DK958157 |
Clone id |
TST39A01NGRL0030_E06 |
Library |
TST39 |
Length |
572 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0030_E06. 5' end sequence. |
Accession |
DK958157 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GGCATTTGCAATCGATAGAGCGGAGCCACTGATTTGCTTTGCGCTTTGCTGTGGGGGACG CTCAGATCCAGCAGTGAGAGTGTACACCTCGAAGCATGTGCACGGGGAGCTCGAGACAGC AATGAAAGAGTATCTCCAGGCAAGCATAGGATTCCAAAACAGCAAAAGAATCCTTCTTCC CAAGGTTCTAGAGTGGTACATGAAGGAGGCATCACTCTCTTCTAATTACCTTCTTGACTG GATTGCCCAGTATGTGAATGAGCAAGACAGAGAGAGCATTAGAAGGTGTATTCACTCTAG ACCACATAAGAGTGCAACCCATTGCATTGAGTGGGTTCCATACAACTTCGGATTTCGATA CATCTTGCATCGCAATCTTGCGTCAGGAACCCCATCTTGCATTCAATGAGGACATCATCG TGCAAGCTTCCATGGTACCATTCTCCTCATCTTGCATTCAGTGAAGACAAAATCATGCAA GCTGTGATTGTACCACTCTCCTACATGCAAAAAGATTGGCTTGTTTGAGGAGTAAGAGCT CCCATTTCACTTGTTAATATTCTCCCTCTTTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q10075 |
Definition |
sp|Q10075|PCS_SCHPO Glutathione gamma-glutamylcysteinyltransferase OS=Schizosaccharomyces pombe |
Align length |
78 |
Score (bit) |
34.7 |
E-value |
0.35 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U1U9 |
Definition |
tr|A9U1U9|A9U1U9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
135 |
Score (bit) |
153.0 |
E-value |
6.0e-36 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958157|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0030_E06, 5' (572 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9U1U9|A9U1U9_PHYPA Predicted protein (Fragment) OS=Physcomit... 153 6e-36 tr|B8LS42|B8LS42_PICSI Putative uncharacterized protein OS=Picea... 149 1e-34 tr|A7R8T0|A7R8T0_VITVI Chromosome undetermined scaffold_2903, wh... 129 1e-28 tr|A7QK83|A7QK83_VITVI Chromosome chr19 scaffold_111, whole geno... 129 1e-28 tr|A5BI84|A5BI84_VITVI Putative uncharacterized protein OS=Vitis... 129 1e-28 tr|Q75KA1|Q75KA1_ORYSJ Putative uncharacterized protein OSJNBb01... 122 2e-26 tr|Q10EI6|Q10EI6_ORYSJ Ternary complex factor MIP1, putative, ex... 122 2e-26 tr|Q0DN81|Q0DN81_ORYSJ Os03g0769000 protein OS=Oryza sativa subs... 122 2e-26 tr|B8BPI4|B8BPI4_ORYSI Putative uncharacterized protein OS=Oryza... 122 2e-26 tr|Q9LVS1|Q9LVS1_ARATH Arabidopsis thaliana genomic DNA, chromos... 121 3e-26 tr|Q0WNM7|Q0WNM7_ARATH Putative uncharacterized protein At5g4738... 121 3e-26 tr|A7R5I2|A7R5I2_VITVI Chromosome undetermined scaffold_976, who... 119 9e-26 tr|Q8RY64|Q8RY64_ARATH AT4g37080/C7A10_280 OS=Arabidopsis thalia... 116 1e-24 tr|Q3E9P4|Q3E9P4_ARATH Uncharacterized protein At4g37080.2 OS=Ar... 116 1e-24 tr|O23178|O23178_ARATH Putative uncharacterized protein C7A10.28... 116 1e-24 tr|B8B6U7|B8B6U7_ORYSI Putative uncharacterized protein OS=Oryza... 