp|A9KKT9|DNAJ_CLOPH Chaperone protein dnaJ OS=Clostridium phyto...    32   0.98 
sp|Q87BS9|DNAJ_XYLFT Chaperone protein dnaJ OS=Xylella fastidios...    32   1.3  
sp|Q9PB06|DNAJ_XYLFA Chaperone protein dnaJ OS=Xylella fastidios...    32   1.3  
sp|P0C0B5|DNAJ_STRPY Chaperone protein dnaJ OS=Streptococcus pyo...    32   1.3  
sp|Q8NZM7|DNAJ_STRP8 Chaperone protein dnaJ OS=Streptococcus pyo...    32   1.3  
sp|Q5XAD7|DNAJ_STRP6 Chaperone protein dnaJ OS=Streptococcus pyo...    32   1.3  
sp|Q8K625|DNAJ_STRP3 Chaperone protein dnaJ OS=Streptococcus pyo...    32   1.3  
sp|P0C0B6|DNAJ_STRP1 Chaperone protein dnaJ OS=Streptococcus pyo...    32   1.3  
sp|A0AIS3|DNAJ_LISW6 Chaperone protein dnaJ OS=Listeria welshime...    32   1.3  
sp|Q9S5A3|DNAJ_LISMO Chaperone protein dnaJ OS=Listeria monocyto...    32   1.3  
sp|Q92BN9|DNAJ_LISIN Chaperone protein dnaJ OS=Listeria innocua ...    32   1.3  
sp|Q9NZQ0|DJC27_HUMAN DnaJ homolog subfamily C member 27 OS=Homo...    32   1.3  

>sp|P42824|DNJH2_ALLPO DnaJ protein homolog 2 OS=Allium porrum
           GN=LDJ2 PE=2 SV=1
          Length = 418

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 22/41 (53%), Positives = 28/41 (68%)
 Frame = +2

Query: 194 MYGRRPAHRDNTKYDDVVGVPTACSADELNKAYRKAASVNH 316
           M+GR P   DNTKY +V+GV    + ++L KAYRKAA  NH
Sbjct: 1   MFGRAPKKSDNTKYYEVLGVSKNATPEDLKKAYRKAAIKNH 41


>sp|P43644|DNJH_ATRNU DnaJ protein homolog ANJ1 OS=Atriplex
           nummularia PE=2 SV=1
          Length = 417

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 20/41 (48%), Positives = 29/41 (70%)
 Frame = +2

Query: 194 MYGRRPAHRDNTKYDDVVGVPTACSADELNKAYRKAASVNH 316
           M+GR P   D+T+Y +++GVP   S ++L KAY+KAA  NH
Sbjct: 1   MFGRAPKKSDSTRYYEILGVPKDASPEDLKKAYKKAAIKNH 41


>sp|Q94AW8|DNAJ3_ARATH Chaperone protein dnaJ 3 OS=Arabidopsis
           thaliana GN=ATJ3 PE=1 SV=2
          Length = 420

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 21/42 (50%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
 Frame = +2

Query: 194 MYGRRPAHR-DNTKYDDVVGVPTACSADELNKAYRKAASVNH 316
           M+GR P+ + DNTK+ +++GVP + S ++L KAY+KAA  NH
Sbjct: 1   MFGRGPSKKSDNTKFYEILGVPKSASPEDLKKAYKKAAIKNH 42


>sp|Q04960|DNJH_CUCSA DnaJ protein homolog OS=Cucumis sativus
           GN=DNAJ1 PE=2 SV=1
          Length = 413

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 23/41 (56%), Positives = 28/41 (68%)
 Frame = +2

Query: 194 MYGRRPAHRDNTKYDDVVGVPTACSADELNKAYRKAASVNH 316
           M+GR P   DNTKY +++GV    S D+L KAYRKAA  NH
Sbjct: 1   MFGR-PKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNH 40


>sp|P42825|DNAJ2_ARATH Chaperone protein dnaJ 2 OS=Arabidopsis
           thaliana GN=ATJ2 PE=1 SV=2
          Length = 419

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 20/42 (47%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
 Frame = +2

