DK958094
Clone id TST39A01NGRL0030_B15
Library
Length 650
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0030_B15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
CAAAGCGAGAGACGAAGTTTCTCCTGTACATTTTGGAACAAGCTATGAGGAATGAGTCTC
TTTGCGATGAGGCTTCTTTAACAGTGGCAGAACAAAGGAGGAGATGAACTCGCTAGTTCT
TGATCTGGGTCATCTCCCCAGTACTGGCCTTGTGCAGGGCCGCAAGCAGACCAAGGTCTC
GGCTAAAGACAGGGAGCGCTCTTGCCTTCGCTTGCAGCGGTTGATTATCGGTCGCCGCAT
TGGAACCTTTCTTGCCTTCTTCATCTCTGCTATCTCCCTGCTAATGCTCTTCAACATTAC
CAGCAGGGTCACTGCTCCAAAGTCAGCCTCAGACTATGACACTCCACCAGACATGATTTT
TAACAATCAACATCAGAACTTAAGCATGAAGGATATTCAATTTTCTGTGTCTAGTAGCCT
GCACCCAGAACATGAGACAATGGGGGTGCGTCCTACCTCCTTATCAAGTATTCCTCCACC
GAGGGAGAGTTTGCCAAAGTTTCAAAAGGCAGGCACTCCCATGCAAAGGATAGACAGCTA
TCAGCATGGGCCTTGGCCTTGGTTTAGTTCAGATCATCCCTTACCTCTGGGTCATCCTTG
TCAAGGTTTCGCTCTGCCTTCTCCCCCAGCTGACAAAAAGCGAACTGGTC
■■Homology search results ■■ -
sp_hit_id Q9JKS6
Definition sp|Q9JKS6|PCLO_RAT Protein piccolo OS=Rattus norvegicus
Align length 89
Score (bit) 36.6
E-value 0.12
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK958094|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0030_B15, 5'
(650 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9JKS6|PCLO_RAT Protein piccolo OS=Rattus norvegicus GN=Pclo ... 37 0.12
sp|Q9QYX7|PCLO_MOUSE Protein piccolo OS=Mus musculus GN=Pclo PE=... 35 0.26
sp|Q9Y6V0|PCLO_HUMAN Protein piccolo OS=Homo sapiens GN=PCLO PE=... 35 0.26
sp|Q9VCA8|ANKHM_DROME Ankyrin repeat and KH domain-containing pr... 35 0.34
sp|Q9PU36|PCLO_CHICK Protein piccolo (Fragment) OS=Gallus gallus... 33 1.3
sp|Q8PL03|LFTR_XANAC Leucyl/phenylalanyl-tRNA--protein transfera... 32 2.9
sp|P10070|GLI2_HUMAN Zinc finger protein GLI2 OS=Homo sapiens GN... 32 2.9
sp|Q6NSM8|QSK_DANRE Serine/threonine-protein kinase QSK homolog ... 32 3.8
sp|O43516|WIPF1_HUMAN WAS/WASL-interacting protein family member... 31 6.4
sp|O60522|TDRD6_HUMAN Tudor domain-containing protein 6 OS=Homo ... 31 6.4
sp|Q4P149|XRN2_USTMA 5'-3' exoribonuclease 2 OS=Ustilago maydis ... 30 8.4
sp|Q13470|TNK1_HUMAN Non-receptor tyrosine-protein kinase TNK1 O... 30 8.4
sp|Q06219|NR4A2_MOUSE Nuclear receptor subfamily 4 group A membe... 30 8.4
sp|Q3SH93|LFTR_THIDA Leucyl/phenylalanyl-tRNA--protein transfera... 30 8.4
sp|Q9HA82|LASS4_HUMAN LAG1 longevity assurance homolog 4 OS=Homo... 30 8.4

>sp|Q9JKS6|PCLO_RAT Protein piccolo OS=Rattus norvegicus GN=Pclo PE=1
SV=1
Length = 5085

Score = 36.6 bits (83), Expect = 0.12
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Frame = +2

Query: 314 APKSASDYDTPPDMIFNNQHQNLSMKDIQFSV--------SSSLHPEHETMGVRPTSLSS 469
A K +S+ +++ ++ L M+ + S SSSLH T G PTS+SS
Sbjct: 1624 ADKYSSESSQKKTILYFDEEPELEMESLTDSPEDRSRGEGSSSLHASSFTPGTSPTSVSS 1683

