DK958066 |
Clone id |
TST39A01NGRL0030_A11 |
Library |
TST39 |
Length |
643 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0030_A11. 5' end sequence. |
Accession |
DK958066 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1014Contig1 |
Sequence |
GTTTAAACCCCAATCGTATCGCTTCATTAAGTTCTCTTGGCTTGGAGGCGAGAAAAGGAA ATGGCTGCAGTTGGCTACTTTCCTAAAACACAAATTGCTTCAGCAGCTAAGCTCTTTGAG GACCCTTTTCATTCTCATATCTCTTCAAGAAGATGTTTGTGGGCTTTTCCTGCCATATCC AGGAATTCCGTTCTAAGAACAGGTGACAAAATGCAAGCCGTTCTCCAGCGGCACAGAATG GCTCCTCTTTGTCGAGCTGAAAGCCAAGATGAAAGCTCAAGTTCCAGTGTTGGATCAGCA GTTGAAGAAAGACCAACTGCAGATTTGCAGGAGGAGGAAGAAGATTCAGCAAATCAGGGC CCTGGGAGCTTATCATCTTGGCTTTATCCGTCAAAAGATGATCTTCCAGATGATGTGGAG ATGAGCCTTTTTGATCATTTGGATGAGCTTAGAGATCGCATACTTATATCAGTGGCAGTT GTGGGTGTGGCTATTTTGGGTTGTTTTGCTTTTGCAAAGGATCTAATTGTATTTCTGGAG GCACCTGTATATTTGCAAGGTGTTCGCTTTCTACAGCTTTCTCCTGGAGAATATTTTTTC ACAACCATCAAGGTTTCAGGTTACTCTGGTCTTCTCCTTGGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P54086 |
Definition |
sp|P54086|Y194_SYNY3 Uncharacterized protein sll0194 OS=Synechocystis sp. (strain PCC 6803) |
Align length |
81 |
Score (bit) |
100.0 |
E-value |
6.0e-21 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NMM0 |
Definition |
tr|A9NMM0|A9NMM0_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
106 |
Score (bit) |
150.0 |
E-value |
6.0e-35 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958066|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0030_A11, 5' (643 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NMM0|A9NMM0_PICSI Putative uncharacterized protein OS=Picea... 150 6e-35 tr|Q9SJV5|Q9SJV5_ARATH TATC-like protein (CpTatC) OS=Arabidopsis... 148 2e-34 tr|B8A0G3|B8A0G3_MAIZE Putative uncharacterized protein OS=Zea m... 148 2e-34 tr|B6SIW0|B6SIW0_MAIZE Putative uncharacterized protein OS=Zea m... 148 2e-34 tr|A9SMU6|A9SMU6_PHYPA Predicted protein OS=Physcomitrella paten... 147 5e-34 tr|Q9AVE6|Q9AVE6_ORYSJ cDNA clone:J013104L23, full insert sequen... 145 2e-33 tr|B8A8L7|B8A8L7_ORYSI Putative uncharacterized protein OS=Oryza... 145 2e-33 tr|A2ZTJ3|A2ZTJ3_ORYSJ Putative uncharacterized protein OS=Oryza... 145 2e-33 tr|A9RY97|A9RY97_PHYPA Predicted protein (Fragment) OS=Physcomit... 144 6e-33 tr|A5B8A0|A5B8A0_VITVI Putative uncharacterized protein OS=Vitis... 136 1e-30 tr|Q94G17|Q94G17_PEA TatC OS=Pisum sativum GN=tatC PE=2 SV=1 134 4e-30 tr|B7FJT7|B7FJT7_MEDTR Putative uncharacterized protein OS=Medic... 134 6e-30 tr|A4S4D7|A4S4D7_OSTLU Tat family transporter: protein export Ta... 132 2e-29 tr|Q00ZA3|Q00ZA3_OSTTA TATC-like protein (ISS) OS=Ostreococcus t... 129 2e-28 tr|A8J2Y6|A8J2Y6_CHLRE TatC-like sec-independent protein translo... 115 2e-24 tr|A0YZ17|A0YZ17_9CYAN Sec-independent periplasmic protein trans... 110 7e-23 tr|Q8KPU8|Q8KPU8_SYNE7 Sec-independent protein translocase TatC ... 106 1e-21 tr|Q5N642|Q5N642_SYNP6 Sec-independent protein translocase prote... 106 1e-21 tr|B4WJ18|B4WJ18_9SYNE Twin arginine-targeting protein transloca... 105 3e-21 tr|Q8YU98|Q8YU98_ANASP All2456 protein OS=Anabaena sp. (strain P... 102 2e-20 tr|B8HNS1|B8HNS1_9CHRO Sec-independent protein translocase, TatC... 102 2e-20 tr|Q3MG73|Q3MG73_ANAVT Sec-independent protein translocase TatC ... 