DK958199 |
Clone id |
TST39A01NGRL0030_G01 |
Library |
TST39 |
Length |
616 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0030_G01. 5' end sequence. |
Accession |
DK958199 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
ATGCAATGAAAGTGCTTTTGAAACCAAACATGTGATGGAAGCTTCCCACACAGCCGTTGA AATCAAGATCAAGACCTTGGATTCTCAAGTCTACACTTGCCGAGTTGAGAAGAATGTTTC TGTTCCTGACTTAAAGGAGCAAGTAGCACTTGTAACAGGTGTACCATCAGGAAGTCAACG CTTGATTTGTCGTGGGAAGGTGCTCAAGGATGAACATGCTCTGTCAGCATATGAGGTGGA AGATGGACATACTCTTCACTTGGTGACGAGGCCAGCACCACCACCATTGGTACCAACTGC TTCTACAGGAGCCCAGATTGAGGAACAAGAATCTCATGAATACTTGTCCTACAACAGACC TGGACACATTTCTCACAGTGTCTTGGTTGGGACGTTCAACTTTCCAGATCGTGGCAATGT CGTTTTACCTGAGATTAACAGAATATTTTCATCTGTGTTGAGCTCACTTCGGGTTGGAAG CTACTTTCCACCAACTTTGGGGGCTGGAAATGGAAACTCAGCTCCTCTTCAACACACTGC AAATGTATTCAATGGTGGCCAAGAAAGAGAAGAACATACTGATCCTATATCGGAGCAAAG AGTGGCTGATCAGGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6MG49 |
Definition |
sp|Q6MG49|BAT3_RAT Large proline-rich protein BAT3 OS=Rattus norvegicus |
Align length |
150 |
Score (bit) |
76.6 |
E-value |
9.0e-14 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T8C6 |
Definition |
tr|A9T8C6|A9T8C6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
157 |
Score (bit) |
166.0 |
E-value |
8.0e-40 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958199|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0030_G01, 5' (616 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T8C6|A9T8C6_PHYPA Predicted protein OS=Physcomitrella paten... 166 8e-40 tr|A9RPN9|A9RPN9_PHYPA Predicted protein OS=Physcomitrella paten... 166 8e-40 tr|A7QS28|A7QS28_VITVI Chromosome undetermined scaffold_155, who... 132 2e-29 tr|Q9FH07|Q9FH07_ARATH Arabidopsis thaliana genomic DNA, chromos... 125 2e-27 tr|Q8L745|Q8L745_ARATH AT5g42220/K5J14_2 OS=Arabidopsis thaliana... 125 2e-27 tr|A7P609|A7P609_VITVI Chromosome chr4 scaffold_6, whole genome ... 122 1e-26 tr|A7R2A7|A7R2A7_VITVI Chromosome undetermined scaffold_411, who... 116 9e-25 tr|B8B9B8|B8B9B8_ORYSI Putative uncharacterized protein OS=Oryza... 105 3e-21 tr|A3BRN9|A3BRN9_ORYSJ Putative uncharacterized protein OS=Oryza... 105 3e-21 tr|Q84UT7|Q84UT7_ORYSA Calreticulin interacted protein OS=Oryza ... 