Query: 194 MYGRRPAHR-DNTKYDDVVGVPTACSADELNKAYRKAASVNH 316
           M+GR P+ + DNTK+ +++GVP   + ++L KAY+KAA  NH
Sbjct: 1   MFGRGPSRKSDNTKFYEILGVPKTAAPEDLKKAYKKAAIKNH 42


>sp|O35824|DNJA2_RAT DnaJ homolog subfamily A member 2 OS=Rattus
           norvegicus GN=Dnaja2 PE=2 SV=1
          Length = 412

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +2

Query: 224 NTKYDDVVGVPTACSADELNKAYRKAASVNH 316
           +TK  D++GVP   S +EL KAYRK A   H
Sbjct: 6   DTKLYDILGVPPGASENELKKAYRKLAKEYH 36


>sp|Q9QYJ0|DNJA2_MOUSE DnaJ homolog subfamily A member 2 OS=Mus
           musculus GN=Dnaja2 PE=2 SV=1
          Length = 412

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +2

Query: 224 NTKYDDVVGVPTACSADELNKAYRKAASVNH 316
           +TK  D++GVP   S +EL KAYRK A   H
Sbjct: 6   DTKLYDILGVPPGASENELKKAYRKLAKEYH 36


>sp|O60884|DNJA2_HUMAN DnaJ homolog subfamily A member 2 OS=Homo
           sapiens GN=DNAJA2 PE=1 SV=1
          Length = 412

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +2

Query: 224 NTKYDDVVGVPTACSADELNKAYRKAASVNH 316
           +TK  D++GVP   S +EL KAYRK A   H
Sbjct: 6   DTKLYDILGVPPGASENELKKAYRKLAKEYH 36


>sp|Q2HJ94|DNJA2_BOVIN DnaJ homolog subfamily A member 2 OS=Bos
           taurus GN=DNAJA2 PE=2 SV=1
          Length = 412

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +2

Query: 224 NTKYDDVVGVPTACSADELNKAYRKAASVNH 316
           +TK  D++GVP   S +EL KAYRK A   H
Sbjct: 6   DTKLYDILGVPPGASENELKKAYRKLAKEYH 36


>sp|Q8CWT2|DNAJ_STRR6 Chaperone protein dnaJ OS=Streptococcus
           pneumoniae (strain ATCC BAA-255 / R6) GN=dnaJ PE=3 SV=1
          Length = 372