116 1e-24 tr|B4FY34|B4FY34_MAIZE Putative uncharacterized protein OS=Zea m... 115 1e-24 tr|Q2A9X3|Q2A9X3_BRAOL Putative uncharacterized protein OS=Brass... 114 5e-24 tr|A4Q964|A4Q964_POPTN Putative uncharacterized protein OS=Popul... 114 5e-24 tr|A4Q962|A4Q962_POPTN Putative uncharacterized protein OS=Popul... 114 5e-24 tr|A4Q954|A4Q954_POPTN Putative uncharacterized protein OS=Popul... 114 5e-24 tr|A4Q944|A4Q944_POPTN Putative uncharacterized protein OS=Popul... 114 5e-24 tr|A4Q942|A4Q942_POPTN Putative uncharacterized protein OS=Popul... 114 5e-24 tr|A7R4G3|A7R4G3_VITVI Chromosome undetermined scaffold_682, who... 113 9e-24 tr|A5BJA4|A5BJA4_VITVI Putative uncharacterized protein OS=Vitis... 113 9e-24 tr|A4Q959|A4Q959_POPTN Putative uncharacterized protein OS=Popul... 112 1e-23 tr|A4Q958|A4Q958_POPTN Putative uncharacterized protein OS=Popul... 112 1e-23 tr|A4Q953|A4Q953_POPTN Putative uncharacterized protein OS=Popul... 112 1e-23 tr|A4Q952|A4Q952_POPTN Putative uncharacterized protein OS=Popul... 112 1e-23 tr|A4Q951|A4Q951_POPTN Putative uncharacterized protein OS=Popul... 112 1e-23
>tr|A9U1U9|A9U1U9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_154462 PE=4 SV=1 Length = 456
Score = 153 bits (387), Expect = 6e-36 Identities = 66/135 (48%), Positives = 97/135 (71%) Frame = +2
Query: 2 AFAIDRAEPLICFALCCGGRSDPAVRVYTSKHVHGELETAMKEYLQASIGFQNSKRILLP 181 A+ + EPL+CFALCCGGRSDPA+RVYT+K+V +LE+A E+LQA++ + ++LLP Sbjct: 322 AYGLHAPEPLVCFALCCGGRSDPAIRVYTAKNVKSQLESAKLEFLQANVVIRGESKVLLP 381
Query: 182 KVLEWYMKEASLSSNYLLDWIAQYVNEQDRESIRRCIHSRPHKSATHCIEWVPYNFGFRY 361 ++LEWY +E L+ + LL + Q V + + IR+CI ++PHKS HC++W+PY+FGFRY Sbjct: 382 RILEWYARELGLNPSTLLQLVYQSVPLEMQARIRQCIQAKPHKSPAHCLQWIPYHFGFRY 441
Query: 362 ILHRNLASGTPSCIQ 406 + R LA P+ Q Sbjct: 442 LFVRELALQFPASAQ 456
>tr|B8LS42|B8LS42_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 648
Score = 149 bits (376), Expect = 1e-34 Identities = 70/128 (54%), Positives = 93/128 (72%) Frame = +2
Query: 5 FAIDRAEPLICFALCCGGRSDPAVRVYTSKHVHGELETAMKEYLQASIGFQNSKRILLPK 184 + +D EPL+ FALC G SDPAVR+YT+K+VH ELETA KE+LQASIG QN K++ LP+ Sbjct: 519 YGLDDPEPLVFFALCGGAHSDPAVRIYTAKNVHDELETAKKEFLQASIGIQNHKKVFLPR 578
Query: 185 VLEWYMKEASLSSNYLLDWIAQYVNEQDRESIRRCIHSRPHKSATHCIEWVPYNFGFRYI 364 +LE Y KEAS+S LL W+++ V++Q + +I + I P K + CIEW+PYN FRYI Sbjct: 579 ILERYAKEASISLVNLLHWVSENVDKQLQNAIIKSIERNPQKKSAQCIEWLPYNGSFRYI 638
Query: 365 LHRNLASG 388 R+LA G Sbjct: 639 FTRDLAPG 646
>tr|A7R8T0|A7R8T0_VITVI Chromosome undetermined scaffold_2903, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00012082001 PE=4 SV=1 Length = 225
Score = 129 bits (324), Expect = 1e-28 Identities = 57/125 (45%), Positives = 91/125 (72%) Frame = +2
