DK957753 |
Clone id |
TST39A01NGRL0029_D04 |
Library |
TST39 |
Length |
647 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_D04. 5' end sequence. |
Accession |
DK957753 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GTTTGTTGTGGTGATCCTCCCCAATCCGAAGACCACCAGCGTGCGAGCTTCCCCGTGCGC AGTTTAGGCCTAACATGGGAAGTACATCAGCATCTTGCTCGCGTATGCCTCTCGCAAAAG GTTTGAGTGGTGCATCACGGAAGACTGTTTTATATAATTCTTTAAGAAGGAACCTATCTT CAAGGAAAAGTTTTGAATCCAATATCAGCCTGGAAGTTGTGCTTATTTCAGTGGAGAAAG CTATCATAGGGTGTACCTCTCATTGTTCAAAAACCTTGCAAATATTTGCCAAACTTAGGA AAGGGGGTAAATCAGGCAACAATGGAGATCATAGATCACGCTATGGGCGTCCCTTTTCCA ATGGCAATTCTGGCTTGCGCTCCCCTGTTCCTTTAGAGCAGCAGCCGGTGAATGAGTATC AAACTCTGGTAGACTCAGTGCTCTTTTCCTGGGCAGTCGGAGATCTTTGGCTATACACAT TGAAGTTATCGGCTGTTGGTGCTGTAGTTGCTCTCTTGTTAGGATGGCCAATCATGGCCA CCAGTGTGGACGCAGAGAAAGAACTTTTCAAATGTGGAACAGGAGCTCTTTGTGGGGGCC TTCTGGCAGTGACGTTAGCAGCATTGAGAATGTACCTCGGTTGGGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P48276 |
Definition |
sp|P48276|YCF36_CYAPA Uncharacterized protein ycf36 OS=Cyanophora paradoxa |
Align length |
31 |
Score (bit) |
42.0 |
E-value |
0.003 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NYZ6 |
Definition |
tr|A9NYZ6|A9NYZ6_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
120 |
Score (bit) |
90.9 |
E-value |
6.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957753|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0029_D04, 5' (647 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NYZ6|A9NYZ6_PICSI Putative uncharacterized protein OS=Picea... 91 6e-17 tr|A9TQ91|A9TQ91_PHYPA Predicted protein (Fragment) OS=Physcomit... 66 2e-09 tr|A9TRT6|A9TRT6_PHYPA Predicted protein (Fragment) OS=Physcomit... 66 2e-09 tr|A7P4M9|A7P4M9_VITVI Chromosome chr4 scaffold_6, whole genome ... 55 3e-06 tr|Q9LYI9|Q9LYI9_ARATH Putative uncharacterized protein F14F18_1... 54 1e-05 tr|Q75KB9|Q75KB9_ORYSJ Expressed protein (Putative uncharacteriz... 54 1e-05 tr|Q10J01|Q10J01_ORYSJ Os03g0439700 protein OS=Oryza sativa subs... 54 1e-05 tr|B6IDH6|B6IDH6_ARATH At5g11840 OS=Arabidopsis thaliana PE=2 SV=1 54 1e-05 tr|A5BUA8|A5BUA8_VITVI Putative uncharacterized protein (Chromos... 52 2e-05 tr|Q53WK2|Q53WK2_ORYSJ Os05g0539900 protein OS=Oryza sativa subs... 52 3e-05 tr|B7EMT6|B7EMT6_ORYSJ cDNA clone:J033075I05, full insert sequen... 52 3e-05 tr|B7FKL7|B7FKL7_MEDTR Putative uncharacterized protein OS=Medic... 50 1e-04 tr|Q10VW3|Q10VW3_TRIEI Putative uncharacterized protein OS=Trich... 49 3e-04 tr|B4VPY8|B4VPY8_9CYAN Putative uncharacterized protein OS=Micro... 49 3e-04 tr|B6U8L9|B6U8L9_MAIZE Putative uncharacterized protein OS=Zea m... 49 3e-04 tr|B0JP66|B0JP66_MICAN Putative uncharacterized protein ycf36 OS... 48 4e-04 tr|A2XIE1|A2XIE1_ORYSI Putative uncharacterized protein OS=Oryza... 48 6e-04 tr|A8YA14|A8YA14_MICAE Similar to Q4C615_CROWT Hypothetical prot... 47 8e-04 tr|A0YYX0|A0YYX0_9CYAN Putative uncharacterized protein OS=Lyngb... 