DK957926
Clone id TST39A01NGRL0029_K12
Library
Length 657
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_K12. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
AAAAACTCCTTCATGCGTTCCCATTCCGGATCTGTAATCCCTTTCATGTGTGAAGGCTCA
TGTGCAATACTGCTTCACCACCTCCGTAGCGCTCCTTGCTTTCACCGTTTTGGTTTGCAA
CTCTACCTTAACACTCCTCTGTAATCATCTTGATGGCCTGGCCTGCAGCAATGCCTTCGA
TCCCCTCTTGCTCACGAGTCCTTTCTCTTATTGCATGTCCACCTTGCCTGCCGTCTCATG
TTCAGGCCGTCTCTTCTTGCAGCTTTCGGCCCTCACTATAGCATCCCACCTCAGGTAGCC
TTACTGCTCCTTCTTCTCTCCCCTTTCGAGCCTTCAGAGCTACTTCACTCTATTGTGCTA
CAAGGTAGCCCTCCAACCTTCTCATGCACCCAACCTTCCTTTTCTAGGGAGCTACCTCCT
GCAGCAGATGCCGCGCTAGTGGGTGTCCTCGTAGGTCCGATGCCCAAGAGTTGATGCCAC
GTGGCCGTTTGTAATAAGTCAAAGTGAATGAATTTTAACCCACTAGTAAATTCACTATGG
TATAGCGCGCCTTGTGAAGTCTTGTCAATGTTCTGTTCCAGCGGTAACAAGCGCGCCTGA
TTGCCAACGATGGAATGCAGCCTCCTCTGAACTTCGCATGAACAAGCTTTTGTTTTG
■■Homology search results ■■ -
sp_hit_id Q11068
Definition sp|Q11068|MGAT1_CAEEL Putative alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase OS=Caenorhabditis elegans
Align length 42
Score (bit) 34.7
E-value 0.45
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957926|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_K12, 5'
(657 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q11068|MGAT1_CAEEL Putative alpha-1,3-mannosyl-glycoprotein 2... 35 0.45
sp|A6QB59|ATPB_SULNB ATP synthase subunit beta OS=Sulfurovum sp.... 33 1.7
sp|O95625|ZBT11_HUMAN Zinc finger and BTB domain-containing prot... 32 3.0

>sp|Q11068|MGAT1_CAEEL Putative alpha-1,3-mannosyl-glycoprotein
2-beta-N-acetylglucosaminyltransferase OS=Caenorhabditis
elegans GN=gly-13 PE=2 SV=2
Length = 449

Score = 34.7 bits (78), Expect = 0.45
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -2

Query: 578 EQNIDKTSQGALYHSEFTSGLKFIHFDLLQTATWHQLLGIGP 453
++NID T+ LY S+F +GL + ++ + TWH+L I P
Sbjct: 237 QENIDMTAASTLYRSDFFAGLGW----MMSSKTWHELEPIWP 274


>sp|A6QB59|ATPB_SULNB ATP synthase subunit beta OS=Sulfurovum sp.
(strain NBC37-1) GN=atpD PE=3 SV=1
Length = 466

Score = 32.7 bits (73), Expect = 1.7
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Frame = -3

Query: 208 RERTREQEGIEGIAAGQAIKM--------ITEEC*GRVANQNGESKERYGGGEAVLHMSL 53
R RT + EG+ GQ +K + EE GR+ N GE+ + G EA H S+
Sbjct: 53 RVRTIAMDMSEGVVRGQEVKATGDSIQVPVGEEVLGRIFNVIGEAIDEAGPVEAKTHWSI 112

Query: 52 H 50
H
Sbjct: 113 H 113


>sp|O95625|ZBT11_HUMAN Zinc finger and BTB domain-containing protein
11 OS=Homo sapiens GN=ZBTB11 PE=1 SV=2
Length = 1053

Score = 32.0 bits (71), Expect = 3.0
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -1

