DK957899 |
Clone id |
TST39A01NGRL0029_J09 |
Library |
TST39 |
Length |
523 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_J09. 5' end sequence. |
Accession |
DK957899 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CCCAAGGTCACGAGGCTCACAACACCTCTCGATATCACGACGGAGATCGAGGAAGTGCAA CTAGACTCCCTCAAAGTGGAATTGAACATCGAGTATCCTTCTGAGTACATGGCAAATGCC GTTAAAACAGCCCTTGCAGTTGATGGAGAGCTTCAGCCTGACAAAGTGAAGAGGGAGATG TGTGTAGAAGGCAACTTCCTGAACATTAAATTTGTGGCAAATGAAGCAAGGTATCTGCGA GCTTCATTTAGTGCTTTCATGGATGTGCTTGTTTTGGCAACTCGCACAATTGAGGAGTTT GGTCGTTAAAGCGTGGTATTCTGCCTCACAGAGGCATCAACCTGGAGTGCTTGACAAGAT ATCTGTCTCCCTCTTAGTGGCTGCATCAAGGTTTAAACACGTGGCTGGATAAACTCTGCG CTCGAAAGTGTAACAGTATCATATGCTGCTCTTTCTACTCAAGAAAGATGAGAAAGAAAA AGATTGTGCTGATGGGGAGGCTGAGTTGCTGCTTTATATTGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q14657 |
Definition |
sp|Q14657|LAGE3_HUMAN L antigen family member 3 OS=Homo sapiens |
Align length |
74 |
Score (bit) |
45.4 |
E-value |
0.0002 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TN97 |
Definition |
tr|A9TN97|A9TN97_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
74 |
Score (bit) |
107.0 |
E-value |
3.0e-22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957899|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0029_J09, 5' (523 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TN97|A9TN97_PHYPA Predicted protein OS=Physcomitrella paten... 107 3e-22 tr|A9P2A4|A9P2A4_PICSI Putative uncharacterized protein OS=Picea... 94 3e-18 tr|Q8GWD7|Q8GWD7_ARATH Putative uncharacterized protein (At5g530... 86 1e-15 tr|B7FN15|B7FN15_MEDTR Putative uncharacterized protein OS=Medic... 86 1e-15 tr|A7QF20|A7QF20_VITVI Chromosome chr16 scaffold_86, whole genom... 86 1e-15 tr|A3BV77|A3BV77_ORYSJ Putative uncharacterized protein OS=Oryza... 85 3e-15 tr|A3A5Y4|A3A5Y4_ORYSJ Putative uncharacterized protein OS=Oryza... 85 3e-15 tr|Q6K2Z6|Q6K2Z6_ORYSJ Os02g0305800 protein OS=Oryza sativa subs... 84 3e-15 tr|B7FFG5|B7FFG5_MEDTR Putative uncharacterized protein OS=Medic... 84 3e-15 tr|A2X3U8|A2X3U8_ORYSI Putative uncharacterized protein OS=Oryza... 84 3e-15 tr|B6TKU4|B6TKU4_MAIZE Putative uncharacterized protein OS=Zea m... 82 2e-14 tr|Q0J451|Q0J451_ORYSJ Os08g0534400 protein (Fragment) OS=Oryza ... 68 3e-10 tr|B7P4A6|B7P4A6_IXOSC L antigen, putative OS=Ixodes scapularis ... 56 1e-06 tr|A8NTK9|A8NTK9_COPC7 Predicted protein OS=Coprinopsis cinerea ... 55 2e-06 tr|A7RKC2|A7RKC2_NEMVE Predicted protein OS=Nematostella vectens... 53 8e-06 tr|Q6K2Z0|Q6K2Z0_ORYSJ Putative uncharacterized protein P0543C11... 49 1e-04 tr|B0D9T1|B0D9T1_LACBS Predicted protein OS=Laccaria bicolor (st... 49 2e-04 tr|A8Q7F7|A8Q7F7_BRUMA 1110049G11Rik protein, putative OS=Brugia... 45 0.002 tr|Q55KT6|Q55KT6_CRYNE Putative uncharacterized protein OS=Crypt... 43 0.008 tr|B3S784|B3S784_TRIAD Putative uncharacterized protein (Fragmen... 