DK958183 |
Clone id |
TST39A01NGRL0030_F09 |
Library |
TST39 |
Length |
612 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0030_F09. 5' end sequence. |
Accession |
DK958183 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CCATAGCCATGTTAGAACAGTTGCTCATCTTCACGCGGGGCGGCCTCATACTATGGACCT ATAAGGAGCTCGCCAATGCTTTGCGGGGTTCGCCCATCGACGCCCTCATAACATCTTGCC TCCTCGAGGATCGCTCTGCCCTAACTTCTTTCCAATATGATGCGGCAGGTTGCTCTTACA CGCTCAAATGGAGCTTCCATAACGACCTCGGCCTCGTCTTTGTTGCCGTTTACAGGAAAA TTCTTCACCTCCTGTATGTTGATGATCTCCTAGACGAGGTAAAACAGGAATTTTCACCGC TGTACAACGCTGAGAAGACAAACTATCCGAATTTCAATGATACGTTTCGACAGCTTCTGC TTGAAGCGGAGGCACGTGCAGAGGAGCTTCGCAAAGCGAAGCAGGCAAAGCCTGCTGTTA TAGATGGGTTGAAGCGAACTGCAGGGGACAGGAGAGGGTCGAAATCGTCATCTGGGATAT TGCAAGATGGAGCCAAGGCAGATGAGGATGGGGGCAAAGGCAGCAAAAACGAGCATGGTA ATGGATCTGTTGTATCTTCTCGTCACGAGAATGGGTCTGCATTGCCATACCATGGTAATG GATCTGCACATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54ZR7 |
Definition |
sp|Q54ZR7|SRPR_DICDI Signal recognition particle receptor subunit alpha OS=Dictyostelium discoideum |
Align length |
99 |
Score (bit) |
98.2 |
E-value |
3.0e-20 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9M0A0 |
Definition |
tr|Q9M0A0|Q9M0A0_ARATH Signal recognition particle receptor-like protein (AT4g30600/F17I23_60) OS=Arabidopsis thaliana |
Align length |
113 |
Score (bit) |
171.0 |
E-value |
4.0e-41 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958183|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0030_F09, 5' (612 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9M0A0|Q9M0A0_ARATH Signal recognition particle receptor-like... 171 4e-41 tr|A7PFQ9|A7PFQ9_VITVI Chromosome chr11 scaffold_14, whole genom... 169 9e-41 tr|A9TQP8|A9TQP8_PHYPA Predicted protein OS=Physcomitrella paten... 157 6e-37 tr|B4F9Q4|B4F9Q4_MAIZE Putative uncharacterized protein OS=Zea m... 145 1e-33 tr|Q6Z246|Q6Z246_ORYSJ Os08g0480100 protein OS=Oryza sativa subs... 136 1e-30 tr|A2YWB0|A2YWB0_ORYSI Putative uncharacterized protein OS=Oryza... 136 1e-30 tr|A3BU59|A3BU59_ORYSJ Putative uncharacterized protein OS=Oryza... 134 3e-30 tr|A9SLT4|A9SLT4_PHYPA Predicted protein OS=Physcomitrella paten... 128 2e-28 tr|Q6Z245|Q6Z245_ORYSJ Putative signal recognition particle rece... 109 1e-22 tr|A8IS72|A8IS72_CHLRE Alpha subunit of the SRP receptor OS=Chla... 105 3e-21 tr|Q4PF71|Q4PF71_USTMA Putative uncharacterized protein OS=Ustil... 80 7e-14 tr|B6L3I9|B6L3I9_BRAFL Putative uncharacterized protein OS=Branc... 79 3e-13 tr|B6L3I0|B6L3I0_BRAFL Putative uncharacterized protein OS=Branc... 