Query: 141 QRSVKVELQTKTVKARSATEVVKQYCT*AFTHERDYRSGMGTHEGV 4
+R VK K +A+ E V + C FT R+YR M HEGV
Sbjct: 838 RRHVKKATHGKKGRAKQNLERVCEKCGRKFTQLREYRRHMNNHEGV 883


tr_hit_id Q248I2
Definition tr|Q248I2|Q248I2_TETTH Cation channel family protein OS=Tetrahymena thermophila SB210
Align length 72
Score (bit) 34.3
E-value 6.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957926|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_K12, 5'
(657 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q248I2|Q248I2_TETTH Cation channel family protein OS=Tetrahym... 34 6.9
tr|Q478F7|Q478F7_DECAR Diguanylate cyclase/phosphodiesterase wit... 34 9.0
tr|B6KJY4|B6KJY4_TOXGO Putative uncharacterized protein OS=Toxop... 34 9.0
tr|B0VT83|B0VT83_ACIBS Tolerance to group A colicins, single-str... 34 9.1

>tr|Q248I2|Q248I2_TETTH Cation channel family protein OS=Tetrahymena
thermophila SB210 GN=TTHERM_00531830 PE=4 SV=1
Length = 707

Score = 34.3 bits (77), Expect = 6.9
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Frame = -2

Query: 647 ACSCEVQRRLHS---IVGNQARLLPLEQNIDKTSQGALYHS--EFTSGLKFIHFDLLQTA 483
A SCE +++ + + NQ + L + DK QG+ YHS E S L+ I L
Sbjct: 568 AFSCETFKKITNEDYVYRNQRKQLDFYEQEDKAVQGSAYHSLQELYSDLEVIKGSHLNKQ 627

Query: 482 TWHQLLGIGPTR 447
+H ++ GP +
Sbjct: 628 AYHHIIDNGPEK 639


>tr|Q478F7|Q478F7_DECAR Diguanylate cyclase/phosphodiesterase with
PAS/PAC sensor(S) OS=Dechloromonas aromatica (strain
RCB) GN=Daro_4048 PE=4 SV=1
Length = 739

Score = 33.9 bits (76), Expect = 9.0
Identities = 25/70 (35%), Positives = 33/70 (47%)
Frame = -3

Query: 460 SDLRGHPLARHLLQEVAP*KRKVGCMRRLEGYLVAQ*SEVALKARKGREEGAVRLPEVGC 281
+D GH + HLL EVA +R C+R E AR+G +E V L E+G
Sbjct: 337 NDTLGHDVGDHLLVEVA--RRLSACIR-----------EGDTAARQGGDEFVVMLEELGS 383

Query: 280 YSEGRKLQEE 251
EG +Q E
Sbjct: 384 EQEGAAVQAE 393


>tr|B6KJY4|B6KJY4_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_032980 PE=4 SV=1
Length = 1202

Score = 33.9 bits (76), Expect = 9.0
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3

Query: 210 IACPPC-LPSHVQAVSSCSFRPSL*HPTSGSLTAPSSL 320
++ P C LPS Q + +C P+L HP+S S +PSSL
Sbjct: 636 VSFPDCGLPSSFQDIKACPVPPALSHPSSPSSHSPSSL 673


>tr|B0VT83|B0VT83_ACIBS Tolerance to group A colicins,
single-stranded filamentous DNA phage, required for OM
integrity OS=Acinetobacter baumannii (strain SDF)
GN=tolA PE=4 SV=1
Length = 430

Score = 33.9 bits (76), Expect = 9.1
Identities = 23/87 (26%), Positives = 40/87 (45%)
Frame = -1

Query: 333 RLERGEKKEQ*GYLRWDAIVRAESCKKRRPEHETAGKVDMQ*EKGLVSKRGSKALLQARP 154
RLE +K++ + +A RAE+ +KR+ E + D + + + KA +AR
Sbjct: 137 RLEEAQKQQAEAKRQAEAKARAEAEQKRKAEQNAKAEADAKARQKATEEAKRKAETEARL 196

Query: 153 SR*LQRSVKVELQTKTVKARSATEVVK 73
R Q++ +LQ + R A K
Sbjct: 197 KREAQKAENAKLQAQQEAKRKAAADAK 223