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +2

Query: 221 DNTKYDDVVGVPTACSADELNKAYRKAASVNH 316
           +NT++ D +GV    SADE+ KAYRK +   H
Sbjct: 2   NNTEFYDRLGVSKNASADEIKKAYRKLSKKYH 33
tr_hit_id Q9ZRE1
Definition tr|Q9ZRE1|Q9ZRE1_TOBAC NTFP1 (Fragment) OS=Nicotiana tabacum
Align length 41
Score (bit) 54.7
E-value 2.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958442|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0002_A06, 5'
         (318 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9ZRE1|Q9ZRE1_TOBAC NTFP1 (Fragment) OS=Nicotiana tabacum PE=...    55   2e-06
tr|O65160|O65160_MAIZE DnaJ protein OS=Zea mays GN=mdJ1 PE=2 SV=1      55   2e-06
tr|B8A362|B8A362_MAIZE Putative uncharacterized protein OS=Zea m...    55   2e-06
tr|B5G5H7|B5G5H7_SETIT DnaJ-like protein OS=Setaria italica PE=2...    55   2e-06
tr|Q9M7M2|Q9M7M2_SOLLC DnaJ-like protein OS=Solanum lycopersicum...    54   3e-06
tr|Q9FEG6|Q9FEG6_DAUCA J2P (J1P) OS=Daucus carota PE=2 SV=1            54   3e-06
tr|Q84PD0|Q84PD0_ORYSJ DnaJ protein OS=Oryza sativa subsp. japon...    54   3e-06
tr|Q53KN6|Q53KN6_ORYSJ DnaJ protein, putative (DnaJ protein, put...    54   3e-06
tr|A2XV12|A2XV12_ORYSI Putative uncharacterized protein OS=Oryza...    54   3e-06
tr|Q0GLI7|Q0GLI7_ALLPO Molecular chaperone DjA2 OS=Allium porrum...    54   5e-06
tr|A9TW48|A9TW48_PHYPA Predicted protein OS=Physcomitrella paten...    54   5e-06
tr|A9RML5|A9RML5_PHYPA Predicted protein OS=Physcomitrella paten...    54   5e-06
tr|Q6F3B0|Q6F3B0_ORYSJ Os03g0787300 protein OS=Oryza sativa subs...    53   9e-06
tr|B8AKY2|B8AKY2_ORYSI Putative uncharacterized protein OS=Oryza...    53   9e-06
tr|A2XMP7|A2XMP7_ORYSI Putative uncharacterized protein OS=Oryza...    53   9e-06
tr|Q9ZWK3|Q9ZWK3_SALGI DnaJ homolog OS=Salix gilgiana GN=SGJ3 PE...    52   1e-05
tr|B6U275|B6U275_MAIZE Heterogeneous nuclear ribonucleoprotein 2...    52   1e-05
tr|A3A9S3|A3A9S3_ORYSJ Putative uncharacterized protein OS=Oryza...    52   1e-05
tr|Q43177|Q43177_SOLTU DnaJ protein OS=Solanum tuberosum GN=dnaJ...    52   2e-05
tr|Q3HRX5|Q3HRX5_SOLTU DnaJ-like protein OS=Solanum tuberosum PE...    52   2e-05
tr|Q38HU8|Q38HU8_SOLTU DnaJ-like protein OS=Solanum tuberosum PE...    52   2e-05
tr|Q38HT9|Q38HT9_SOLTU DnaJ-like protein OS=Solanum tuberosum PE...    52   2e-05
tr|Q2XTC7|Q2XTC7_SOLTU DnaJ-like protein-like OS=Solanum tuberos...    52   2e-05
tr|A9SP23|A9SP23_PHYPA Predicted protein OS=Physcomitrella paten...    52   2e-05
tr|A9PG12|A9PG12_POPTR Putative uncharacterized protein OS=Popul...    52   2e-05
tr|Q949C1|Q949C1_ORYSA DnaJ-like protein OS=Oryza sativa GN=W930...    51   3e-05
tr|Q0DYZ8|Q0DYZ8_ORYSJ Os02g0656500 protein OS=Oryza sativa subs...    51   3e-05
tr|B8AG47|B8AG47_ORYSI Putative uncharacterized protein OS=Oryza...    51   3e-05
tr|O24074|O24074_MEDSA DnaJ-like protein (DnaJ-like protein MsJ1...    51   3e-05
tr|B7FID9|B7FID9_MEDTR Putative uncharacterized protein OS=Medic...    51   3e-05

>tr|Q9ZRE1|Q9ZRE1_TOBAC NTFP1 (Fragment) OS=Nicotiana tabacum PE=2
           SV=1
          Length = 70

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 24/41 (58%), Positives = 30/41 (73%)
 Frame = +2

Query: 194 MYGRRPAHRDNTKYDDVVGVPTACSADELNKAYRKAASVNH 316
           M+GR P   DNTKY +++GVP + S D+L KAYRKAA  NH
Sbjct: 1   MFGRTPKKSDNTKYYEILGVPKSASQDDLKKAYRKAAIKNH 41


>tr|O65160|O65160_MAIZE DnaJ protein OS=Zea mays GN=mdJ1 PE=2 SV=1
          Length = 419

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 24/41 (58%), Positives = 30/41 (73%)
 Frame = +2

Query: 194 MYGRRPAHRDNTKYDDVVGVPTACSADELNKAYRKAASVNH 316
           M+GR P   DNTKY +++GVP + S D+L KAYRKAA  NH
Sbjct: 1   MFGRAPKKSDNTKYYEILGVPKSASQDDLKKAYRKAAIKNH 41


>tr|B8A362|B8A362_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 419

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 24/41 (58%), Positives = 30/41 (73%)
 Frame = +2