Query: 470 IPPPRESLPKFQKAGTPMQRIDSYQ-HGP 553
+ +S P +K + QR ++ HGP
Sbjct: 1684 LDEDSDSSPSHKKGESKQQRKARHRSHGP 1712


>sp|Q9QYX7|PCLO_MOUSE Protein piccolo OS=Mus musculus GN=Pclo PE=1
SV=3
Length = 5038

Score = 35.4 bits (80), Expect = 0.26
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2

Query: 410 SSSLHPEHETMGVRPTSLSSIPPPRESLPKFQKAGTPMQRIDSYQ-HGP 553
SSSLH T G PTS+SS+ +S P +K + QR ++ HGP
Sbjct: 1622 SSSLHASSFTPGTSPTSVSSLDEDSDSSPSHKKGESKQQRKARHRSHGP 1670


>sp|Q9Y6V0|PCLO_HUMAN Protein piccolo OS=Homo sapiens GN=PCLO PE=1
SV=3
Length = 5183

Score = 35.4 bits (80), Expect = 0.26
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2

Query: 410 SSSLHPEHETMGVRPTSLSSIPPPRESLPKFQKAGTPMQRIDSYQ-HGP 553
SSSLH T G PTS+SS+ +S P +K + QR ++ HGP
Sbjct: 1648 SSSLHASSFTPGTSPTSVSSLDEDSDSSPSHKKGESKQQRKARHRPHGP 1696


>sp|Q9VCA8|ANKHM_DROME Ankyrin repeat and KH domain-containing protein
mask OS=Drosophila melanogaster GN=mask PE=1 SV=2
Length = 4001

Score = 35.0 bits (79), Expect = 0.34
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Frame = +2

Query: 359 FNNQHQNLSMKDIQFSVSSSLHPEHETMGVRPTSLSSIPPPRESLPKFQ------KAGTP 520
FN +L+M+D +++S L P + +P L PPP +S + Q K
Sbjct: 3851 FNVGGPSLNMED---ALASVLPPWAHELKAQPPGLQQPPPPPQSQQQQQQPLNWLKQQPQ 3907

Query: 521 MQRIDSYQHGPWPWFSSDHPLPLGHPCQGFALPSPP 628
Q+ +Y +GP+P H P+ P + +PP
Sbjct: 3908 QQQYRAYNNGPYPQQQQQHE-PMNMPMDYHNMQAPP 3942


>sp|Q9PU36|PCLO_CHICK Protein piccolo (Fragment) OS=Gallus gallus
GN=PCLO PE=2 SV=1
Length = 5120

Score = 33.1 bits (74), Expect = 1.3
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +2

Query: 410 SSSLHPEHETMGVRPTSLSSIPPPRESLPKFQKAG--TPMQRIDSYQ-HGP 553
SSSLH T G PTS+SS+ +S P +K G + QR ++ HGP
Sbjct: 1633 SSSLHASSFTPGTSPTSVSSLDEDSDSSPSHKKLGGESKQQRKARHRSHGP 1683


>sp|Q8PL03|LFTR_XANAC Leucyl/phenylalanyl-tRNA--protein transferase
OS=Xanthomonas axonopodis pv. citri GN=aat PE=3 SV=1
Length = 249

Score = 32.0 bits (71), Expect = 2.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2

Query: 518 PMQRIDSYQHGPWPWFSSDHPL 583
P + +++Y HG +PWFS D P+
Sbjct: 39 PQRLLNAYAHGIFPWFSQDQPI 60


>sp|P10070|GLI2_HUMAN Zinc finger protein GLI2 OS=Homo sapiens GN=GLI2
PE=1 SV=4
Length = 1586

Score = 32.0 bits (71), Expect = 2.9
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 10/121 (8%)
Frame = +2

Query: 317 PKSASDYDTPPDMIFNNQHQNLSMKDIQFSVSSSLHPEHETMGVRPTSLSSIPPPR--ES 490
P+S S+ P + + Q ++ +++ H +GV ++L+ +PPP +S
Sbjct: 1267 PQSCSNMPAKPGHLGHPQQTEVAPDP------TTMGNRHRELGVPDSALAGVPPPHPVQS 1320

Query: 491 LPKFQKAGTPMQRIDSYQHGP------WPWFSSDHPLPLGHPCQGFAL--PSPPADKKRT 646
P+ + Y P P F P+G GF L P PP + T
Sbjct: 1321 YPQQSHHLAASMSQEGYHQVPSLLPARQPGFMEPQTGPMGVATAGFGLVQPRPPLEPSPT 1380