102 2e-20 tr|B4VMB2|B4VMB2_9CYAN Twin arginine-targeting protein transloca... 102 2e-20 tr|B0JLU5|B0JLU5_MICAN Sec-independent protein translocase OS=Mi... 100 6e-20 tr|B7KKY8|B7KKY8_9CHRO Sec-independent protein translocase, TatC... 100 8e-20 tr|B7JV79|B7JV79_SYNP8 Sec-independent protein translocase, TatC... 100 8e-20 tr|B4C5R3|B4C5R3_9CHRO Sec-independent protein translocase, TatC... 100 8e-20 tr|B4B748|B4B748_9CHRO Sec-independent protein translocase, TatC... 100 1e-19 tr|B2J3K9|B2J3K9_NOSP7 Sec-independent protein translocase, TatC... 99 2e-19 tr|A3ILF6|A3ILF6_9CHRO Putative uncharacterized protein OS=Cyano... 99 2e-19
>tr|A9NMM0|A9NMM0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 372
Score = 150 bits (379), Expect = 6e-35 Identities = 75/106 (70%), Positives = 85/106 (80%) Frame = +1
Query: 325 LQEEEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGC 504 LQ EED +S W+YP K++LPDD EMS+FDHL+ELR+RI +SV VGVAIL C Sbjct: 109 LQSTEEDYQEN---VVSKWIYPGKEELPDDKEMSIFDHLEELRERIFVSVLAVGVAILAC 165
Query: 505 FAFAKDLIVFLEAPVYLQGVRFLQLSPGEYFFTTIKVSGYSGLLLG 642 FAF+KDLI FLEAPV QGVRFLQLSPGE+FFTTIKVSGY GLLLG Sbjct: 166 FAFSKDLIFFLEAPVSSQGVRFLQLSPGEFFFTTIKVSGYCGLLLG 211
>tr|Q9SJV5|Q9SJV5_ARATH TATC-like protein (CpTatC) OS=Arabidopsis thaliana GN=apg2 PE=2 SV=2 Length = 340
Score = 148 bits (374), Expect = 2e-34 Identities = 70/106 (66%), Positives = 87/106 (82%) Frame = +1
Query: 325 LQEEEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGC 504 +++ DS+ S+ +LYP K++LPDD EM++FDHL+ELR+RI +SV VG AILGC Sbjct: 79 VEDRPPDSSEDRSSSVYEFLYPRKEELPDDKEMTIFDHLEELRERIFVSVLAVGAAILGC 138
Query: 505 FAFAKDLIVFLEAPVYLQGVRFLQLSPGEYFFTTIKVSGYSGLLLG 642 FAF+KDLIVFLEAPV QGVRFLQL+PGE+FFTT+KVSGY GLLLG Sbjct: 139 FAFSKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLKVSGYCGLLLG 184
>tr|B8A0G3|B8A0G3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 351
Score = 148 bits (374), Expect = 2e-34 Identities = 75/103 (72%), Positives = 87/103 (84%) Frame = +1
Query: 334 EEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGCFAF 513 +EE SA L ++LYPSKD LPDD EMS+FDHL+ELR+RI ISV VG AILGCFAF Sbjct: 99 QEEQSA------LYNFLYPSKDLLPDDKEMSIFDHLEELRERIFISVLAVGAAILGCFAF 152
Query: 514 AKDLIVFLEAPVYLQGVRFLQLSPGEYFFTTIKVSGYSGLLLG 642 +KDL++FLEAPV +QGVRFLQLSPGE+FFTT+KVSGY GLLLG Sbjct: 153 SKDLVLFLEAPVTVQGVRFLQLSPGEFFFTTLKVSGYCGLLLG 195
>tr|B6SIW0|B6SIW0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 307
Score = 148 bits (374), Expect = 2e-34 Identities = 75/103 (72%), Positives = 87/103 (84%) Frame = +1
Query: 334 EEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGCFAF 513 +EE SA L ++LYPSKD LPDD EMS+FDHL+ELR+RI ISV VG AILGCFAF Sbjct: 99 QEEQSA------LYNFLYPSKDLLPDDKEMSIFDHLEELRERIFISVLAVGAAILGCFAF 152
Query: 514 AKDLIVFLEAPVYLQGVRFLQLSPGEYFFTTIKVSGYSGLLLG 642 +KDL++FLEAPV +QGVRFLQLSPGE+FFTT+KVSGY GLLLG Sbjct: 153 SKDLVLFLEAPVTVQGVRFLQLSPGEFFFTTLKVSGYCGLLLG 195
>tr|A9SMU6|A9SMU6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_132448 PE=4 SV=1 Length = 262
Score = 147 bits (371), Expect = 5e-34 Identities = 70/91 (76%), Positives = 78/91 (85%) Frame = +1
Query: 370 LSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGCFAFAKDLIVFLEAPV 549 LS WLYP +++LPDD EM++FDHL+ELRDR+LISV VGVAI GCF FAKDLIV LE PV Sbjct: 7 LSKWLYPPEEELPDDKEMTIFDHLEELRDRLLISVVAVGVAIAGCFVFAKDLIVLLEKPV 66