79 3e-13 tr|B0WDS3|B0WDS3_CULQU Signal recognition particle receptor subu... 77 6e-13 tr|Q9CVL8|Q9CVL8_MOUSE Putative uncharacterized protein (Fragmen... 77 8e-13 tr|Q3KRC3|Q3KRC3_RAT Signal recognition particle receptor ('dock... 77 8e-13 tr|Q5RAC7|Q5RAC7_PONAB Putative uncharacterized protein DKFZp459... 77 8e-13 tr|Q6IAX9|Q6IAX9_HUMAN SRPR protein OS=Homo sapiens GN=SRPR PE=2... 77 8e-13 tr|Q5F390|Q5F390_CHICK Putative uncharacterized protein OS=Gallu... 75 3e-12 tr|Q178J5|Q178J5_AEDAE Signal recognition particle receptor alph... 74 7e-12 tr|Q7XY65|Q7XY65_GRIJA Signal recognition particle receptor-like... 73 1e-11 tr|Q0N2R5|Q0N2R5_BOMMO Signal recognition particle receptor alph... 73 1e-11 tr|A7RR36|A7RR36_NEMVE Predicted protein OS=Nematostella vectens... 73 1e-11 tr|B0D3U5|B0D3U5_LACBS Predicted protein OS=Laccaria bicolor (st... 71 4e-11 tr|Q4SEI0|Q4SEI0_TETNG Chromosome undetermined SCAF14620, whole ... 71 6e-11 tr|A8NFX6|A8NFX6_COPC7 Putative uncharacterized protein OS=Copri... 70 7e-11 tr|B3SCE0|B3SCE0_TRIAD Putative uncharacterized protein OS=Trich... 69 2e-10 tr|A7UVV7|A7UVV7_NEUCR Putative uncharacterized protein OS=Neuro... 69 2e-10 tr|A6R647|A6R647_AJECN Putative uncharacterized protein OS=Ajell... 69 2e-10 tr|Q7PSJ1|Q7PSJ1_ANOGA AGAP010894-PA OS=Anopheles gambiae GN=AGA... 69 3e-10
>tr|Q9M0A0|Q9M0A0_ARATH Signal recognition particle receptor-like protein (AT4g30600/F17I23_60) OS=Arabidopsis thaliana GN=At4g30600 PE=2 SV=1 Length = 634
Score = 171 bits (432), Expect = 4e-41 Identities = 81/113 (71%), Positives = 95/113 (84%) Frame = +3
Query: 9 MLEQLLIFTRGGLILWTYKELANALRGSPIDALITSCLLEDRSALTSFQYDAAGCSYTLK 188 MLEQLLIFTRGGLILWT KE+ NAL+GSPID LI SCLLE+RS SF YDA G +YTLK Sbjct: 1 MLEQLLIFTRGGLILWTCKEIGNALKGSPIDTLIRSCLLEERSGAVSFNYDAPGAAYTLK 60
Query: 189 WSFHNDLGLVFVAVYRKILHLLYVDDLLDEVKQEFSPLYNAEKTNYPNFNDTF 347 W+FHNDLGLVFVAVY++ILHLLYVDDLL VKQ FS +Y+ ++ Y +F++TF Sbjct: 61 WTFHNDLGLVFVAVYQRILHLLYVDDLLSMVKQSFSEVYDPKRMAYDDFDETF 113
>tr|A7PFQ9|A7PFQ9_VITVI Chromosome chr11 scaffold_14, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017205001 PE=4 SV=1 Length = 616
Score = 169 bits (429), Expect = 9e-41 Identities = 80/113 (70%), Positives = 97/113 (85%) Frame = +3
Query: 9 MLEQLLIFTRGGLILWTYKELANALRGSPIDALITSCLLEDRSALTSFQYDAAGCSYTLK 188 MLEQLLIFTRGGLILWT KEL NAL+GSPID LI SCLLE+RS S+ YDA G +YTLK Sbjct: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
Query: 189 WSFHNDLGLVFVAVYRKILHLLYVDDLLDEVKQEFSPLYNAEKTNYPNFNDTF 347 W+FHN+LGLVFVAVY++ILHLLYVDDLL +K+EFS +Y+ ++T Y +F++TF Sbjct: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMLKREFSVIYDPKRTAYDDFDETF 113