Query: 647 G 649
G
Sbjct: 1381 G 1381


>sp|Q6NSM8|QSK_DANRE Serine/threonine-protein kinase QSK homolog
OS=Danio rerio GN=zgc:66101 PE=2 SV=1
Length = 1187

Score = 31.6 bits (70), Expect = 3.8
Identities = 31/87 (35%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Frame = +2

Query: 395 IQFSVSSSLHPEHETMGVRPTSLSSIPPPRESLPKFQKAGTPMQRIDSYQHGPWPWFS-S 571
IQ S HP + RP + SS PPP Q G P YQHG + S S
Sbjct: 697 IQPSSPPPTHPSNHLF--RPANQSSPPPPGGGAGLMQTHGGP--SAVQYQHGSALYQSPS 752

Query: 572 DHPLPLGHPCQGFA--LPSPPADKKRT 646
D P P P A PS P RT
Sbjct: 753 DSPPPTSLPRMALANQQPSVPPGSART 779


>sp|O43516|WIPF1_HUMAN WAS/WASL-interacting protein family member 1
OS=Homo sapiens GN=WIPF1 PE=1 SV=2
Length = 503

Score = 30.8 bits (68), Expect = 6.4
Identities = 30/125 (24%), Positives = 40/125 (32%), Gaps = 23/125 (18%)
Frame = +2

Query: 344 PPDMIFNNQHQNLSMKDIQFSVSSSLHPEHETMGVRPTSLSSIPPPRESLPKFQKAGTP- 520
PP N++ L +++ S S+ P G P S PPP P + P
Sbjct: 322 PPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPP 381

Query: 521 ----------------------MQRIDSYQHGPWPWFSSDHPLPLGHPCQGFALPSPPAD 634
+DS + GP P PLP P G P PP+
Sbjct: 382 PPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRP------PLPPDRPSAGAPPPPPPST 435

Query: 635 KKRTG 649
R G
Sbjct: 436 SIRNG 440


>sp|O60522|TDRD6_HUMAN Tudor domain-containing protein 6 OS=Homo
sapiens GN=TDRD6 PE=2 SV=2
Length = 2096

Score = 30.8 bits (68), Expect = 6.4
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = -3

Query: 471 ILDKEVGRTPIVSCSGCRLLDTEN*ISFMLKF*C*LLKIMSGGVS*SEADFGAVTLLVML 292
+L + GR +VSCS R L E ++ + C L + GG S + G + L++
Sbjct: 343 VLHVDYGRKELVSCSSLRYLLPEYFRMPVVTYPCALYGLWDGGRGWSRSQVGDLKTLILG 402