94 8e-18 tr|Q0D698|Q0D698_ORYSJ Os07g0498800 protein OS=Oryza sativa subs... 94 8e-18 tr|B6U0P5|B6U0P5_MAIZE Ubiquitin family protein OS=Zea mays PE=2... 93 1e-17 tr|Q69VS3|Q69VS3_ORYSJ Putative calreticulin interacted protein ... 92 2e-17 tr|B8B6E2|B8B6E2_ORYSI Putative uncharacterized protein OS=Oryza... 92 2e-17 tr|Q498N5|Q498N5_RAT HLA-B-associated transcript 3 OS=Rattus nor... 77 1e-12 tr|Q8HWH4|Q8HWH4_MOUSE Bat3 protein (Fragment) OS=Mus musculus G... 76 1e-12 tr|Q3TDL4|Q3TDL4_MOUSE Putative uncharacterized protein (Fragmen... 76 1e-12 tr|Q0V8E0|Q0V8E0_BOVIN HLA-B associated transcript-3 OS=Bos taur... 76 2e-12 tr|Q5STC0|Q5STC0_HUMAN HLA-B associated transcript 3 (Fragment) ... 76 2e-12 tr|Q5STB9|Q5STB9_HUMAN HLA-B associated transcript 3 (Fragment) ... 76 2e-12 tr|Q5SRP7|Q5SRP7_HUMAN HLA-B associated transcript 3 (Fragment) ... 76 2e-12 tr|Q5SQ40|Q5SQ40_HUMAN HLA-B associated transcript 3 (Fragment) ... 76 2e-12 tr|Q5SQ39|Q5SQ39_HUMAN HLA-B associated transcript 3 (Fragment) ... 76 2e-12 tr|B4DZ12|B4DZ12_HUMAN cDNA FLJ60983, highly similar to Large pr... 76 2e-12 tr|B1B0K3|B1B0K3_HUMAN HLA-B associated transcript 3 (Fragment) ... 76 2e-12 tr|B1B0K1|B1B0K1_HUMAN HLA-B associated transcript 3 (Fragment) ... 76 2e-12 tr|B1B0K0|B1B0K0_HUMAN HLA-B associated transcript 3 (Fragment) ... 76 2e-12 tr|B1B0J9|B1B0J9_HUMAN HLA-B associated transcript 3 (Fragment) ... 76 2e-12 tr|B1B0J8|B1B0J8_HUMAN HLA-B associated transcript 3 (Fragment) ... 76 2e-12 tr|B1B0J4|B1B0J4_HUMAN HLA-B associated transcript 3 (Fragment) ... 76 2e-12
>tr|A9T8C6|A9T8C6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_168608 PE=4 SV=1 Length = 1132
Score = 166 bits (421), Expect = 8e-40 Identities = 91/157 (57%), Positives = 109/157 (69%), Gaps = 1/157 (0%) Frame = +2
Query: 56 VEIKIKTLDSQVYTCRVEKNVSVPDLKEQVALVTGVPSGSQRLICRGKVLKDEHALSAYE 235 VEIKIKTLDSQ YT RVEKNV+VP LKEQ+A V GVP +QRLICRGKVLKD+ LSAY Sbjct: 92 VEIKIKTLDSQSYTLRVEKNVAVPVLKEQLASVAGVPVENQRLICRGKVLKDDQLLSAYN 151
Query: 236 VEDGHTLHLVTRPAPPPLVPTASTGAQIEEQESHEYLSY-NRPGHISHSVLVGTFNFPDR 412 VEDGHTLHLV R PP ST +Q S +R GH+SHS+L+GT NFPD Sbjct: 152 VEDGHTLHLVARQPPPTSGVGTSTATNEGDQGETGLPSLGSRSGHVSHSLLMGTINFPDN 211
Query: 413 GNVVLPEINRIFSSVLSSLRVGSYFPPTLGAGNGNSA 523 G LP++NRI ++V+SS+ + S P G GN ++A Sbjct: 212 GEGQLPDLNRIINAVISSIGLHSGAPLQGGTGNNSAA 248