>tr|A9TQP8|A9TQP8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_95896 PE=4 SV=1 Length = 633
Score = 157 bits (396), Expect = 6e-37 Identities = 73/113 (64%), Positives = 95/113 (84%) Frame = +3
Query: 9 MLEQLLIFTRGGLILWTYKELANALRGSPIDALITSCLLEDRSALTSFQYDAAGCSYTLK 188 MLEQ LIFTRGGL+LW+ E+ AL+GSP+DALI +CLLE+R+ +SFQYDAAG YTLK Sbjct: 1 MLEQFLIFTRGGLVLWSCLEVGKALKGSPVDALIKTCLLEERAGDSSFQYDAAGAGYTLK 60
Query: 189 WSFHNDLGLVFVAVYRKILHLLYVDDLLDEVKQEFSPLYNAEKTNYPNFNDTF 347 W FHN+LGLVFVAVY+++LHLLYVD+LL++V +EFS L+ +T Y +F+DT+ Sbjct: 61 WRFHNELGLVFVAVYQRMLHLLYVDELLEKVMREFSILFVPTRTVYHDFDDTY 113
>tr|B4F9Q4|B4F9Q4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 625
Score = 145 bits (367), Expect = 1e-33 Identities = 76/115 (66%), Positives = 91/115 (79%), Gaps = 2/115 (1%) Frame = +3
Query: 9 MLEQLLIFTRGGLILWTYKEL--ANALRGSPIDALITSCLLEDRSALTSFQYDAAGCSYT 182 MLE+LLIFTRGGLILW+ A AL+GSPIDALI SCLLE+RSA SF D +Y Sbjct: 1 MLEELLIFTRGGLILWSSCRALGAAALKGSPIDALIRSCLLEERSADASFSQD----NYA 56
Query: 183 LKWSFHNDLGLVFVAVYRKILHLLYVDDLLDEVKQEFSPLYNAEKTNYPNFNDTF 347 LKW+FHNDLGLVFVAVY+KILHLLYVDDLL V++EFS +Y+ ++T+Y +F D F Sbjct: 57 LKWTFHNDLGLVFVAVYQKILHLLYVDDLLAAVRKEFSQIYDPKRTSYDDFGDIF 111
>tr|Q6Z246|Q6Z246_ORYSJ Os08g0480100 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0092C08.1-1 PE=2 SV=1 Length = 624
Score = 136 bits (342), Expect = 1e-30 Identities = 72/116 (62%), Positives = 91/116 (78%), Gaps = 3/116 (2%) Frame = +3
Query: 9 MLEQLLIFTRGGLILWTYKELAN--ALRGSPIDALITSCLLEDRSALTSFQYDAAGCSYT 182 MLE+LLIFTRGGLILW+ AL+GSPIDALI SCLLE+RSA SF D +Y Sbjct: 1 MLEELLIFTRGGLILWSSCRALGGAALKGSPIDALIRSCLLEERSADASFSQD----TYA 56
Query: 183 LKWSFHNDLGLVFVAVYRKILHLLYVDDLLDEVKQEFSPLYNAEKTNYPN-FNDTF 347 LKW+F+NDLGLVFVAVY+++LHLLYVDDLL V++EFS +Y+ ++T+Y + FN+ F Sbjct: 57 LKWTFNNDLGLVFVAVYQRMLHLLYVDDLLAAVRKEFSQIYDPKRTSYDDAFNEVF 112
>tr|A2YWB0|A2YWB0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_29622 PE=4 SV=1 Length = 624
Score = 136 bits (342), Expect = 1e-30 Identities = 72/116 (62%), Positives = 91/116 (78%), Gaps = 3/116 (2%) Frame = +3
Query: 9 MLEQLLIFTRGGLILWTYKELAN--ALRGSPIDALITSCLLEDRSALTSFQYDAAGCSYT 182 MLE+LLIFTRGGLILW+ AL+GSPIDALI SCLLE+RSA SF D +Y Sbjct: 1 MLEELLIFTRGGLILWSSCRALGGAALKGSPIDALIRSCLLEERSADASFSQD----TYA 56
Query: 183 LKWSFHNDLGLVFVAVYRKILHLLYVDDLLDEVKQEFSPLYNAEKTNYPN-FNDTF 347 LKW+F+NDLGLVFVAVY+++LHLLYVDDLL V++EFS +Y+ ++T+Y + FN+ F Sbjct: 57 LKWTFNNDLGLVFVAVYQRMLHLLYVDDLLAAVRKEFSQIYDPKRTSYDDAFNEVF 112
