DK958129
Clone id TST39A01NGRL0030_D02
Library
Length 627
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0030_D02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CAAAAAGAAGGAAAAGGTCGTCTCCCTTTCTCTTTCGTGCTCATCGTCGATCTCCATCGC
CAGCTGCAGGCAAAGATCAGGAGTCACCTGTCTCCCTGCTAGAATCGAGAGGTAGCAGCA
GCTGATGTAAGAAGAAGAACAAGAGTGTGTCGTGGAAATCTGAATTGCAGAGGAGTCATT
CTGTCAAAAACGCCGTGCAGAAGTAGAATGGCTATGGTTTTTATCCCAGCTCCGATCCCA
TTGGCTCTTCCGCCTCCACCACGTGCTTGCAAATCAATTGGGTCCTCGCGCTGCTGATAC
ATGCAGCCTCTTGTACATTTATAAAAACCCTTTCTCTTGTTCTTCAGCACCGATTTTAGA
ATTGTTTTTATATTCTTGGAGCGGTTTCTCTTCAATTAAGACAATTTGCTCCAATCTCTG
TTTCTTTGGTTTGGTGTTTTCTGCCTTGTCCTGGGCGAAATCAATTTTCTTCCGTGCTCC
ATACATTTCGGCCCAACAAAATTTAAAGCAGGGATTTTAGGTTGTCTTTCTGCTCTGCAC
GATCATGCCACTTGGCCTTTTGCGTTTACATCAACATGGAAGAAGATGATGGAACACTCA
GCAATCCAGCTGCATCTGAGCTTAAAC
■■Homology search results ■■ -
sp_hit_id Q7ZVS9
Definition sp|Q7ZVS9|MYCB_DANRE Transcriptional regulator Myc-B OS=Danio rerio
Align length 110
Score (bit) 33.9
E-value 0.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK958129|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0030_D02, 5'
(627 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7ZVS9|MYCB_DANRE Transcriptional regulator Myc-B OS=Danio re... 34 0.70
sp|P03832|INBN_SHIDY Insertion element iso-IS1n protein insB OS=... 33 1.2
sp|Q8K298|ANLN_MOUSE Actin-binding protein anillin OS=Mus muscul... 32 2.0
sp|P54938|NFM_RABIT Neurofilament medium polypeptide (Fragment) ... 32 2.1
sp|O07051|LTAA_AERJA L-allo-threonine aldolase OS=Aeromonas jand... 30 7.8

>sp|Q7ZVS9|MYCB_DANRE Transcriptional regulator Myc-B OS=Danio rerio
GN=mycb PE=2 SV=1
Length = 396

Score = 33.9 bits (76), Expect = 0.70
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 11/110 (10%)
Frame = -2

Query: 578 HVDVNAKGQVA*SCRAERQPKIPALNFVGP----KCMEHGRKLISPRTRQKTPNQRNRDW 411
HV+++ A QP + + F K + H RK SPRT N + R
Sbjct: 259 HVNIHQHNYAAHPSTRNEQPAVKRIKFESHIRVFKQISHNRKCASPRTSDSEDNDKRRTH 318

Query: 410 SKLS*LKRNRSK----NIKTILKSVLKNKRKG---FYKCTRGCMYQQRED 282
+ L +RN K ++ ++ V N++ K C+ +ED
Sbjct: 319 NVLERQRRNELKLSFFALRDVIPDVANNEKAAKVVILKKATECIASMQED 368


>sp|P03832|INBN_SHIDY Insertion element iso-IS1n protein insB
OS=Shigella dysenteriae GN=insB PE=3 SV=1
Length = 131

Score = 33.1 bits (74), Expect = 1.2
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +2

Query: 206 EWLWFLSQLRSHWLFRLHH-----VLANQLGPRAADTCSLLYIYKNPFS 337
+W + S+ R HWL+ ++ VLA GPR +TC L PF+
Sbjct: 10 QWSFVGSKARQHWLWYAYNTKTGGVLAYTFGPRTDETCRELLALLTPFN 58


>sp|Q8K298|ANLN_MOUSE Actin-binding protein anillin OS=Mus musculus
GN=Anln PE=1 SV=2
Length = 1121

Score = 32.3 bits (72), Expect = 2.0
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = -2

Query: 512 PALNFVGPKCMEHGRKLISPRTRQKTPNQRNRDWSKLS*LKRNRSKNIKTILKSVLKNKR 333
P L G +C EH ++ S R KTPN + L + + + T L LK +R
Sbjct: 367 PFLERFGERCQEHSKESPSYRASHKTPNITPNTKAIQERLFKQNTCSSTTHLAQQLKQER 426

Query: 332 KGFYKCTRG 306
+ C RG
Sbjct: 427 EKELACLRG 435


>sp|P54938|NFM_RABIT Neurofilament medium polypeptide (Fragment)
OS=Oryctolagus cuniculus GN=NEFM PE=2 SV=1
Length = 644

Score = 32.3 bits (72), Expect = 2.1
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -1

Query: 468 KIDFAQDKAENTKPKKQRLEQIVLIEEKPLQEYKNNSKIGAE--EQEKG 328
K + A++ A TKP K LE+ EKPLQ+ K K G E +E+G
Sbjct: 468 KEEAAEEAATITKPTKVGLEKETKEGEKPLQQEKEKEKAGEEGGSEEEG 516