>tr|A9RPN9|A9RPN9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_160402 PE=4 SV=1 Length = 1091
Score = 166 bits (421), Expect = 8e-40 Identities = 94/179 (52%), Positives = 117/179 (65%), Gaps = 3/179 (1%) Frame = +2
Query: 56 VEIKIKTLDSQVYTCRVEKNVSVPDLKEQVALVTGVPSGSQRLICRGKVLKDEHALSAYE 235 VEI+IKTLDSQ YT RV+KNV+VP LKEQ+A V+GVP +QRLICRGKVLKD+ LSAY Sbjct: 28 VEIRIKTLDSQSYTLRVDKNVAVPALKEQLATVSGVPVENQRLICRGKVLKDDQLLSAYN 87
Query: 236 VEDGHTLHLVTRPAPPPLVPTASTGAQIEEQESHEYL--SYNRPGHISHSVLVGTFNFPD 409 VEDGHTLHLV R PPP + A E + L S NR GH+SHS+L+GT NFPD Sbjct: 88 VEDGHTLHLVAR-QPPPSSGVGQSSASNEGGQGETGLPSSGNRSGHVSHSLLMGTINFPD 146
Query: 410 RGNVVLPEINRIFSSVLSSLRVGSYFPPTLGAGNGNSAPLQHT-ANVFNGGQEREEHTD 583 G LP++NRI ++V+SS+ + P GN +S + T V G +R +D Sbjct: 147 NGEGQLPDLNRILNAVISSIGLHGNVPSQGSTGNNSSTGVLPTPTGVHAGAPDRNGASD 205
>tr|A7QS28|A7QS28_VITVI Chromosome undetermined scaffold_155, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00005651001 PE=4 SV=1 Length = 744
Score = 132 bits (332), Expect = 2e-29 Identities = 72/141 (51%), Positives = 92/141 (65%), Gaps = 1/141 (0%) Frame = +2
Query: 56 VEIKIKTLDSQVYTCRVEKNVSVPDLKEQVALVTGVPSGSQRLICRGKVLKDEHALSAYE 235 +EIKIKTLDSQ YT RV K V VPDLK+Q+A VTGV S QRLICRGKVLKD+ L AY Sbjct: 17 IEIKIKTLDSQTYTMRVNKQVPVPDLKQQIATVTGVLSDQQRLICRGKVLKDDQRLCAYH 76
Query: 236 VEDGHTLHLVTRPAPPPLVPTASTGAQIEEQESHEY-LSYNRPGHISHSVLVGTFNFPDR 412 VEDGHTLHLVTR PP +S G+ + +S+ + ++ L N P++ Sbjct: 77 VEDGHTLHLVTRQPVPP----SSEGSHNQSDAIPGLGMSHGQDNQVAPGFLPENLNVPNQ 132
Query: 413 GNVVLPEINRIFSSVLSSLRV 475 G+ + PEIN++ S+VL + V Sbjct: 133 GDAIPPEINQLVSAVLGAFGV 153
>tr|Q9FH07|Q9FH07_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K5J14 OS=Arabidopsis thaliana PE=4 SV=1 Length = 902
Score = 125 bits (314), Expect = 2e-27 Identities = 72/183 (39%), Positives = 106/183 (57%), Gaps = 3/183 (1%) Frame = +2
Query: 5 NESAFETKHVMEASHTAVEIKIKTLDSQVYTCRVEKNVSVPDLKEQVALVTGVPSGSQRL 184 N+ + T + + +E+ IKTLDS+ YT +V KN +V KE++A TGVP G QRL Sbjct: 30 NQCSSSTNASEKTPESTLELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRL 89
Query: 185 ICRGKVLKDEHALSAYEVEDGHTLHLVTR-PA-PPPLVPTASTGAQIEEQESHEYLSYNR 358 I RG+VLKD+H LS Y +E+GHTLHL+ R PA P T S GA + + Sbjct: 90 IFRGRVLKDDHPLSEYHLENGHTLHLIVRQPAESAPSSGTPSQGATANDGNNTNGGPSRN 149