42 0.024 tr|B6K1D7|B6K1D7_SCHJP Putative uncharacterized protein OS=Schiz... 40 0.071 tr|B6AAU8|B6AAU8_9CRYT Putative uncharacterized protein OS=Crypt... 39 0.16 tr|Q21019|Q21019_CAEEL Protein F59A2.5, partially confirmed by t... 39 0.21 tr|A0CEV0|A0CEV0_PARTE Chromosome undetermined scaffold_173, who... 38 0.35 tr|A0BD27|A0BD27_PARTE Chromosome undetermined scaffold_10, whol... 37 0.60 tr|B4N0L9|B4N0L9_DROWI GK24605 OS=Drosophila willistoni GN=GK246... 35 3.0 tr|A3LZP9|A3LZP9_PICST Predicted protein OS=Pichia stipitis GN=P... 34 5.1 tr|A8PVC8|A8PVC8_MALGO Putative uncharacterized protein OS=Malas... 33 6.5 tr|Q9YVP6|Q9YVP6_MSEPV ORF MSV196 ALI motif gene family protein ... 33 6.6 tr|Q5DGD6|Q5DGD6_SCHJA Putative uncharacterized protein OS=Schis... 33 6.6
>tr|A9TN97|A9TN97_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_148062 PE=4 SV=1 Length = 94
Score = 107 bits (268), Expect = 3e-22 Identities = 53/74 (71%), Positives = 65/74 (87%) Frame = +1
Query: 82 LNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARYLRASFSAFM 261 +N++YPSE +AN VKTALAVD ELQPDKV+REM V+G L++ F A EAR+LRASFSAFM Sbjct: 10 MNVDYPSESLANIVKTALAVDPELQPDKVQREMSVQGARLSVTFTALEARFLRASFSAFM 69
Query: 262 DVLVLATRTIEEFG 303 D+LVLAT+TIE+FG Sbjct: 70 DLLVLATKTIEQFG 83
>tr|A9P2A4|A9P2A4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 104
Score = 94.4 bits (233), Expect = 3e-18 Identities = 48/75 (64%), Positives = 59/75 (78%) Frame = +1
Query: 79 ELNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARYLRASFSAF 258 EL +EY SE A+ V T L+VD ELQPDKVKR + + G L ++F A EAR+LRASFSAF Sbjct: 28 ELQVEYASEENASMVYTTLSVDKELQPDKVKRNLVLNGRQLLVQFAAVEARFLRASFSAF 87
Query: 259 MDVLVLATRTIEEFG 303 +D+LVLATRTIE+FG Sbjct: 88 VDILVLATRTIEQFG 102
>tr|Q8GWD7|Q8GWD7_ARATH Putative uncharacterized protein (At5g53043) OS=Arabidopsis thaliana GN=At5g53045 PE=4 SV=1 Length = 96
Score = 85.9 bits (211), Expect = 1e-15 Identities = 46/75 (61%), Positives = 56/75 (74%) Frame = +1
Query: 82 LNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARYLRASFSAFM 261 L++ + SE A T+LAVD ELQPDKV+R M V N L++ F A EAR LRASFSAF+ Sbjct: 21 LDVSFESEEHALIAYTSLAVDKELQPDKVRRVMSVSNNKLSVHFEAIEARLLRASFSAFV 80
Query: 262 DVLVLATRTIEEFGR 306 DVL LATRTI+EFG+ Sbjct: 81 DVLTLATRTIQEFGQ 95
>tr|B7FN15|B7FN15_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1 Length = 93
Score = 85.9 bits (211), Expect = 1e-15 Identities = 45/76 (59%), Positives = 58/76 (76%) Frame = +1
Query: 79 ELNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARYLRASFSAF 258 +L +++ S+ A+ V ALAVD ELQP+KVKR M V L++ F A EAR+LRASFSAF Sbjct: 14 DLEVDFGSQENASIVYAALAVDKELQPNKVKRIMAVSDGKLSVHFEAIEARFLRASFSAF 73
Query: 259 MDVLVLATRTIEEFGR 306 +DVL LAT+TIEEFG+ Sbjct: 74 VDVLTLATKTIEEFGQ 89
>tr|A7QF20|A7QF20_VITVI Chromosome chr16 scaffold_86, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037243001 PE=4 SV=1 Length = 122
Score = 85.5 bits (210), Expect = 1e-15 Identities = 43/76 (56%), Positives = 57/76 (75%) Frame = +1