Query: 194 MYGRRPAHRDNTKYDDVVGVPTACSADELNKAYRKAASVNH 316
           M+GR P   DNTKY +++GVP + S D+L KAYRKAA  NH
Sbjct: 1   MFGRAPKKSDNTKYYEILGVPKSASQDDLKKAYRKAAIKNH 41


>tr|B5G5H7|B5G5H7_SETIT DnaJ-like protein OS=Setaria italica PE=2
           SV=1
          Length = 419

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 24/41 (58%), Positives = 30/41 (73%)
 Frame = +2

Query: 194 MYGRRPAHRDNTKYDDVVGVPTACSADELNKAYRKAASVNH 316
           M+GR P   DNTKY +++GVP + S D+L KAYRKAA  NH
Sbjct: 1   MFGRAPKKSDNTKYYEILGVPKSASQDDLKKAYRKAAIKNH 41


>tr|Q9M7M2|Q9M7M2_SOLLC DnaJ-like protein OS=Solanum lycopersicum
           PE=2 SV=1
          Length = 419

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 24/41 (58%), Positives = 30/41 (73%)
 Frame = +2

Query: 194 MYGRRPAHRDNTKYDDVVGVPTACSADELNKAYRKAASVNH 316
           M+GR P   DNTKY +++GVP A S ++L KAYRKAA  NH
Sbjct: 1   MFGRAPKKSDNTKYYEILGVPKAASQEDLKKAYRKAAIKNH 41


>tr|Q9FEG6|Q9FEG6_DAUCA J2P (J1P) OS=Daucus carota PE=2 SV=1
          Length = 418

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = +2

Query: 194 MYGRRPAHRDNTKYDDVVGVPTACSADELNKAYRKAASVNH 316
           M+GR P   DNTKY +++GVP   S D+L KAYRKAA  NH
Sbjct: 1   MFGRAPKKSDNTKYYEILGVPKTASPDDLKKAYRKAAIKNH 41


>tr|Q84PD0|Q84PD0_ORYSJ DnaJ protein OS=Oryza sativa subsp. japonica
           GN=Os03g0648400 PE=2 SV=1
          Length = 417

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = +2

Query: 194 MYGRRPAHRDNTKYDDVVGVPTACSADELNKAYRKAASVNH 316
           M+GR P   DNTKY +++GVP   S D+L KAYRKAA  NH
Sbjct: 1   MFGRAPKKSDNTKYYEILGVPKTASQDDLKKAYRKAAIKNH 41


>tr|Q53KN6|Q53KN6_ORYSJ DnaJ protein, putative (DnaJ protein,
           putative, expressed) OS=Oryza sativa subsp. japonica
           GN=LOC_Os03g44620 PE=4 SV=1
          Length = 416

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = +2

Query: 194 MYGRRPAHRDNTKYDDVVGVPTACSADELNKAYRKAASVNH 316
           M+GR P   DNTKY +++GVP   S D+L KAYRKAA  NH
Sbjct: 1   MFGRAPKKSDNTKYYEILGVPKTASQDDLKKAYRKAAIKNH 41


>tr|A2XV12|A2XV12_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_16451 PE=4 SV=1
          Length = 417

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = +2

Query: 194 MYGRRPAHRDNTKYDDVVGVPTACSADELNKAYRKAASVNH 316
           M+GR P   DNTKY +++GVP   S D+L KAYRKAA  NH
Sbjct: 1   MFGRAPKKSDNTKYYEILGVPKTASQDDLKKAYRKAAIKNH 41


>tr|Q0GLI7|Q0GLI7_ALLPO Molecular chaperone DjA2 OS=Allium porrum
           PE=2 SV=1
          Length = 418

 Score = 53.5 bits (127), Expect = 5e-06
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = +2

Query: 194 MYGRRPAHRDNTKYDDVVGVPTACSADELNKAYRKAASVNH 316
           M+GR P   DNTKY +++GVP   S D+L KAYRKAA  NH
Sbjct: 1   MFGRAPKKSDNTKYYEILGVPKNASPDDLKKAYRKAAIKNH 41