BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958409|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0030_O21, 5'
         (618 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q99KG7|HPS4_MOUSE Hermansky-Pudlak syndrome 4 protein homolog...    31   4.5  
sp|P34468|YMH1_CAEEL Uncharacterized protein F58A4.1 OS=Caenorha...    31   5.9  
sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein...    30   7.7  
sp|P32323|AGA1_YEAST A-agglutinin anchorage subunit OS=Saccharom...    30   7.7  

>sp|Q99KG7|HPS4_MOUSE Hermansky-Pudlak syndrome 4 protein homolog
           OS=Mus musculus GN=Hps4 PE=1 SV=2
          Length = 671

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
 Frame = -2

Query: 305 ALQELAEIEYHL----PRDDTFLTQSTQSNLHFERILALCS 195
           +L  L  +E HL    PRD+  LT ST + LH++RI ++ S
Sbjct: 538 SLASLNGLEVHLKETLPRDEASLTSSTYNFLHYDRIQSVLS 578


>sp|P34468|YMH1_CAEEL Uncharacterized protein F58A4.1
           OS=Caenorhabditis elegans GN=F58A4.1 PE=2 SV=2
          Length = 254

 Score = 30.8 bits (68), Expect = 5.9
 Identities = 17/61 (27%), Positives = 35/61 (57%)
 Frame = +1

Query: 331 PFHITPSFLAASWASTSTCPSARKASNYAAASDFATVLLSSSCTATPTSCICATSSFVEV 510
           P H +PS   ++  STST  S  ++++    +  ++   +++ T+TPTS   AT++  ++
Sbjct: 92  PTHSSPSTSTSTSTSTSTSTSTSRSTSTVTPTTRSST--TTTATSTPTSSSKATTTSAQI 149

Query: 511 T 513
           T
Sbjct: 150 T 150


>sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein 13
            OS=Homo sapiens GN=ZC3H13 PE=1 SV=1
          Length = 1668

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +1

Query: 370  ASTSTCPSARKASNYAAASDFATVLLSSSCTATPTS 477
            A+ +T P+   A+  AAA+ F+T  ++ S +ATPT+
Sbjct: 1110 ATATTVPATLAATTAAAATSFSTSAITISTSATPTN 1145


>sp|P32323|AGA1_YEAST A-agglutinin anchorage subunit
           OS=Saccharomyces cerevisiae GN=AGA1 PE=1 SV=1
          Length = 725

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 20/61 (32%), Positives = 35/61 (57%)
 Frame = +1

Query: 349 SFLAASWASTSTCPSARKASNYAAASDFATVLLSSSCTATPTSCICATSSFVEVTCTADA 528
           S  + S +STST PS+   S+ + ++  ++   SSS T+T  S   +TS+   +T T+ +
Sbjct: 187 SSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPS---STSTSSSLTSTSSS 243

Query: 529 S 531
           S
Sbjct: 244 S 244

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958409|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0030_O21, 5'
         (618 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A2QR94|A2QR94_ASPNC Similarity to hypothetical endoglucanase ...    37   1.2  
tr|A9V579|A9V579_MONBE Predicted protein OS=Monosiga brevicollis...    36   1.6  
tr|Q0T300|Q0T300_SHIF8 Hypothetical bacteriophage protein OS=Shi...    35   3.6  
tr|Q8V0K8|Q8V0K8_9ALPH Glycoprotein gp2 (Fragment) OS=Equid herp...    35   4.7  
tr|B0RI38|B0RI38_CLAMS Putative long chain fatty acid CoA ligase...    35   4.7  
tr|A5CS69|A5CS69_CLAM3 Putative long-chain-fatty-acid-CoA ligase...    35   4.7  
tr|Q0JAK8|Q0JAK8_ORYSJ Os04g0592300 protein OS=Oryza sativa subs...    34   7.9  

>tr|A2QR94|A2QR94_ASPNC Similarity to hypothetical endoglucanase IV
           - Trichoderma reesei OS=Aspergillus niger (strain CBS
           513.88 / FGSC A1513) GN=An08g05230 PE=3 SV=1
          Length = 402

 Score = 36.6 bits (83), Expect = 1.2
 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = +1

Query: 358 AASWASTSTCPSARKASNYAAASDFATVLLSSSCTATPT-SCICATSSFVEVTCTADASI 534
           A S +S+S   S   +++ AAA+   T   S+S  +TPT S   ATSS V  T TA A++
Sbjct: 247 ATSSSSSSGSSSGASSTSSAAAAAATTSSASTSSASTPTTSAAAATSSAVSATTTAAAAV 306