Query: 79 ELNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARYLRASFSAF 258 +L ++Y S+ +A+ V +AL VD EL PDKVKR+M V L++ F EAR+LRASFSAF Sbjct: 35 DLEVDYESQEIASIVYSALDVDKELHPDKVKRQMSVSDGKLSVHFEGVEARFLRASFSAF 94
Query: 259 MDVLVLATRTIEEFGR 306 +DVL LAT+T EEFG+ Sbjct: 95 VDVLTLATKTAEEFGK 110
>tr|A3BV77|A3BV77_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_026949 PE=4 SV=1 Length = 459
Score = 84.7 bits (208), Expect = 3e-15 Identities = 46/83 (55%), Positives = 57/83 (68%) Frame = +1
Query: 55 VQLDSLKVELNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARY 234 VQ + + I+Y SE A+ V LAVD ELQPDKVKREM V G L + F A EAR+ Sbjct: 368 VQPREQQSDFEIDYGSEERASIVYKTLAVDKELQPDKVKREMSVSGGKLVVHFEAVEARF 427
Query: 235 LRASFSAFMDVLVLATRTIEEFG 303 LRASFSAF+D+ VL T+ +EE+G Sbjct: 428 LRASFSAFVDLTVLVTKLVEEYG 450
>tr|A3A5Y4|A3A5Y4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_006206 PE=4 SV=1 Length = 347
Score = 84.7 bits (208), Expect = 3e-15 Identities = 46/83 (55%), Positives = 57/83 (68%) Frame = +1
Query: 55 VQLDSLKVELNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARY 234 VQ + + I+Y SE A+ V LAVD ELQPDKVKREM V G L + F A EAR+ Sbjct: 256 VQPRERQSDFEIDYGSEERASIVYKTLAVDKELQPDKVKREMSVSGGKLVVHFEAVEARF 315
Query: 235 LRASFSAFMDVLVLATRTIEEFG 303 LRASFSAF+D+ VL T+ +EE+G Sbjct: 316 LRASFSAFVDLTVLVTKLVEEYG 338
>tr|Q6K2Z6|Q6K2Z6_ORYSJ Os02g0305800 protein OS=Oryza sativa subsp. japonica GN=P0543C11.13 PE=4 SV=1 Length = 103
Score = 84.3 bits (207), Expect = 3e-15 Identities = 44/75 (58%), Positives = 54/75 (72%) Frame = +1
Query: 79 ELNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARYLRASFSAF 258 + I+Y SE A+ V LAVD ELQPDKVKREM V G L + F A EAR+LRASFSAF Sbjct: 20 DFEIDYGSEERASIVYKTLAVDKELQPDKVKREMSVSGGKLVVHFEAVEARFLRASFSAF 79
Query: 259 MDVLVLATRTIEEFG 303 +D+ VL T+ +EE+G Sbjct: 80 VDLTVLVTKLVEEYG 94
>tr|B7FFG5|B7FFG5_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1 Length = 93
Score = 84.3 bits (207), Expect = 3e-15 Identities = 45/76 (59%), Positives = 57/76 (75%) Frame = +1
Query: 79 ELNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARYLRASFSAF 258 +L + + S+ A+ V ALAVD ELQP+KVKR M V L++ F A EAR+LRASFSAF Sbjct: 14 DLEVGFGSQENASIVYAALAVDKELQPNKVKRIMAVSDGKLSVHFEAIEARFLRASFSAF 73
Query: 259 MDVLVLATRTIEEFGR 306 +DVL LAT+TIEEFG+ Sbjct: 74 VDVLTLATKTIEEFGQ 89
>tr|A2X3U8|A2X3U8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06886 PE=4 SV=1 Length = 103
Score = 84.3 bits (207), Expect = 3e-15 Identities = 44/75 (58%), Positives = 54/75 (72%) Frame = +1
Query: 79 ELNIEYPSEYMANAVKTALAVDGELQPDKVKREMCVEGNFLNIKFVANEARYLRASFSAF 258 + I+Y SE A+ V LAVD ELQPDKVKREM V G L + F A EAR+LRASFSAF Sbjct: 20 DFEIDYGSEERASIVYKTLAVDKELQPDKVKREMSVSGGKLVVHFEAVEARFLRASFSAF 79
Query: 259 MDVLVLATRTIEEFG 303 +D+ VL T+ +EE+G Sbjct: 80 VDLTVLVTKLVEEYG 94
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