>tr|A3BU59|A3BU59_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_026581 PE=4 SV=1 Length = 1129
Score = 134 bits (338), Expect = 3e-30 Identities = 71/118 (60%), Positives = 91/118 (77%), Gaps = 3/118 (2%) Frame = +3
Query: 3 IAMLEQLLIFTRGGLILWTYKELAN--ALRGSPIDALITSCLLEDRSALTSFQYDAAGCS 176 + MLE+LLIF RGGLILW+ AL+GSPIDALI SCLLE+RSA SF D + Sbjct: 504 VEMLEELLIFKRGGLILWSSCRALGGAALKGSPIDALIRSCLLEERSADASFSQD----T 559
Query: 177 YTLKWSFHNDLGLVFVAVYRKILHLLYVDDLLDEVKQEFSPLYNAEKTNYPN-FNDTF 347 Y LKW+F+NDLGLVFVAVY+++LHLLYVDDLL V++EFS +Y+ ++T+Y + FN+ F Sbjct: 560 YALKWTFNNDLGLVFVAVYQRMLHLLYVDDLLAAVRKEFSQIYDPKRTSYDDAFNEVF 617
>tr|A9SLT4|A9SLT4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_230133 PE=4 SV=1 Length = 591
Score = 128 bits (322), Expect = 2e-28 Identities = 64/113 (56%), Positives = 83/113 (73%) Frame = +3
Query: 9 MLEQLLIFTRGGLILWTYKELANALRGSPIDALITSCLLEDRSALTSFQYDAAGCSYTLK 188 MLEQ LIFTRGGL+LW+ EL AL+GSP R SFQY+AAG YTLK Sbjct: 1 MLEQFLIFTRGGLVLWSCLELGKALKGSP------------RGGDCSFQYNAAGAGYTLK 48
Query: 189 WSFHNDLGLVFVAVYRKILHLLYVDDLLDEVKQEFSPLYNAEKTNYPNFNDTF 347 W F+N+LGLVFVA+Y++ILHLLYVD+LL++V +EFS L+ + +T Y +F+DT+ Sbjct: 49 WRFYNELGLVFVAIYQRILHLLYVDELLEKVMREFSNLFVSARTVYHDFDDTY 101
>tr|Q6Z245|Q6Z245_ORYSJ Putative signal recognition particle receptor OS=Oryza sativa subsp. japonica GN=OSJNBb0092C08.1-2 PE=4 SV=1 Length = 610
Score = 109 bits (273), Expect = 1e-22 Identities = 62/116 (53%), Positives = 80/116 (68%), Gaps = 3/116 (2%) Frame = +3
Query: 9 MLEQLLIFTRGGLILWTYKELAN--ALRGSPIDALITSCLLEDRSALTSFQYDAAGCSYT 182 MLE+LLIFTRGGLILW+ AL+GSPIDA SF D +Y Sbjct: 1 MLEELLIFTRGGLILWSSCRALGGAALKGSPIDA--------------SFSQD----TYA 42
Query: 183 LKWSFHNDLGLVFVAVYRKILHLLYVDDLLDEVKQEFSPLYNAEKTNYPN-FNDTF 347 LKW+F+NDLGLVFVAVY+++LHLLYVDDLL V++EFS +Y+ ++T+Y + FN+ F Sbjct: 43 LKWTFNNDLGLVFVAVYQRMLHLLYVDDLLAAVRKEFSQIYDPKRTSYDDAFNEVF 98
>tr|A8IS72|A8IS72_CHLRE Alpha subunit of the SRP receptor OS=Chlamydomonas reinhardtii GN=SRRA1 PE=4 SV=1 Length = 687
Score = 105 bits (261), Expect = 3e-21 Identities = 58/117 (49%), Positives = 77/117 (65%), Gaps = 4/117 (3%) Frame = +3
Query: 9 MLEQLLIFTRGGLILWTYKELANALRGSP---IDALITSCLLEDRSALTSFQYDA-AGCS 176 ML+ +L F RGG ILW + +LR +P I+ALI CLLE+R +F ++ +G Sbjct: 1 MLDYVLAFERGGAILWALQ--FTSLRHNPLEAINALIRGCLLEERLGDNTFTFNPKSGAP 58
Query: 177 YTLKWSFHNDLGLVFVAVYRKILHLLYVDDLLDEVKQEFSPLYNAEKTNYPNFNDTF 347 TLKW+FHN LGLVFVAVY+K L LLYVD+LL VK+EF +Y + Y F++TF Sbjct: 59 QTLKWTFHNGLGLVFVAVYQKTLSLLYVDELLSNVKEEFVNVYKPGQRGYRQFDETF 115
|