DK957899
Clone id TST39A01NGRL0029_J09
Library
Length 523
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_J09. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
CCCAAGGTCACGAGGCTCACAACACCTCTCGATATCACGACGGAGATCGAGGAAGTGCAA
CTAGACTCCCTCAAAGTGGAATTGAACATCGAGTATCCTTCTGAGTACATGGCAAATGCC
GTTAAAACAGCCCTTGCAGTTGATGGAGAGCTTCAGCCTGACAAAGTGAAGAGGGAGATG
TGTGTAGAAGGCAACTTCCTGAACATTAAATTTGTGGCAAATGAAGCAAGGTATCTGCGA
GCTTCATTTAGTGCTTTCATGGATGTGCTTGTTTTGGCAACTCGCACAATTGAGGAGTTT
GGTCGTTAAAGCGTGGTATTCTGCCTCACAGAGGCATCAACCTGGAGTGCTTGACAAGAT
ATCTGTCTCCCTCTTAGTGGCTGCATCAAGGTTTAAACACGTGGCTGGATAAACTCTGCG
CTCGAAAGTGTAACAGTATCATATGCTGCTCTTTCTACTCAAGAAAGATGAGAAAGAAAA
AGATTGTGCTGATGGGGAGGCTGAGTTGCTGCTTTATATTGGA
■■Homology search results ■■ -
sp_hit_id Q14657
Definition sp|Q14657|LAGE3_HUMAN L antigen family member 3 OS=Homo sapiens
Align length 74
Score (bit) 45.4
E-value 0.0002
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957899|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_J09, 5'
(523 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q14657|LAGE3_HUMAN L antigen family member 3 OS=Homo sapiens ... 45 2e-04
sp|Q753M3|PCC1_ASHGO Polarized growth chromatin-associated contr... 41 0.003
sp|P39076|TCPB_YEAST T-complex protein 1 subunit beta OS=Sacchar... 31 4.0
sp|Q6KIG2|RL31_MYCMO 50S ribosomal protein L31 OS=Mycoplasma mob... 30 5.3
sp|Q96WV6|YHU2_SCHPO Uncharacterized threonine-rich GPI-anchored... 30 9.0

>sp|Q14657|LAGE3_HUMAN L antigen family member 3 OS=Homo sapiens
GN=LAGE3 PE=1 SV=2
Length = 143

Score = 45.4 bits (106), Expect = 2e-04
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = +1

Query: 82 LNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARYLRASFSAFM 261
L++ +P+ A +LA D E V +++ V G L +++ A + R LR S F+
Sbjct: 65 LSVPFPTPLEAEIAHGSLAPDAEPHQRVVGKDLTVSGRILVVRWKAEDCRLLRISVINFL 124

Query: 262 DVLVLATRTIEEFG 303
D L L RT++ FG
Sbjct: 125 DQLSLVVRTMQRFG 138


>sp|Q753M3|PCC1_ASHGO Polarized growth chromatin-associated
controller 1 OS=Ashbya gossypii GN=PCC1 PE=3 SV=1
Length = 81

Score = 41.2 bits (95), Expect = 0.003
Identities = 22/74 (29%), Positives = 39/74 (52%)
Frame = +1

Query: 76 VELNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARYLRASFSA 255
+ L++ + S +A+ ALA D L+P+++ +G LNIK A +AR LR + ++
Sbjct: 5 LHLHVPFESARLADIAARALAPDPLLRPEELSVSFASDGASLNIKLAAIDARVLRVATNS 64

Query: 256 FMDVLVLATRTIEE 297
+ L T +E
Sbjct: 65 IFEALKTVVETADE 78


>sp|P39076|TCPB_YEAST T-complex protein 1 subunit beta
OS=Saccharomyces cerevisiae GN=CCT2 PE=1 SV=1
Length = 527

Score = 30.8 bits (68), Expect = 4.0
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = -3

Query: 290 IVRVAKTSTSMKALNEARRYLASFATNLMFRKLPST---HISLFTLSG 156
++ +AKT+ S K L++ + + A ATN + R ST HI + + G
Sbjct: 153 LIHIAKTTLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILG 200


>sp|Q6KIG2|RL31_MYCMO 50S ribosomal protein L31 OS=Mycoplasma mobile
GN=rpmE PE=3 SV=1
Length = 70

Score = 30.4 bits (67), Expect = 5.3
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2