Query: 291 KSISREI 271
K+++ +I
Sbjct: 403 KAVNAKI 409


tr_hit_id A7R5S5
Definition tr|A7R5S5|A7R5S5_VITVI Chromosome undetermined scaffold_1043, whole genome shotgun sequence OS=Vitis vinifera
Align length 68
Score (bit) 47.8
E-value 0.0006
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK958094|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0030_B15, 5'
(650 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7R5S5|A7R5S5_VITVI Chromosome undetermined scaffold_1043, wh... 48 6e-04
tr|A7R4V6|A7R4V6_VITVI Chromosome undetermined scaffold_791, who... 47 0.001
tr|A7R4P9|A7R4P9_VITVI Chromosome undetermined scaffold_754, who... 47 0.001
tr|A5BFE3|A5BFE3_VITVI Putative uncharacterized protein OS=Vitis... 47 0.001
tr|Q9FZ97|Q9FZ97_ARATH F3H9.11 protein OS=Arabidopsis thaliana G... 45 0.005
tr|Q8W4K7|Q8W4K7_ARATH Putative uncharacterized protein At1g2824... 45 0.005
tr|B4FNS1|B4FNS1_MAIZE Putative uncharacterized protein OS=Zea m... 41 0.055
tr|Q4CZJ9|Q4CZJ9_TRYCR Putative uncharacterized protein OS=Trypa... 38 0.47
tr|Q5B396|Q5B396_EMENI Putative uncharacterized protein OS=Emeri... 38 0.61
tr|B6UCQ3|B6UCQ3_MAIZE Putative uncharacterized protein OS=Zea m... 37 1.0
tr|A9TR40|A9TR40_PHYPA Predicted protein OS=Physcomitrella paten... 37 1.0
tr|B0CR40|B0CR40_LACBS Predicted protein OS=Laccaria bicolor (st... 37 1.0
tr|Q4DTC2|Q4DTC2_TRYCR Putative uncharacterized protein OS=Trypa... 37 1.4
tr|Q4DZY0|Q4DZY0_TRYCR Putative uncharacterized protein OS=Trypa... 36 1.8
tr|A9RN87|A9RN87_PHYPA Predicted protein OS=Physcomitrella paten... 36 2.3
tr|Q4DVW5|Q4DVW5_TRYCR Putative uncharacterized protein OS=Trypa... 36 2.3
tr|Q4DNP3|Q4DNP3_TRYCR Putative uncharacterized protein OS=Trypa... 36 2.3
tr|Q4D846|Q4D846_TRYCR Putative uncharacterized protein OS=Trypa... 36 2.3
tr|Q29HK6|Q29HK6_DROPS GA16976 (Fragment) OS=Drosophila pseudoob... 36 2.3
tr|B4GXJ0|B4GXJ0_DROPE GL20288 (Fragment) OS=Drosophila persimil... 36 2.3
tr|B3P769|B3P769_DROER GG11270 OS=Drosophila erecta GN=GG11270 P... 36 2.3
tr|Q1DM08|Q1DM08_COCIM Chitin synthase OS=Coccidioides immitis G... 36 2.3
tr|Q6K4D7|Q6K4D7_ORYSJ Os09g0363900 protein OS=Oryza sativa subs... 35 3.0
tr|A2Z0E3|A2Z0E3_ORYSI Putative uncharacterized protein OS=Oryza... 35 3.0
tr|Q4E064|Q4E064_TRYCR Putative uncharacterized protein OS=Trypa... 35 3.0
tr|Q4E062|Q4E062_TRYCR Putative uncharacterized protein OS=Trypa... 35 3.0
tr|Q4DY73|Q4DY73_TRYCR Putative uncharacterized protein OS=Trypa... 35 3.0
tr|Q4DUZ0|Q4DUZ0_TRYCR Putative uncharacterized protein OS=Trypa... 35 3.0
tr|A6NG74|A6NG74_HUMAN Putative uncharacterized protein PCLO OS=... 35 3.0
tr|A4D1A8|A4D1A8_HUMAN Similar to Piccolo protein (Aczonin) OS=H... 35 3.0

>tr|A7R5S5|A7R5S5_VITVI Chromosome undetermined scaffold_1043, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00005372001 PE=4 SV=1
Length = 270

Score = 47.8 bits (112), Expect = 6e-04
Identities = 29/68 (42%), Positives = 33/68 (48%)
Frame = +2

Query: 446 VRPTSLSSIPPPRESLPKFQKAGTPMQRIDSYQHGPWPWFSSDHPLPLGHPCQGFALPSP 625
VR S++ PPP P P P F + LP GHPC+ FALP P
Sbjct: 7 VRSESVAQPPPPPPPPPP-----------------PAPVFLG-YNLPPGHPCENFALPPP 48

Query: 626 PADKKRTG 649
PADKKRTG
Sbjct: 49 PADKKRTG 56


>tr|A7R4V6|A7R4V6_VITVI Chromosome undetermined scaffold_791, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00004722001 PE=4 SV=1
Length = 356

Score = 47.0 bits (110), Expect = 0.001
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +2

Query: 581 LPLGHPCQGFALPSPPADKKRTG 649
LP GHPC+ FALP PPADKKRTG
Sbjct: 149 LPPGHPCENFALPPPPADKKRTG 171


>tr|A7R4P9|A7R4P9_VITVI Chromosome undetermined scaffold_754, whole
genome shotgun sequence (Fragment) OS=Vitis vinifera
GN=GSVIVT00004615001 PE=4 SV=1
Length = 581

Score = 47.0 bits (110), Expect = 0.001
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +2

Query: 581 LPLGHPCQGFALPSPPADKKRTG 649
LP GHPC+ FALP PPADKKRTG
Sbjct: 132 LPPGHPCENFALPPPPADKKRTG 154


>tr|A5BFE3|A5BFE3_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_008182 PE=4 SV=1
Length = 570

Score = 47.0 bits (110), Expect = 0.001
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +2

