DK957916 |
Clone id |
TST39A01NGRL0029_K02 |
Library |
TST39 |
Length |
677 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_K02. 5' end sequence. |
Accession |
DK957916 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GAACATCCTCTTCTTATATCTTTTAACTCTAGCTCTTCATCACTTACATCTTCACCAGCT CTGCAAGACAGCAGTCCATAATCTTCCTTTTTGGAACGCTCTTCCATCAATATGCAGGCA CAGGAAGTACCCCCTTCTGCTGCTACTGGATTGGGTGTCCCGCTCCAGGAAGTCGGTCCG GAACATGCTGTGGGCACAGAGGAGCAGCCCGATAATGGGCACAAGAAGAAATCGGTTATC GGGAAGGTGAAGGAGAAGGCTAAGAAACTCAAAACTAAGATCAAGAAGCCCAAATCACCG GGTGCAGCAGGAGAAAACAATGATGAGTCCAGCAGCGGTGAAGAGGAAGACAGCGGAAGT GACGAGCAGCAATCAGGCGAGCGAGCTGGGGAGGAACAAGATGTGGTTGTGGAGCCTGGG CCAAAGGGGCAGGCCTATGAAGCTATTCCTGATCCCCATGTAGATCCTGCTGCTGGTGTG CACGAGCGTTTGGCTCAACTGCAGTTGGGAGATGAGCCTGAGGCCACAAAGCCAAAGGAG GCACCAGGTGTCTCTCCTTATATTGCGAGTGGGCAGACCACAGAAGCTAGCCAAGGTATC CCAGTTGAAGAAGGCAAAACCGCTGATGGAAAGGATTTAGTTGTCACACCTTCTGCTTCT GATGACAAGGCTGGAGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9PU36 |
Definition |
sp|Q9PU36|PCLO_CHICK Protein piccolo (Fragment) OS=Gallus gallus |
Align length |
89 |
Score (bit) |
34.3 |
E-value |
0.62 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957916|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0029_K02, 5' (677 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9PU36|PCLO_CHICK Protein piccolo (Fragment) OS=Gallus gallus... 34 0.62 sp|Q15772|SPEG_HUMAN Striated muscle preferentially expressed pr... 33 1.1 sp|Q05175|BASP_RAT Brain acid soluble protein 1 OS=Rattus norveg... 32 2.4 sp|Q8K4K4|TRIB1_MOUSE Tribbles homolog 1 OS=Mus musculus GN=Trib... 32 3.1 sp|O88339|EPN1_RAT Epsin-1 OS=Rattus norvegicus GN=Epn1 PE=1 SV=1 32 3.1 sp|Q13105|ZBT17_HUMAN Zinc finger and BTB domain-containing prot... 32 4.0 sp|Q09321|YR51_CAEEL Uncharacterized protein F42A8.1 OS=Caenorha... 31 6.9 sp|Q6AJY4|IF2_DESPS Translation initiation factor IF-2 OS=Desulf... 31 6.9 sp|Q8MSX1|ENC_DROME Protein encore OS=Drosophila melanogaster GN... 31 6.9 sp|Q2QLW3|DOHHB_ORYSJ Deoxyhypusine hydroxylase-B OS=Oryza sativ... 31 6.9 sp|Q89BU5|OPGH_BRAJA Glucans biosynthesis glucosyltransferase H ... 30 9.0 sp|Q80VP1|EPN1_MOUSE Epsin-1 OS=Mus musculus GN=Epn1 PE=1 SV=3 30 9.0 sp|Q9Y6I3|EPN1_HUMAN Epsin-1 OS=Homo sapiens GN=EPN1 PE=1 SV=1 30 9.0 sp|Q3U1Y4|DEN4B_MOUSE DENN domain-containing protein 4B OS=Mus m... 30 9.0
>sp|Q9PU36|PCLO_CHICK Protein piccolo (Fragment) OS=Gallus gallus GN=PCLO PE=2 SV=1 Length = 5120
Score = 34.3 bits (77), Expect = 0.62 Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 9/89 (10%) Frame = +1
Query: 418 GPKGQAYEAIPDPHVDPAAGVHERLAQLQLGDEPEATKPKEAPGVS---PYIASGQ---- 576 GP + P P V + P ATKPKE P V P + G+ Sbjct: 908 GPSQPVSKPPATPQKQPVPAVSHSPQKSSTPPTPAATKPKEEPSVPKEVPKLQQGKLEKT 967