Query: 5 FAIDRAEPLICFALCCGGRSDPAVRVYTSKHVHGELETAMKEYLQASIGFQNSKRILLPK 184 F + ++PL+CFALC G SDP ++VYT+ ++ ELE A +E+LQA++ + S+++ LPK Sbjct: 94 FGLPSSQPLVCFALCTGAFSDPVLKVYTASNIKEELEVAKREFLQANVIVKKSRKVFLPK 153
Query: 185 VLEWYMKEASLSSNYLLDWIAQYVNEQDRESIRRCIHSRPHKSATHCIEWVPYNFGFRYI 364 VLE + KEAS+SS+ LL W+ + V+++ +SI++CI + +K A+ IEW+PYN FRY+ Sbjct: 154 VLERFAKEASISSDDLLKWVTENVDKKLHDSIQKCIDHKTNKKASQFIEWLPYNSRFRYV 213
Query: 365 LHRNL 379 R+L Sbjct: 214 FTRDL 218
>tr|A7QK83|A7QK83_VITVI Chromosome chr19 scaffold_111, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001016001 PE=4 SV=1 Length = 475
Score = 129 bits (324), Expect = 1e-28 Identities = 56/125 (44%), Positives = 92/125 (73%) Frame = +2
Query: 5 FAIDRAEPLICFALCCGGRSDPAVRVYTSKHVHGELETAMKEYLQASIGFQNSKRILLPK 184 F++ ++PL+CFALC G SDP ++VYT+ ++ ELE A +E+LQA++ + ++++ LPK Sbjct: 344 FSLPSSQPLVCFALCTGAFSDPVLKVYTTSNIKEELEVAKREFLQANVVVKKTRKVFLPK 403
Query: 185 VLEWYMKEASLSSNYLLDWIAQYVNEQDRESIRRCIHSRPHKSATHCIEWVPYNFGFRYI 364 VLE + KEAS+SS+ LL W+ + V+++ +SI++CI + +K A+ IEW+PYN FRY+ Sbjct: 404 VLERFTKEASISSDDLLKWVTENVDKKLHDSIQKCIDHKTNKKASQIIEWLPYNSRFRYV 463
Query: 365 LHRNL 379 R+L Sbjct: 464 FTRDL 468
>tr|A5BI84|A5BI84_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014022 PE=4 SV=1 Length = 606
Score = 129 bits (324), Expect = 1e-28 Identities = 57/125 (45%), Positives = 91/125 (72%) Frame = +2
Query: 5 FAIDRAEPLICFALCCGGRSDPAVRVYTSKHVHGELETAMKEYLQASIGFQNSKRILLPK 184 F + ++PL+CFALC G SDP ++VYT+ ++ ELE A +E+LQA++ + S+++ LPK Sbjct: 475 FGLPSSQPLVCFALCTGAFSDPVLKVYTASNIKEELEVAKREFLQANVIVKKSRKVFLPK 534
Query: 185 VLEWYMKEASLSSNYLLDWIAQYVNEQDRESIRRCIHSRPHKSATHCIEWVPYNFGFRYI 364 VLE + KEAS+SS+ LL W+ + V+++ +SI++CI + +K A+ IEW+PYN FRY+ Sbjct: 535 VLERFAKEASISSDDLLKWVTENVDKKLHDSIQKCIDHKTNKKASQFIEWLPYNSRFRYV 594
Query: 365 LHRNL 379 R+L Sbjct: 595 FTRDL 599
>tr|Q75KA1|Q75KA1_ORYSJ Putative uncharacterized protein OSJNBb0106M04.15 (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=OSJNBb0106M04.15 PE=4 SV=1 Length = 644
Score = 122 bits (305), Expect = 2e-26 Identities = 60/127 (47%), Positives = 88/127 (69%) Frame = +2
Query: 2 AFAIDRAEPLICFALCCGGRSDPAVRVYTSKHVHGELETAMKEYLQASIGFQNSKRILLP 181 AFA+ ++EPL+ FALC G SDPAVRVYT K + +LE A +E+++A++G ++ILLP Sbjct: 517 AFAVAQSEPLLRFALCSGSHSDPAVRVYTPKRLFHQLEAAKEEFIRATVGIWKEQKILLP 576
Query: 182 KVLEWYMKEASLSSNYLLDWIAQYVNEQDRESIRRCIHSRPHKSATHCIEWVPYNFGFRY 361 K++E Y K+ LSS L+D + +Y+ E R ++++C SR K IEWVP+N FRY Sbjct: 577 KLVEAYAKDVKLSSQGLVDMVQRYLPESLRMAMQKCQQSRSSK----IIEWVPHNLNFRY 632
Query: 362 ILHRNLA 382 +L R+LA Sbjct: 633 LLSRDLA 639
>tr|Q10EI6|Q10EI6_ORYSJ Ternary complex factor MIP1, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g55890 PE=4 SV=1 Length = 649