Query: 321 EYHALTTKLLNCASCQNKHIHEST-K*SSQIPCFICHKF 208
EY +T L C++C+ KHI ST K SS C CH F
Sbjct: 8 EYKNIT---LTCSTCEKKHIFGSTAKKSSVDVCSNCHPF 43


>sp|Q96WV6|YHU2_SCHPO Uncharacterized threonine-rich GPI-anchored
glycoprotein PJ4664.02 OS=Schizosaccharomyces pombe
GN=SPBPJ4664.02 PE=2 SV=1
Length = 3971

Score = 29.6 bits (65), Expect = 9.0
Identities = 28/121 (23%), Positives = 50/121 (41%)
Frame = -3

Query: 437 TVTLSSAEFIQPRV*TLMQPLRGRQISCQALQVDASVRQNTTL*RPNSSIVRVAKTSTSM 258
TV SS V P+ + + + +S NT+ +S++V + TS+
Sbjct: 2512 TVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSL 2571

Query: 257 KALNEARRYLASFATNLMFRKLPSTHISLFTLSG*SSPSTARAVLTAFAMYSEGYSMFNS 78
ALN + +S N ST I+ T+ S+P T+ V+ + + ++ S
Sbjct: 2572 TALNSSTPITSSSVLN------SSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTS 2625

Query: 77 T 75
T
Sbjct: 2626 T 2626



Score = 29.6 bits (65), Expect = 9.0
Identities = 27/107 (25%), Positives = 45/107 (42%)
Frame = -3

Query: 437 TVTLSSAEFIQPRV*TLMQPLRGRQISCQALQVDASVRQNTTL*RPNSSIVRVAKTSTSM 258
TV SS V P+ + + + +S NT+ +SS++ + TS
Sbjct: 2812 TVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSS 2871

Query: 257 KALNEARRYLASFATNLMFRKLPSTHISLFTLSG*SSPSTARAVLTA 117
ALN + +S N ST I+ T+ S+P T+ +VL +
Sbjct: 2872 TALNTSTSITSSSVLN------SSTPITSSTVVNTSTPITSSSVLNS 2912


tr_hit_id A9TN97
Definition tr|A9TN97|A9TN97_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 74
Score (bit) 107.0
E-value 3.0e-22
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957899|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_J09, 5'
(523 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TN97|A9TN97_PHYPA Predicted protein OS=Physcomitrella paten... 107 3e-22
tr|A9P2A4|A9P2A4_PICSI Putative uncharacterized protein OS=Picea... 94 3e-18
tr|Q8GWD7|Q8GWD7_ARATH Putative uncharacterized protein (At5g530... 86 1e-15
tr|B7FN15|B7FN15_MEDTR Putative uncharacterized protein OS=Medic... 86 1e-15
tr|A7QF20|A7QF20_VITVI Chromosome chr16 scaffold_86, whole genom... 86 1e-15
tr|A3BV77|A3BV77_ORYSJ Putative uncharacterized protein OS=Oryza... 85 3e-15
tr|A3A5Y4|A3A5Y4_ORYSJ Putative uncharacterized protein OS=Oryza... 85 3e-15
tr|Q6K2Z6|Q6K2Z6_ORYSJ Os02g0305800 protein OS=Oryza sativa subs... 84 3e-15
tr|B7FFG5|B7FFG5_MEDTR Putative uncharacterized protein OS=Medic... 84 3e-15
tr|A2X3U8|A2X3U8_ORYSI Putative uncharacterized protein OS=Oryza... 84 3e-15
tr|B6TKU4|B6TKU4_MAIZE Putative uncharacterized protein OS=Zea m... 82 2e-14
tr|Q0J451|Q0J451_ORYSJ Os08g0534400 protein (Fragment) OS=Oryza ... 68 3e-10
tr|B7P4A6|B7P4A6_IXOSC L antigen, putative OS=Ixodes scapularis ... 56 1e-06
tr|A8NTK9|A8NTK9_COPC7 Predicted protein OS=Coprinopsis cinerea ... 55 2e-06
tr|A7RKC2|A7RKC2_NEMVE Predicted protein OS=Nematostella vectens... 53 8e-06
tr|Q6K2Z0|Q6K2Z0_ORYSJ Putative uncharacterized protein P0543C11... 49 1e-04
tr|B0D9T1|B0D9T1_LACBS Predicted protein OS=Laccaria bicolor (st... 49 2e-04
tr|A8Q7F7|A8Q7F7_BRUMA 1110049G11Rik protein, putative OS=Brugia... 45 0.002
tr|Q55KT6|Q55KT6_CRYNE Putative uncharacterized protein OS=Crypt... 43 0.008
tr|B3S784|B3S784_TRIAD Putative uncharacterized protein (Fragmen... 42 0.024
tr|B6K1D7|B6K1D7_SCHJP Putative uncharacterized protein OS=Schiz... 40 0.071
tr|B6AAU8|B6AAU8_9CRYT Putative uncharacterized protein OS=Crypt... 39 0.16
tr|Q21019|Q21019_CAEEL Protein F59A2.5, partially confirmed by t... 39 0.21
tr|A0CEV0|A0CEV0_PARTE Chromosome undetermined scaffold_173, who... 38 0.35
tr|A0BD27|A0BD27_PARTE Chromosome undetermined scaffold_10, whol... 37 0.60
tr|B4N0L9|B4N0L9_DROWI GK24605 OS=Drosophila willistoni GN=GK246... 35 3.0
tr|A3LZP9|A3LZP9_PICST Predicted protein OS=Pichia stipitis GN=P... 34 5.1
tr|A8PVC8|A8PVC8_MALGO Putative uncharacterized protein OS=Malas... 33 6.5
tr|Q9YVP6|Q9YVP6_MSEPV ORF MSV196 ALI motif gene family protein ... 33 6.6
tr|Q5DGD6|Q5DGD6_SCHJA Putative uncharacterized protein OS=Schis... 33 6.6