Query: 577 --TTEASQGIPVEEGKTADGKDLVVTPSA 657 + QGI E+ K+ GK L TPSA Sbjct: 968 LSADKIQQGIQKEDAKSKQGK-LFKTPSA 995
>sp|Q15772|SPEG_HUMAN Striated muscle preferentially expressed protein kinase OS=Homo sapiens GN=SPEG PE=1 SV=4 Length = 3267
Score = 33.5 bits (75), Expect = 1.1 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = +1
Query: 391 EEQDVVVEPGPKGQAYEAIPDPHVDPAAGVHERLAQLQLGDEPEATKPKEAP 546 +EQ + + EA+P P +PAAG R +L+ G E+ P+ P Sbjct: 1974 QEQGRAPSQDQEAPSPEALPSPGQEPAAGASPRRGELRRGSSAESALPRAGP 2025
>sp|Q05175|BASP_RAT Brain acid soluble protein 1 OS=Rattus norvegicus GN=Basp1 PE=1 SV=2 Length = 220
Score = 32.3 bits (72), Expect = 2.4 Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 3/86 (3%) Frame = +1
Query: 424 KGQAYEAIPDPHVDPAAGVHERLAQLQLGDEPEATKPKEAPG-VSPYI--ASGQTTEASQ 594 K A E P + + G E + E EA P A G +P AS ++T A+ Sbjct: 76 KAAAKEEAPKAEPEKSEGAAEEQPEPAPAPEQEAAAPGPAAGGEAPKAGEASAESTGAAD 135
Query: 595 GIPVEEGKTADGKDLVVTPSASDDKA 672 G P EEG+ + P A D A Sbjct: 136 GAPQEEGEAKKTEAPAAGPEAKSDAA 161
>sp|Q8K4K4|TRIB1_MOUSE Tribbles homolog 1 OS=Mus musculus GN=Trib1 PE=2 SV=2 Length = 372
Score = 32.0 bits (71), Expect = 3.1 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = -1
Query: 221 CP-LSGCSSVPTACSGPTSWSGTPNPVAAEGGTSCACILMEERSKKEDYGLLSCRAGEDV 45 CP LS CSS P S P S +P P + GT +C+ S+ DY LL E V Sbjct: 47 CPRLSECSSPPDYLSPPGS-PCSPQPPPSTQGTGGSCVSSPGPSRIADYLLLPLAEREHV 105
Query: 44 S 42 S Sbjct: 106 S 106
>sp|O88339|EPN1_RAT Epsin-1 OS=Rattus norvegicus GN=Epn1 PE=1 SV=1 Length = 575
Score = 32.0 bits (71), Expect = 3.1 Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Frame = -1
Query: 218 PLSGCSSVPTACSGPT--SWSGTPNPVAAEGGTS 123 P SG P A +GP+ W GTP P A EG TS Sbjct: 315 PASGDPWRPAAPTGPSVDPWGGTPAPAAGEGPTS 348
>sp|Q13105|ZBT17_HUMAN Zinc finger and BTB domain-containing protein 17 OS=Homo sapiens GN=ZBTB17 PE=1 SV=3 Length = 803
Score = 31.6 bits (70), Expect = 4.0 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Frame = +1
Query: 394 EQDVVVEPGPKGQAYEAIPDPHVDPAAG---VHERLAQLQLGDEPEATKPKEAPG 549 EQ++ VEP KG+ + + + AG V E +QL+ G+ PE + +E+ G Sbjct: 219 EQEMEVEPARKGEEEQKEQEEQEEEGAGPAEVKEEGSQLENGEAPEENENEESAG 273
>sp|Q09321|YR51_CAEEL Uncharacterized protein F42A8.1 OS=Caenorhabditis elegans GN=F42A8.1 PE=2 SV=1 Length = 370
Score = 30.8 bits (68), Expect = 6.9 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = -3
Query: 132 GYFLCLHIDGRAFQKGRLWT 73 GY C+ DGR +QKG WT Sbjct: 105 GYSACVGTDGRTYQKGETWT 124
>sp|Q6AJY4|IF2_DESPS Translation initiation factor IF-2 OS=Desulfotalea psychrophila GN=infB PE=3 SV=1 Length = 939
Score = 30.8 bits (68), Expect = 6.9 Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 10/106 (9%) Frame = +1