Query: 359 PGHISHSVLVGTFNFPDRGNVVLPEINRIFSSVLSSLRVGSYFPPTLGA-GNGNSAPLQH 535 H+SHSV++G+FN D+ ++P+++R+ +VL+S V P G +S P Sbjct: 150 GRHVSHSVVLGSFNVGDQTEGIVPDLSRVIGAVLNSFGVSGQLPTNHSTNGTQSSMPSNQ 209
Query: 536 TAN 544 ++N Sbjct: 210 SSN 212
>tr|Q8L745|Q8L745_ARATH AT5g42220/K5J14_2 OS=Arabidopsis thaliana GN=At5g42220 PE=2 SV=1 Length = 879
Score = 125 bits (314), Expect = 2e-27 Identities = 72/183 (39%), Positives = 106/183 (57%), Gaps = 3/183 (1%) Frame = +2
Query: 5 NESAFETKHVMEASHTAVEIKIKTLDSQVYTCRVEKNVSVPDLKEQVALVTGVPSGSQRL 184 N+ + T + + +E+ IKTLDS+ YT +V KN +V KE++A TGVP G QRL Sbjct: 7 NQCSSSTNASEKTPESTLELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRL 66
Query: 185 ICRGKVLKDEHALSAYEVEDGHTLHLVTR-PA-PPPLVPTASTGAQIEEQESHEYLSYNR 358 I RG+VLKD+H LS Y +E+GHTLHL+ R PA P T S GA + + Sbjct: 67 IFRGRVLKDDHPLSEYHLENGHTLHLIVRQPAESAPSSGTPSQGATANDGNNTNGGPSRN 126
Query: 359 PGHISHSVLVGTFNFPDRGNVVLPEINRIFSSVLSSLRVGSYFPPTLGA-GNGNSAPLQH 535 H+SHSV++G+FN D+ ++P+++R+ +VL+S V P G +S P Sbjct: 127 GRHVSHSVVLGSFNVGDQTEGIVPDLSRVIGAVLNSFGVSGQLPTNHSTNGTQSSMPSNQ 186
Query: 536 TAN 544 ++N Sbjct: 187 SSN 189
>tr|A7P609|A7P609_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032737001 PE=4 SV=1 Length = 573
Score = 122 bits (307), Expect = 1e-26 Identities = 76/163 (46%), Positives = 99/163 (60%) Frame = +2
Query: 38 EASHTAVEIKIKTLDSQVYTCRVEKNVSVPDLKEQVALVTGVPSGSQRLICRGKVLKDEH 217 + S VEIKIKTLDSQ YT RV+K + VP LKEQ+A VTGV S QRLICRG+VLKD+ Sbjct: 18 QCSEATVEIKIKTLDSQTYTLRVDKCMPVPALKEQIASVTGVLSEQQRLICRGRVLKDDQ 77
Query: 218 ALSAYEVEDGHTLHLVTRPAPPPLVPTASTGAQIEEQESHEYLSYNRPGHISHSVLVGTF 397 LSAY VEDGHTLHLV R P P++ + + N+ H+ SV+V Sbjct: 78 LLSAYHVEDGHTLHLVVR---QPFPPSSESLPDNSATDPASNTLRNQGFHVGSSVVV--- 131
Query: 398 NFPDRGNVVLPEINRIFSSVLSSLRVGSYFPPTLGAGNGNSAP 526 ++G+ V P+++RI S+VLSS V + + GA + P Sbjct: 132 -LSEQGDGV-PDLSRIVSAVLSSFGVNNVRSGSEGADPRDPVP 172
>tr|A7R2A7|A7R2A7_VITVI Chromosome undetermined scaffold_411, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00012892001 PE=4 SV=1 Length = 903
Score = 116 bits (291), Expect = 9e-25 Identities = 66/163 (40%), Positives = 95/163 (58%), Gaps = 6/163 (3%) Frame = +2
Query: 38 EASHTAVEIKIKTLDSQVYTCRVEKNVSVPDLKEQVALVTGVPSGSQRLICRGKVLKDEH 217 + S + VE+ +KTLDS++++ V+KN+ V KE++A GVP QRLI RGKVLKD+ Sbjct: 18 DCSESTVELNVKTLDSRIHSFHVDKNLPVSLFKEKIANEIGVPVEQQRLIFRGKVLKDDQ 77