>tr|A9TN97|A9TN97_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_148062 PE=4 SV=1
Length = 94

Score = 107 bits (268), Expect = 3e-22
Identities = 53/74 (71%), Positives = 65/74 (87%)
Frame = +1

Query: 82 LNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARYLRASFSAFM 261
+N++YPSE +AN VKTALAVD ELQPDKV+REM V+G L++ F A EAR+LRASFSAFM
Sbjct: 10 MNVDYPSESLANIVKTALAVDPELQPDKVQREMSVQGARLSVTFTALEARFLRASFSAFM 69

Query: 262 DVLVLATRTIEEFG 303
D+LVLAT+TIE+FG
Sbjct: 70 DLLVLATKTIEQFG 83


>tr|A9P2A4|A9P2A4_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=4 SV=1
Length = 104

Score = 94.4 bits (233), Expect = 3e-18
Identities = 48/75 (64%), Positives = 59/75 (78%)
Frame = +1

Query: 79 ELNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARYLRASFSAF 258
EL +EY SE A+ V T L+VD ELQPDKVKR + + G L ++F A EAR+LRASFSAF
Sbjct: 28 ELQVEYASEENASMVYTTLSVDKELQPDKVKRNLVLNGRQLLVQFAAVEARFLRASFSAF 87

Query: 259 MDVLVLATRTIEEFG 303
+D+LVLATRTIE+FG
Sbjct: 88 VDILVLATRTIEQFG 102


>tr|Q8GWD7|Q8GWD7_ARATH Putative uncharacterized protein (At5g53043)
OS=Arabidopsis thaliana GN=At5g53045 PE=4 SV=1
Length = 96

Score = 85.9 bits (211), Expect = 1e-15
Identities = 46/75 (61%), Positives = 56/75 (74%)
Frame = +1

Query: 82 LNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARYLRASFSAFM 261
L++ + SE A T+LAVD ELQPDKV+R M V N L++ F A EAR LRASFSAF+
Sbjct: 21 LDVSFESEEHALIAYTSLAVDKELQPDKVRRVMSVSNNKLSVHFEAIEARLLRASFSAFV 80

Query: 262 DVLVLATRTIEEFGR 306
DVL LATRTI+EFG+
Sbjct: 81 DVLTLATRTIQEFGQ 95


>tr|B7FN15|B7FN15_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=4 SV=1
Length = 93

Score = 85.9 bits (211), Expect = 1e-15
Identities = 45/76 (59%), Positives = 58/76 (76%)
Frame = +1

Query: 79 ELNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARYLRASFSAF 258
+L +++ S+ A+ V ALAVD ELQP+KVKR M V L++ F A EAR+LRASFSAF
Sbjct: 14 DLEVDFGSQENASIVYAALAVDKELQPNKVKRIMAVSDGKLSVHFEAIEARFLRASFSAF 73

Query: 259 MDVLVLATRTIEEFGR 306
+DVL LAT+TIEEFG+
Sbjct: 74 VDVLTLATKTIEEFGQ 89


>tr|A7QF20|A7QF20_VITVI Chromosome chr16 scaffold_86, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00037243001
PE=4 SV=1
Length = 122