Score = 122 bits (305), Expect = 2e-26 Identities = 60/127 (47%), Positives = 88/127 (69%) Frame = +2
Query: 2 AFAIDRAEPLICFALCCGGRSDPAVRVYTSKHVHGELETAMKEYLQASIGFQNSKRILLP 181 AFA+ ++EPL+ FALC G SDPAVRVYT K + +LE A +E+++A++G ++ILLP Sbjct: 522 AFAVAQSEPLLRFALCSGSHSDPAVRVYTPKRLFHQLEAAKEEFIRATVGIWKEQKILLP 581
Query: 182 KVLEWYMKEASLSSNYLLDWIAQYVNEQDRESIRRCIHSRPHKSATHCIEWVPYNFGFRY 361 K++E Y K+ LSS L+D + +Y+ E R ++++C SR K IEWVP+N FRY Sbjct: 582 KLVEAYAKDVKLSSQGLVDMVQRYLPESLRMAMQKCQQSRSSK----IIEWVPHNLNFRY 637
Query: 362 ILHRNLA 382 +L R+LA Sbjct: 638 LLSRDLA 644
>tr|Q0DN81|Q0DN81_ORYSJ Os03g0769000 protein OS=Oryza sativa subsp. japonica GN=Os03g0769000 PE=4 SV=1 Length = 667
Score = 122 bits (305), Expect = 2e-26 Identities = 60/127 (47%), Positives = 88/127 (69%) Frame = +2
Query: 2 AFAIDRAEPLICFALCCGGRSDPAVRVYTSKHVHGELETAMKEYLQASIGFQNSKRILLP 181 AFA+ ++EPL+ FALC G SDPAVRVYT K + +LE A +E+++A++G ++ILLP Sbjct: 540 AFAVAQSEPLLRFALCSGSHSDPAVRVYTPKRLFHQLEAAKEEFIRATVGIWKEQKILLP 599
Query: 182 KVLEWYMKEASLSSNYLLDWIAQYVNEQDRESIRRCIHSRPHKSATHCIEWVPYNFGFRY 361 K++E Y K+ LSS L+D + +Y+ E R ++++C SR K IEWVP+N FRY Sbjct: 600 KLVEAYAKDVKLSSQGLVDMVQRYLPESLRMAMQKCQQSRSSK----IIEWVPHNLNFRY 655
Query: 362 ILHRNLA 382 +L R+LA Sbjct: 656 LLSRDLA 662
>tr|B8BPI4|B8BPI4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38239 PE=4 SV=1 Length = 649
Score = 122 bits (305), Expect = 2e-26 Identities = 60/127 (47%), Positives = 88/127 (69%) Frame = +2
Query: 2 AFAIDRAEPLICFALCCGGRSDPAVRVYTSKHVHGELETAMKEYLQASIGFQNSKRILLP 181 AFA+ ++EPL+ FALC G SDPAVRVYT K + +LE A +E+++A++G ++ILLP Sbjct: 522 AFAVAQSEPLLRFALCSGSHSDPAVRVYTPKRLFHQLEAAKEEFIRATVGIWKEQKILLP 581
Query: 182 KVLEWYMKEASLSSNYLLDWIAQYVNEQDRESIRRCIHSRPHKSATHCIEWVPYNFGFRY 361 K++E Y K+ LSS L+D + +Y+ E R ++++C SR K IEWVP+N FRY Sbjct: 582 KLVEAYAKDVKLSSQGLVDMVQRYLPESLRMAMQKCQQSRSSK----IIEWVPHNLNFRY 637
Query: 362 ILHRNLA 382 +L R+LA Sbjct: 638 LLSRDLA 644
>tr|Q9LVS1|Q9LVS1_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQL5 OS=Arabidopsis thaliana PE=4 SV=1 Length = 598
Score = 121 bits (303), Expect = 3e-26 Identities = 53/131 (40%), Positives = 90/131 (68%), Gaps = 1/131 (0%) Frame = +2
Query: 5 FAIDRAEPLICFALCCGGRSDPAVRVYTSKHVHGELETAMKEYLQASIGFQNSKRILLPK 184 F++D+ EPL+CFALC G SDP ++ YT+ +V EL+ + +E+L A++ + K++LLPK Sbjct: 445 FSLDKPEPLVCFALCIGALSDPVLKAYTASNVKEELDASKREFLGANVVVKMQKKVLLPK 504
Query: 185 VLEWYMKEASLSSNYLLDWIAQYVNEQDRESIRRCIHSRP-HKSATHCIEWVPYNFGFRY 361 ++E + KEASLS + L+ W+ +E+ ESI++C+ +P +K A+ +EW+PY+ FRY Sbjct: 505 IIERFTKEASLSFDDLMRWLIDNADEKLGESIQKCVQGKPNNKKASQVVEWLPYSSKFRY 564
Query: 362 ILHRNLASGTP 394 + ++L P Sbjct: 565 VFSKDLMEKKP 575
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