Query: 550 YLQGVRFLQLSPGEYFFTTIKVSGYSGLLLG 642 Y GVRFL LSPGEYFFTT+KVSGY GLLLG Sbjct: 67 YSLGVRFLALSPGEYFFTTLKVSGYCGLLLG 97
>tr|Q9AVE6|Q9AVE6_ORYSJ cDNA clone:J013104L23, full insert sequence OS=Oryza sativa subsp. japonica GN=OsTATC PE=2 SV=1 Length = 359
Score = 145 bits (367), Expect = 2e-33 Identities = 74/106 (69%), Positives = 87/106 (82%) Frame = +1
Query: 325 LQEEEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGC 504 + E+EE S SL ++LYPSK+ LPDD EMS+FDHL+ELRDRI +SV VG AILGC Sbjct: 104 ITEDEEQS------SLYNFLYPSKELLPDDKEMSIFDHLEELRDRIFVSVLAVGAAILGC 157
Query: 505 FAFAKDLIVFLEAPVYLQGVRFLQLSPGEYFFTTIKVSGYSGLLLG 642 FA++KDLI LEAPV +QGVRFLQLSPGE+FFTT+KVSGY GLLLG Sbjct: 158 FAYSKDLIRILEAPVSVQGVRFLQLSPGEFFFTTLKVSGYCGLLLG 203
>tr|B8A8L7|B8A8L7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_02087 PE=4 SV=1 Length = 359
Score = 145 bits (367), Expect = 2e-33 Identities = 74/106 (69%), Positives = 87/106 (82%) Frame = +1
Query: 325 LQEEEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGC 504 + E+EE S SL ++LYPSK+ LPDD EMS+FDHL+ELRDRI +SV VG AILGC Sbjct: 104 ITEDEEQS------SLYNFLYPSKELLPDDKEMSIFDHLEELRDRIFVSVLAVGAAILGC 157
Query: 505 FAFAKDLIVFLEAPVYLQGVRFLQLSPGEYFFTTIKVSGYSGLLLG 642 FA++KDLI LEAPV +QGVRFLQLSPGE+FFTT+KVSGY GLLLG Sbjct: 158 FAYSKDLIRILEAPVSVQGVRFLQLSPGEFFFTTLKVSGYCGLLLG 203
>tr|A2ZTJ3|A2ZTJ3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_001865 PE=4 SV=1 Length = 435
Score = 145 bits (367), Expect = 2e-33 Identities = 74/106 (69%), Positives = 87/106 (82%) Frame = +1
Query: 325 LQEEEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGC 504 + E+EE S SL ++LYPSK+ LPDD EMS+FDHL+ELRDRI +SV VG AILGC Sbjct: 180 ITEDEEQS------SLYNFLYPSKELLPDDKEMSIFDHLEELRDRIFVSVLAVGAAILGC 233
Query: 505 FAFAKDLIVFLEAPVYLQGVRFLQLSPGEYFFTTIKVSGYSGLLLG 642 FA++KDLI LEAPV +QGVRFLQLSPGE+FFTT+KVSGY GLLLG Sbjct: 234 FAYSKDLIRILEAPVSVQGVRFLQLSPGEFFFTTLKVSGYCGLLLG 279
>tr|A9RY97|A9RY97_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_121137 PE=4 SV=1 Length = 258
Score = 144 bits (362), Expect = 6e-33 Identities = 68/92 (73%), Positives = 79/92 (85%) Frame = +1
Query: 367 SLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGCFAFAKDLIVFLEAP 546 SLS WLYP +++LPDD EM++FDHL+ELR+R+L+SV VG AILGCF FAKDLIV LE P Sbjct: 2 SLSKWLYPPEEELPDDKEMTIFDHLEELRERLLVSVLAVGAAILGCFVFAKDLIVLLEKP 61
Query: 547 VYLQGVRFLQLSPGEYFFTTIKVSGYSGLLLG 642 V GVRFL LSPGEYFFTT+KVSGY+GLLLG Sbjct: 62 VSPLGVRFLALSPGEYFFTTLKVSGYTGLLLG 93
>tr|A5B8A0|A5B8A0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043107 PE=4 SV=1 Length = 352
Score = 136 bits (342), Expect = 1e-30 Identities = 71/117 (60%), Positives = 87/117 (74%), Gaps = 6/117 (5%) Frame = +1
Query: 310 RPTAD------LQEEEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILIS 471 RP A+ LQ ++D G L +LYPSK+ LPDD EMS+FDHL+ELR RI +S Sbjct: 83 RPVAEDSGEDTLQNVDQDKKENG---LYDFLYPSKELLPDDKEMSIFDHLEELRQRIFVS 139
Query: 472 VAVVGVAILGCFAFAKDLIVFLEAPVYLQGVRFLQLSPGEYFFTTIKVSGYSGLLLG 642 V VG A+LG FAF+K+L++ LEAPV QGVRFLQL+PGE+FFTT+KVSGY GLLLG Sbjct: 140 VLAVGAAMLGSFAFSKELVMILEAPVKEQGVRFLQLAPGEFFFTTLKVSGYCGLLLG 196
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