Query: 382 RAGEEQDVVVEPGPKGQAYEAIPDPHVDPAAGVHERLAQLQLGDEPEATKPKEAPGVSPY 561 +A + + V+ E P + E + + A E +QL+ +P K + A P Sbjct: 118 KAEKSEPVIQEVAPVVE--ELVTNKEAPTAPLEREEESQLK-AQKPTIEKEESAAVAKPE 174
Query: 562 IASGQTTEASQGIP----------VEEGKTADGKDLVVTPSASDDK 669 + S + E G P VE+ KTA V TP+++D K Sbjct: 175 VVSAGSNEKKAGAPEIKRAEHTETVEKSKTAVDSKKVATPASTDKK 220
>sp|Q8MSX1|ENC_DROME Protein encore OS=Drosophila melanogaster GN=enc PE=1 SV=2 Length = 1818
Score = 30.8 bits (68), Expect = 6.9 Identities = 17/51 (33%), Positives = 20/51 (39%) Frame = +1
Query: 421 PKGQAYEAIPDPHVDPAAGVHERLAQLQLGDEPEATKPKEAPGVSPYIASG 573 P+G Y A P P V A G + L QL P A +P I G Sbjct: 1007 PQGMVYAAYPQPGVGTAGGASQPLFQLTTSSHPPAQTIFASPEAGAEIPGG 1057
>sp|Q2QLW3|DOHHB_ORYSJ Deoxyhypusine hydroxylase-B OS=Oryza sativa subsp. japonica GN=Os12g0626100 PE=2 SV=1 Length = 302
Score = 30.8 bits (68), Expect = 6.9 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Frame = +1
Query: 460 VDPAAGVHERLA-QLQLGDEPEATKPKEAPGVSPYIASGQTTEASQGIPVEE 612 VDPA V E ++ +E + T E+ VSP+++ A QG+PVE+ Sbjct: 108 VDPAVEVQETCELAIRRIEEQKNTSGVESATVSPFLSVDPALPAKQGLPVEQ 159
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q31LI9 |
Definition |
tr|Q31LI9|Q31LI9_SYNE7 Putative uncharacterized protein OS=Synechococcus elongatus (strain PCC 7942) |
Align length |
61 |
Score (bit) |
41.2 |
E-value |
0.061 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957916|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0029_K02, 5' (677 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q31LI9|Q31LI9_SYNE7 Putative uncharacterized protein OS=Synec... 41 0.061 tr|B6HRS8|B6HRS8_PENCH Pc22g03720 protein OS=Penicillium chrysog... 40 0.10 tr|A9EWS2|A9EWS2_SORC5 Protein kinase OS=Sorangium cellulosum (s... 39 0.39 tr|Q5WRN5|Q5WRN5_CAEEL Putative uncharacterized protein srab-26 ... 39 0.39 tr|B4PV00|B4PV00_DROYA GE23539 OS=Drosophila yakuba GN=GE23539 P... 37 0.88 tr|Q5U5B1|Q5U5B1_XENLA LOC495313 protein OS=Xenopus laevis GN=LO... 36 2.0 tr|A8TWB0|A8TWB0_9PROT TonB-like protein OS=alpha proteobacteriu... 35 3.3 tr|A3NNN2|A3NNN2_BURP6 Probable protein kinase OS=Burkholderia p... 35 4.4 tr|A6G733|A6G733_9DELT Segregation and condensation protein A OS... 35 4.4 tr|A6R8B1|A6R8B1_AJECN Predicted protein OS=Ajellomyces capsulat... 35 4.4 tr|A2Q9W9|A2Q9W9_ASPNC Contig An01c0310, complete genome OS=Aspe... 35 4.4 tr|B1J1S7|B1J1S7_PSEPW Septum site-determining protein MinC OS=P... 35 5.7 tr|Q76KZ5|Q76KZ5_STRHA Polyketide synthase modules 4 OS=Streptom... 35 5.7 tr|B7NZH2|B7NZH2_RABIT SPEG complex locus (Predicted) OS=Oryctol... 35 5.7 tr|A0FCL3|A0FCL3_STRVO MerC OS=Streptomyces violaceoniger GN=mer... 34 7.4 tr|A5D783|A5D783_BOVIN AMPH protein OS=Bos taurus GN=AMPH PE=2 SV=1 34 7.4 tr|B3NTP5|B3NTP5_DROER GG19638 OS=Drosophila erecta GN=GG19638 P... 34 7.4 tr|Q47QN3|Q47QN3_THEFY Putative uncharacterized protein OS=Therm... 34 9.7 tr|B2GGL4|B2GGL4_KOCRD Putative uncharacterized protein OS=Kocur... 34 9.7 tr|B6QUY9|B6QUY9_PENMA cAMP-dependent protein kinase pathway pro... 34 9.7