Query: 535 V 537
           V
Sbjct: 307 V 307


>tr|A9V579|A9V579_MONBE Predicted protein OS=Monosiga brevicollis
           GN=27416 PE=4 SV=1
          Length = 788

 Score = 36.2 bits (82), Expect = 1.6
 Identities = 19/64 (29%), Positives = 38/64 (59%)
 Frame = +1

Query: 343 TPSFLAASWASTSTCPSARKASNYAAASDFATVLLSSSCTATPTSCICATSSFVEVTCTA 522
           +P+  +++ A+ +T PS   +S+ + +S  +T   +S+ T+T  + + +TSS    T T 
Sbjct: 270 SPATGSSTPANVNTSPSTSTSSSTSTSSSTSTSTSTSTSTSTSITTVSSTSSSTSTTTTP 329

Query: 523 DASI 534
           DAS+
Sbjct: 330 DASL 333


>tr|Q0T300|Q0T300_SHIF8 Hypothetical bacteriophage protein
           OS=Shigella flexneri serotype 5b (strain 8401)
           GN=SFV_2195 PE=4 SV=1
          Length = 164

 Score = 35.0 bits (79), Expect = 3.6
 Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +1

Query: 331 PFHITPSFLAASWASTSTCPSARKASNYAA-ASDFATVLLSSSCTATPTSCICATSSFVE 507
           PF +    LA+S  +TS   SAR A+  A  A+DFA +LL ++  A P   +    + V 
Sbjct: 47  PFFVV---LASSRDTTSAISSARFAAVSARIAADFAALLLCAAAVALPADSVALEDAVVA 103

Query: 508 VTCTADASIV 537
           +   ADA +V
Sbjct: 104 LPFAADACLV 113


>tr|Q8V0K8|Q8V0K8_9ALPH Glycoprotein gp2 (Fragment) OS=Equid
           herpesvirus 4 PE=4 SV=1
          Length = 291

 Score = 34.7 bits (78), Expect = 4.7
 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +1

Query: 349 SFLAASWASTSTCPSARKASNYAAASDFATVLLSSSCTATPTSCICATSSFVEVTC--TA 522
           S  A S A+TST  ++  A++ AA S  AT   +++  ATPT    A+S+    T   TA
Sbjct: 120 STAATSTAATSTAATSTAATSTAATSTAATTTAATTTAATPTESSEASSTLAATTADTTA 179

Query: 523 DAS 531
           D +
Sbjct: 180 DTT 182


>tr|B0RI38|B0RI38_CLAMS Putative long chain fatty acid CoA ligase
           OS=Clavibacter michiganensis subsp. sepedonicus (strain
           ATCC 33113 / JCM 9667) GN=CMS1354 PE=3 SV=1
          Length = 608

 Score = 34.7 bits (78), Expect = 4.7
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = +1

Query: 409 NYAAASDFATVLLSSSCTATPTSCICATSSFVEVTCTADASI 534
           N A  SD AT++ +S  T  P  CI   ++FVE++  A+ ++
Sbjct: 174 NIAVGSDMATLIYTSGTTGRPKGCILTHANFVELSRNAEVAM 215


>tr|A5CS69|A5CS69_CLAM3 Putative long-chain-fatty-acid-CoA ligase
           OS=Clavibacter michiganensis subsp. michiganensis
           (strain NCPPB 382) GN=CMM_1877 PE=3 SV=1
          Length = 608

 Score = 34.7 bits (78), Expect = 4.7
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = +1

Query: 409 NYAAASDFATVLLSSSCTATPTSCICATSSFVEVTCTADASI 534
           N A  SD AT++ +S  T  P  CI   ++FVE++  A+ ++
Sbjct: 174 NIAVGSDMATLIYTSGTTGRPKGCILTHANFVELSRNAEVAM 215


>tr|Q0JAK8|Q0JAK8_ORYSJ Os04g0592300 protein OS=Oryza sativa subsp.
           japonica GN=Os04g0592300 PE=4 SV=1
          Length = 162

 Score = 33.9 bits (76), Expect = 7.9
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
 Frame = +1

Query: 358 AASWASTSTCPSARKASNYAAASDFATVLLSSSCTATPTSCICA-----TSSFVEVTCTA 522
           +++W S +   S   AS+Y A S  +TV  S++ +A+   C+ A     +SS + + C+A
Sbjct: 42  SSAWVSAAFLASIASASSYLACSSCSTVERSAAMSASCWLCMLASFVRSSSSMLALACSA 101

Query: 523 DAS 531
            AS
Sbjct: 102 SAS 104