Query: 218 ALSAYEVEDGHTLHLVTRPAPPPLVPTASTGAQIEEQESHEYLSYN------RPGHISHS 379 L+ Y VE+GHTLHLV R P S+G E + N R G ISHS Sbjct: 78 LLAEYHVENGHTLHLVAR---DPTQSQPSSGQSSGETNGNNGNDANAGGPRARVGQISHS 134
Query: 380 VLVGTFNFPDRGNVVLPEINRIFSSVLSSLRVGSYFPPTLGAG 508 V++GTFN ++ ++P++ R+ +VL+S +GS T G Sbjct: 135 VVLGTFNVGEQAEGIVPDLTRVIGAVLNSFGIGSQTTNTATGG 177
>tr|B8B9B8|B8B9B8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28673 PE=4 SV=1 Length = 609
Score = 105 bits (261), Expect = 3e-21 Identities = 52/76 (68%), Positives = 59/76 (77%) Frame = +2
Query: 44 SHTAVEIKIKTLDSQVYTCRVEKNVSVPDLKEQVALVTGVPSGSQRLICRGKVLKDEHAL 223 S + +EIKIKTLDSQ Y RV K V VP LKE++A VTG+ S QRLICRG+VLKD+ L Sbjct: 34 SESTIEIKIKTLDSQTYNLRVNKRVPVPLLKEKIATVTGILSEQQRLICRGRVLKDDELL 93
Query: 224 SAYEVEDGHTLHLVTR 271 SAY VEDGHTLHLV R Sbjct: 94 SAYHVEDGHTLHLVVR 109
>tr|A3BRN9|A3BRN9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_025711 PE=4 SV=1 Length = 710
Score = 105 bits (261), Expect = 3e-21 Identities = 52/76 (68%), Positives = 59/76 (77%) Frame = +2
Query: 44 SHTAVEIKIKTLDSQVYTCRVEKNVSVPDLKEQVALVTGVPSGSQRLICRGKVLKDEHAL 223 S + +EIKIKTLDSQ Y RV K V VP LKE++A VTG+ S QRLICRG+VLKD+ L Sbjct: 109 SESTIEIKIKTLDSQTYNLRVNKRVPVPLLKEKIATVTGILSEQQRLICRGRVLKDDELL 168
Query: 224 SAYEVEDGHTLHLVTR 271 SAY VEDGHTLHLV R Sbjct: 169 SAYHVEDGHTLHLVVR 184
>tr|Q84UT7|Q84UT7_ORYSA Calreticulin interacted protein OS=Oryza sativa GN=CRTintP PE=2 SV=1 Length = 966
Score = 93.6 bits (231), Expect = 8e-18 Identities = 68/169 (40%), Positives = 90/169 (53%), Gaps = 3/169 (1%) Frame = +2
Query: 56 VEIKIKTLDSQVYTCRVEKNVSVPDLKEQVALVTGVPSGSQRLICRGKVLKDEHALSAYE 235 +EI IKTLDSQV+ RV+KNV V LKE++ TGVP QRLI RG+VLKD+H LS Y Sbjct: 24 IEINIKTLDSQVHKLRVKKNVPVLVLKEKIVEATGVPVDQQRLIFRGRVLKDDHLLSEYH 83
Query: 236 VEDGHTLHLVTRPAPPPLVPTASTGAQIEEQESHEYLSYN-RPGHISHSV--LVGTFNFP 406 +EDG+TLHLV R A S+G E ++ ++ N G IS SV ++G+ Sbjct: 84 LEDGYTLHLVARRAAAE--GQHSSGTSDENTHANVNVAGNGLLGDISRSVRDILGSLGLA 141
Query: 407 DRGNVVLPEINRIFSSVLSSLRVGSYFPPTLGAGNGNSAPLQHTANVFN 553 G + N FS L++ P NG + P H F+ Sbjct: 142 TPGGMT----NTTFSVPLTTA------PKGANNVNGRTQPGNHAQPGFS 180
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