>tr|Q31LI9|Q31LI9_SYNE7 Putative uncharacterized protein OS=Synechococcus elongatus (strain PCC 7942) GN=Synpcc7942_2050 PE=4 SV=1 Length = 487
Score = 41.2 bits (95), Expect = 0.061 Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 10/61 (16%) Frame = +1
Query: 514 EPEATK--PKEAPGV-SPYIASGQTTEASQGIPVE-------EGKTADGKDLVVTPSASD 663 EPEAT P+ AP V P + S Q +E S +P E EG TAD +D + PSA++ Sbjct: 365 EPEATPVAPELAPEVPEPSVLSEQASEPSTAVPTESPTVSDAEGATADSEDAAIAPSATE 424
Query: 664 D 666 D Sbjct: 425 D 425
>tr|B6HRS8|B6HRS8_PENCH Pc22g03720 protein OS=Penicillium chrysogenum Wisconsin 54-1255 GN=Pc22g03720 PE=4 SV=1 Length = 1373
Score = 40.4 bits (93), Expect = 0.10 Identities = 29/69 (42%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Frame = +1
Query: 412 EPGPKGQAYEAIPDPHVDPAAG--VHERLAQLQLGDEPEATKPKEAPGVSPYIASGQTTE 585 EP P A EA P+P PAA V E+ + Q EPEAT +E P P A+ E Sbjct: 506 EPEP---ATEAAPEPEASPAAEEKVPEKTVKEQ---EPEATPVEETPAAEPEAAAEDKVE 559
Query: 586 ASQGIPVEE 612 A + PVEE Sbjct: 560 AVEPEPVEE 568
>tr|A9EWS2|A9EWS2_SORC5 Protein kinase OS=Sorangium cellulosum (strain So ce56) GN=sce4183 PE=4 SV=1 Length = 527
Score = 38.5 bits (88), Expect = 0.39 Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 1/90 (1%) Frame = +1
Query: 394 EQDVVVEPGPKGQAYEAIPDPH-VDPAAGVHERLAQLQLGDEPEATKPKEAPGVSPYIAS 570 E++ GP+G A P+P P+AG R AQ G EP +P AP P Sbjct: 388 ERETAASAGPQG----AFPEPRPAQPSAGPEPRPAQPSAGPEPRPAQPSAAPEPRP---- 439
Query: 571 GQTTEASQGIPVEEGKTADGKDLVVTPSAS 660 E S G + + D V P+AS Sbjct: 440 ---VEPSAGPEPRPAQPSAAPDAAVEPAAS 466
>tr|Q5WRN5|Q5WRN5_CAEEL Putative uncharacterized protein srab-26 OS=Caenorhabditis elegans GN=srab-26 PE=4 SV=2 Length = 331
Score = 38.5 bits (88), Expect = 0.39 Identities = 21/73 (28%), Positives = 38/73 (52%) Frame = -3
Query: 675 SSLVIRSRRCDN*ILSISGFAFFNWDTLASFCGLPTRNIRRDTWCLLWLCGLRLISQLQL 496 SS +++ N +++ GF F W +L + G T+N ++ LR+I+Q+ L Sbjct: 13 SSTALKTSMAFNLTIALIGFPLFGWSSLKLWTGAYTQNFHKN---------LRIIAQMHL 63
Query: 495 SQTLVHTSSRIYM 457 + L+H S RI + Sbjct: 64 TGFLLHCSGRIML 76
>tr|B4PV00|B4PV00_DROYA GE23539 OS=Drosophila yakuba GN=GE23539 PE=4 SV=1 Length = 2641
Score = 37.4 bits (85), Expect = 0.88 Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 15/105 (14%) Frame = +1
Query: 403 VVVEPGPKGQAYEAIPDPHVDPAAGV-HERLAQLQLGDEPEATKPKE-------APG--- 549 +V P P+G E +P P P V E L ++ +A+ +E AP Sbjct: 406 IVTTPEPEGSGEEDVPKPDEIPEKEVTEEELIKVSTAAPAKASPEEEVVKATTLAPSEED 465