Score = 85.5 bits (210), Expect = 1e-15
Identities = 43/76 (56%), Positives = 57/76 (75%)
Frame = +1

Query: 79 ELNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARYLRASFSAF 258
+L ++Y S+ +A+ V +AL VD EL PDKVKR+M V L++ F EAR+LRASFSAF
Sbjct: 35 DLEVDYESQEIASIVYSALDVDKELHPDKVKRQMSVSDGKLSVHFEGVEARFLRASFSAF 94

Query: 259 MDVLVLATRTIEEFGR 306
+DVL LAT+T EEFG+
Sbjct: 95 VDVLTLATKTAEEFGK 110


>tr|A3BV77|A3BV77_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_026949 PE=4 SV=1
Length = 459

Score = 84.7 bits (208), Expect = 3e-15
Identities = 46/83 (55%), Positives = 57/83 (68%)
Frame = +1

Query: 55 VQLDSLKVELNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARY 234
VQ + + I+Y SE A+ V LAVD ELQPDKVKREM V G L + F A EAR+
Sbjct: 368 VQPREQQSDFEIDYGSEERASIVYKTLAVDKELQPDKVKREMSVSGGKLVVHFEAVEARF 427

Query: 235 LRASFSAFMDVLVLATRTIEEFG 303
LRASFSAF+D+ VL T+ +EE+G
Sbjct: 428 LRASFSAFVDLTVLVTKLVEEYG 450


>tr|A3A5Y4|A3A5Y4_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_006206 PE=4 SV=1
Length = 347

Score = 84.7 bits (208), Expect = 3e-15
Identities = 46/83 (55%), Positives = 57/83 (68%)
Frame = +1

Query: 55 VQLDSLKVELNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARY 234
VQ + + I+Y SE A+ V LAVD ELQPDKVKREM V G L + F A EAR+
Sbjct: 256 VQPRERQSDFEIDYGSEERASIVYKTLAVDKELQPDKVKREMSVSGGKLVVHFEAVEARF 315

Query: 235 LRASFSAFMDVLVLATRTIEEFG 303
LRASFSAF+D+ VL T+ +EE+G
Sbjct: 316 LRASFSAFVDLTVLVTKLVEEYG 338


>tr|Q6K2Z6|Q6K2Z6_ORYSJ Os02g0305800 protein OS=Oryza sativa subsp.
japonica GN=P0543C11.13 PE=4 SV=1
Length = 103

Score = 84.3 bits (207), Expect = 3e-15
Identities = 44/75 (58%), Positives = 54/75 (72%)
Frame = +1

Query: 79 ELNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARYLRASFSAF 258
+ I+Y SE A+ V LAVD ELQPDKVKREM V G L + F A EAR+LRASFSAF
Sbjct: 20 DFEIDYGSEERASIVYKTLAVDKELQPDKVKREMSVSGGKLVVHFEAVEARFLRASFSAF 79

Query: 259 MDVLVLATRTIEEFG 303
+D+ VL T+ +EE+G
Sbjct: 80 VDLTVLVTKLVEEYG 94


>tr|B7FFG5|B7FFG5_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=4 SV=1
Length = 93

Score = 84.3 bits (207), Expect = 3e-15
Identities = 45/76 (59%), Positives = 57/76 (75%)
Frame = +1

Query: 79 ELNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARYLRASFSAF 258
+L + + S+ A+ V ALAVD ELQP+KVKR M V L++ F A EAR+LRASFSAF
Sbjct: 14 DLEVGFGSQENASIVYAALAVDKELQPNKVKRIMAVSDGKLSVHFEAIEARFLRASFSAF 73

Query: 259 MDVLVLATRTIEEFGR 306
+DVL LAT+TIEEFG+
Sbjct: 74 VDVLTLATKTIEEFGQ 89


>tr|A2X3U8|A2X3U8_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_06886 PE=4 SV=1
Length = 103

Score = 84.3 bits (207), Expect = 3e-15
Identities = 44/75 (58%), Positives = 54/75 (72%)
Frame = +1

Query: 79 ELNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARYLRASFSAF 258
+ I+Y SE A+ V LAVD ELQPDKVKREM V G L + F A EAR+LRASFSAF
Sbjct: 20 DFEIDYGSEERASIVYKTLAVDKELQPDKVKREMSVSGGKLVVHFEAVEARFLRASFSAF 79

Query: 259 MDVLVLATRTIEEFG 303
+D+ VL T+ +EE+G
Sbjct: 80 VDLTVLVTKLVEEYG 94