Query: 581 LPLGHPCQGFALPSPPADKKRTG 649
LP GHPC+ FALP PPADKKRTG
Sbjct: 164 LPPGHPCENFALPPPPADKKRTG 186


>tr|Q9FZ97|Q9FZ97_ARATH F3H9.11 protein OS=Arabidopsis thaliana
GN=At1g28240 PE=4 SV=1
Length = 581

Score = 44.7 bits (104), Expect = 0.005
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = +2

Query: 551 PWPWFSSDHPLPLGHPCQGFALPSPPADKKRTG 649
P P + LP GHPC F LP PPAD+KRTG
Sbjct: 132 PPPIHFLGYSLPQGHPCNSFTLPPPPADRKRTG 164


>tr|Q8W4K7|Q8W4K7_ARATH Putative uncharacterized protein At1g28240;
F3H9.11 (Putative uncharacterized protein At1g28240)
OS=Arabidopsis thaliana GN=At1g28240/F3H9.11 PE=2 SV=1
Length = 581

Score = 44.7 bits (104), Expect = 0.005
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = +2

Query: 551 PWPWFSSDHPLPLGHPCQGFALPSPPADKKRTG 649
P P + LP GHPC F LP PPAD+KRTG
Sbjct: 132 PPPIHFLGYSLPQGHPCNSFTLPPPPADRKRTG 164


>tr|B4FNS1|B4FNS1_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 176

Score = 41.2 bits (95), Expect = 0.055
Identities = 32/96 (33%), Positives = 39/96 (40%), Gaps = 12/96 (12%)
Frame = +2

Query: 368 QHQNLSMKDIQFSVSSSLHP-------EHETMGVRPTSLSSI-----PPPRESLPKFQKA 511
+H +LS D S SSL P +H +RP S PP R LP +
Sbjct: 65 EHSSLST-DSSSSAPSSLRPAFLSTAQQHPFPWLRPPIRSHSCSWLRPPFRLPLPLSKTL 123

Query: 512 GTPMQRIDSYQHGPWPWFSSDHPLPLGHPCQGFALP 619
P R+D +Q PWP SS P P PC P
Sbjct: 124 AAPKWRLDFFQSSPWPSSSSARPPPSFSPCAAARSP 159


>tr|Q4CZJ9|Q4CZJ9_TRYCR Putative uncharacterized protein
OS=Trypanosoma cruzi GN=Tc00.1047053504201.20 PE=4 SV=1
Length = 149

Score = 38.1 bits (87), Expect = 0.47
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2

Query: 395 IQFSVSSSLHPEHETMGVRPTSLSSIPPPRESLPKFQKAGTPMQRID---SYQHGPWPW 562
+QFS ++HP + T + +PPPRE + GT +++ S+Q+ W W
Sbjct: 57 LQFSPDGTIHPPARSSDADRTGICQLPPPREEKEDTKSGGTTAPQVNAEPSHQNEDWRW 115


>tr|Q5B396|Q5B396_EMENI Putative uncharacterized protein
OS=Emericella nidulans GN=AN4984.2 PE=4 SV=1
Length = 471

Score = 37.7 bits (86), Expect = 0.61
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 12/107 (11%)
Frame = +2

Query: 293 NIT--SRVTAPKSASDYDTPPDMIFNNQHQN--LSMKDIQFSVSSSLH-----PEHETMG 445
NIT +RV+ P + + PP NNQ++N L+ ++S S+ H P++ ++G
Sbjct: 330 NITRSNRVSKPLLSPEGPIPPQYQRNNQYENSWLNPAASEYSPPSAPHSGPTTPDYYSVG 389

Query: 446 VRPTSLSSIPPPRES---LPKFQKAGTPMQRIDSYQHGPWPWFSSDH 577
P SS PPP S +P Q P + SY H P F H
Sbjct: 390 --PWGYSSNPPPPYSSTWMPHHQYMPPPRSQPPSYHHTPSYGFPFPH 434


>tr|B6UCQ3|B6UCQ3_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 174

Score = 37.0 bits (84), Expect = 1.0
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +2

Query: 473 PPPRESLPKFQKAGTPMQRIDSYQHGPWPWFSSDHPLPLGHP 598
PP R LP + P R+D +Q PWP SS P PL P
Sbjct: 18 PPFRPPLPLSKTLAAPKWRLDFFQSSPWPSSSSARPPPLLFP 59