Query: 550 VSPYIASGQTTEASQG--IPVEEGKTADGKDLVVT--PSASDDKA 672 V P A + E +G P EEG + KD+ VT P AS+D+A Sbjct: 466 VKPTTAGTTSEEEEEGKPTPAEEGSGDEEKDVQVTAAPEASEDEA 510
>tr|Q5U5B1|Q5U5B1_XENLA LOC495313 protein OS=Xenopus laevis GN=LOC495313 PE=2 SV=1 Length = 878
Score = 36.2 bits (82), Expect = 2.0 Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Frame = -3
Query: 633 LSISGFAFFNWDTLASF-CGLPTRNIRRDTWCLLWLCGLRL-ISQLQLSQTLVHTSSRIY 460 + +S F+NW+TL S CG P RNIR DT L L G R +SQ+Q + ++ + I Sbjct: 215 MDLSDNYFYNWETLGSDRCGNPFRNIRFDT---LLLSGNRFGVSQMQKFSSALNGTKIIQ 271
Query: 459 MGIRNSFIG 433 + + + +G Sbjct: 272 LKLCHHIMG 280
>tr|A8TWB0|A8TWB0_9PROT TonB-like protein OS=alpha proteobacterium BAL199 GN=BAL199_28320 PE=4 SV=1 Length = 323
Score = 35.4 bits (80), Expect = 3.3 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 17/96 (17%) Frame = +1
Query: 418 GPKGQAYEAIPDPHVDPAAGVHERLA-----------------QLQLGDEPEATKPKEAP 546 GP+ A +A+P P +P+ E + + + PE KP+ Sbjct: 61 GPRQDAMKAVPAPTAEPSPATAEPVTPPVPQALEPPKPETVAETVSAAEPPELIKPEAIE 120
Query: 547 GVSPYIASGQTTEASQGIPVEEGKTADGKDLVVTPS 654 V P + E Q +P+ E + + +D VV P+ Sbjct: 121 PVKPTVVKAPAPEV-QPVPMPEAEMVEARDAVVPPT 155
>tr|A3NNN2|A3NNN2_BURP6 Probable protein kinase OS=Burkholderia pseudomallei (strain 668) GN=BURPS668_A2962 PE=4 SV=1 Length = 865
Score = 35.0 bits (79), Expect = 4.4 Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 2/86 (2%) Frame = +1
Query: 385 AGEEQDVVVE--PGPKGQAYEAIPDPHVDPAAGVHERLAQLQLGDEPEATKPKEAPGVSP 558 AG+E G G+A E PD D A ER Q G +P T P+ P S Sbjct: 402 AGDESGAAAARWQGDDGRADER-PDESTDEPAARAERAMAAQSGAQPAQT-PRPPPQASE 459
Query: 559 YIASGQTTEASQGIPVEEGKTADGKD 636 A+ ++A G P ADG+D Sbjct: 460 RGAAATRSDADSGAPSPRPWAADGRD 485
>tr|A6G733|A6G733_9DELT Segregation and condensation protein A OS=Plesiocystis pacifica SIR-1 GN=PPSIR1_09021 PE=4 SV=1 Length = 495
Score = 35.0 bits (79), Expect = 4.4 Identities = 30/89 (33%), Positives = 35/89 (39%) Frame = +1
Query: 409 VEPGPKGQAYEAIPDPHVDPAAGVHERLAQLQLGDEPEATKPKEAPGVSPYIASGQTTEA 588 VEP P EA P+P PA E L EPE EAP +P + + T A Sbjct: 407 VEPEPTEATAEA-PEPEPGPAEATVEALEA-----EPELEPTVEAPEAAPEPEALEATPA 460
Query: 589 SQGIPVEEGKTADGKDLVVTPSASDDKAG 675 S+ P E A TP A D G Sbjct: 461 SEATPEPEAPEA-------TPEAGRDNEG 482
>tr|A6R8B1|A6R8B1_AJECN Predicted protein OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=HCAG_06552 PE=4 SV=1 Length = 1827
Score = 35.0 bits (79), Expect = 4.4 Identities = 25/86 (29%), Positives = 34/86 (39%) Frame = +1
Query: 415 PGPKGQAYEAIPDPHVDPAAGVHERLAQLQLGDEPEATKPKEAPGVSPYIASGQTTEASQ 594 P P +++EA P P + P V + + EAT P P + G +TE Sbjct: 586 PAPS-ESHEAAPKPEITPEIPVVSATEEPEAPTSEEATIPDVEPVTQQDVIPG-STEPES 643
Query: 595 GIPVEEGKTADGKDLVVTPSASDDKA 672 + EE D D VV DD A Sbjct: 644 LVETEEPVVPDSSDEVVASKPEDDAA 669
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