>sp|O07051|LTAA_AERJA L-allo-threonine aldolase OS=Aeromonas jandaei
GN=ltaA PE=1 SV=1
Length = 338

Score = 30.4 bits (67), Expect = 7.8
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +1

Query: 472 PCSIHFGPTKFKAGILGCLSALHDHATWPFAFTSTWKKMMEHSAIQLHL 618
P +HF PT+ L CL H+ P + +++++ +QLHL
Sbjct: 124 PDDVHFTPTR-----LVCLENTHNGKVLPLPYLREMRELVDEHGLQLHL 167


tr_hit_id B3KZ46
Definition tr|B3KZ46|B3KZ46_PLAKH Putative uncharacterized protein OS=Plasmodium knowlesi (strain H)
Align length 59
Score (bit) 36.2
E-value 1.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK958129|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0030_D02, 5'
(627 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3KZ46|B3KZ46_PLAKH Putative uncharacterized protein OS=Plasm... 36 1.6
tr|B0DS37|B0DS37_LACBS Predicted protein OS=Laccaria bicolor (st... 35 3.7
tr|Q32F80|Q32F80_SHIDS Iso-IS1 ORF2 OS=Shigella dysenteriae sero... 34 6.2
tr|Q32F34|Q32F34_SHIDS Iso-IS1 ORF2 OS=Shigella dysenteriae sero... 34 6.2
tr|B0UY64|B0UY64_DANRE Myelocytomatosis oncogene b OS=Danio reri... 34 8.1

>tr|B3KZ46|B3KZ46_PLAKH Putative uncharacterized protein OS=Plasmodium
knowlesi (strain H) GN=PKH_010820 PE=4 SV=1
Length = 3033

Score = 36.2 bits (82), Expect = 1.6
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = -2

Query: 452 RTRQKTPNQRNRDWSKLS*LKRNRSKNIKTILKSVLKNKRKGFYKCTRGCMYQQREDPI 276
R RQK + + W +S KR + K I KSVL K+K ++ C ++++R+ +
Sbjct: 939 RNRQKKMKKIIQGWVSISREKREKKKKILLFFKSVLMRKKKKYFDCLLRHVHRRRKKKV 997


>tr|B0DS37|B0DS37_LACBS Predicted protein OS=Laccaria bicolor
(strain S238N-H82) GN=LACBIDRAFT_332251 PE=4 SV=1
Length = 675

Score = 35.0 bits (79), Expect = 3.7
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = -1

Query: 411 EQIVLIEEKPLQEYKNNSKIGAEEQEKGFL*MYKRLHVSAARGPN*FASTWWRRKSQWDR 232
E EEK L+EY ++ ++E+ K L M+K + A GP WR + + +
Sbjct: 21 EHFSATEEKVLREYLDDFTTKSKEERKDLL-MFKIYRLIKAAGPE-LTPDQWRIRKKKVK 78

Query: 231 SWDKNHSHSTSARRF 187
W NH RR+
Sbjct: 79 EWYYNHGRRPHVRRY 93


>tr|Q32F80|Q32F80_SHIDS Iso-IS1 ORF2 OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=SDY_1919 PE=4 SV=1
Length = 131

Score = 34.3 bits (77), Expect = 6.2
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +2

Query: 206 EWLWFLSQLRSHWLFRLHH-----VLANQLGPRAADTCSLLYIYKNPFSCS 343
+W + S+ R HWL+ ++ VLA GPR +TC L PF+ S
Sbjct: 10 QWSFVGSKARQHWLWYAYNTKTGGVLAYTFGPRTDETCRELLALLTPFNIS 60


>tr|Q32F34|Q32F34_SHIDS Iso-IS1 ORF2 OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=SDY_1971 PE=4 SV=1
Length = 131

Score = 34.3 bits (77), Expect = 6.2
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +2

Query: 206 EWLWFLSQLRSHWLFRLHH-----VLANQLGPRAADTCSLLYIYKNPFSCS 343
+W + S+ R HWL+ ++ VLA GPR +TC L PF+ S
Sbjct: 10 QWSFVGSKARQHWLWYAYNTKTGGVLAYTFGPRTDETCRELLALLTPFNIS 60


>tr|B0UY64|B0UY64_DANRE Myelocytomatosis oncogene b OS=Danio rerio
GN=mycb PE=4 SV=1
Length = 396

Score = 33.9 bits (76), Expect = 8.1
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 11/110 (10%)
Frame = -2

Query: 578 HVDVNAKGQVA*SCRAERQPKIPALNFVGP----KCMEHGRKLISPRTRQKTPNQRNRDW 411
HV+++ A QP + + F K + H RK SPRT N + R
Sbjct: 259 HVNIHQHNYAAHPSTRNEQPAVKRIKFESHIRVFKQISHNRKCASPRTSDSEDNDKRRTH 318

Query: 410 SKLS*LKRNRSK----NIKTILKSVLKNKRKG---FYKCTRGCMYQQRED 282
+ L +RN K ++ ++ V N++ K C+ +ED
Sbjct: 319 NVLERQRRNELKLSFFALRDVIPDVANNEKAAKVVILKKATECIASMQED 368