45 0.003 tr|Q55866|Q55866_SYNY3 Ycf36 protein OS=Synechocystis sp. (strai... 44 0.006 tr|B7KCB3|B7KCB3_9CHRO Putative uncharacterized protein OS=Cyano... 44 0.006 tr|B0C130|B0C130_ACAM1 Putative uncharacterized protein OS=Acary... 44 0.008 tr|Q4C615|Q4C615_CROWT Putative uncharacterized protein OS=Croco... 44 0.008 tr|A3IPE7|A3IPE7_9CHRO Putative uncharacterized protein OS=Cyano... 44 0.011 tr|Q9FN15|Q9FN15_ARATH Gb|AAC18972.1 (Putative uncharacterized p... 43 0.014 tr|B1WTU3|B1WTU3_CYAA5 DUF1230-containing protein OS=Cyanothece ... 42 0.024 tr|A9RYR8|A9RYR8_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.024 tr|Q5N2D9|Q5N2D9_SYNP6 Putative uncharacterized protein ycf36 OS... 42 0.042 tr|Q31RX2|Q31RX2_SYNE7 Putative uncharacterized protein OS=Synec... 42 0.042 tr|B2ITK5|B2ITK5_NOSP7 Putative uncharacterized protein OS=Nosto... 41 0.071
>tr|A9NYZ6|A9NYZ6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 311
Score = 90.9 bits (224), Expect = 6e-17 Identities = 51/120 (42%), Positives = 61/120 (50%), Gaps = 1/120 (0%) Frame = +3
Query: 291 KLRKGGKSGNNGDHRSRYGRPFSNGN-SGLRSPVPLEQQPVNEYQTLVDSVLFSWAVGDL 467 K +K GKS N GD R PF+NG+ G PVP +QQPVNEYQ+L +S FSWA D+ Sbjct: 75 KAKKDGKSSNWGD---RTPPPFANGSPGGTDCPVPFDQQPVNEYQSLANSDFFSWANEDI 131
Query: 468 WLYTLKLSXXXXXXXXXXXWPIMATSVDAEKELFKXXXXXXXXXXXXXXXXXXRMYLGWA 647 W Y L+L WP+ SVD E EL K R+YLGWA Sbjct: 132 WKYGLRLGGIGTAFTVLIGWPVARVSVDPEHELLKCGIGALCGGLLVVTLAALRLYLGWA 191
>tr|A9TQ91|A9TQ91_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_47145 PE=4 SV=1 Length = 134
Score = 66.2 bits (160), Expect = 2e-09 Identities = 32/88 (36%), Positives = 47/88 (53%) Frame = +3
Query: 384 PVPLEQQPVNEYQTLVDSVLFSWAVGDLWLYTLKLSXXXXXXXXXXXWPIMATSVDAEKE 563 PVP EQQPVNEYQ L ++ LF+WA D+ +T++LS +P+ + S++A++E Sbjct: 4 PVPWEQQPVNEYQMLNETGLFAWATDDILSFTIRLSAVIAGISALVGYPVASLSINAQQE 63
Query: 564 LFKXXXXXXXXXXXXXXXXXXRMYLGWA 647 K R+YLGWA Sbjct: 64 FLKCVLGASCGGVIAATVVTLRLYLGWA 91
>tr|A9TRT6|A9TRT6_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_35267 PE=4 SV=1 Length = 152
Score = 65.9 bits (159), Expect = 2e-09 Identities = 33/91 (36%), Positives = 47/91 (51%) Frame = +3
Query: 375 LRSPVPLEQQPVNEYQTLVDSVLFSWAVGDLWLYTLKLSXXXXXXXXXXXWPIMATSVDA 554 + PVP EQQPVNEYQ L ++ LF+WA DL + ++++ +PI A S+DA Sbjct: 1 IECPVPWEQQPVNEYQMLNETGLFAWATDDLLSFGIRMTAVTVGISAFVGYPIAALSIDA 60
Query: 555 EKELFKXXXXXXXXXXXXXXXXXXRMYLGWA 647 ++E K R+YLGWA Sbjct: 61 KQEFLKCCMGASCGGMLAATVVTLRLYLGWA 91
>tr|A7P4M9|A7P4M9_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032213001 PE=4 SV=1 Length = 268
Score = 55.5 bits (132), Expect = 3e-06 Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 4/102 (3%) Frame = +3
Query: 354 FSNGNSG---LRSPVPLEQQPVNEYQTLVDSVLFSWAVGDLWLYTLKLSXXXXXXXXXXX 524 F+NG++ PVPL+QQP+NEYQTL S FSWA GD Y +L+ Sbjct: 54 FTNGSNTPPETECPVPLDQQPINEYQTLSTSFPFSWASGDFVEYCSRLAVTGVSFALFIG 113
Query: 525 WPI-MATSVDAEKELFKXXXXXXXXXXXXXXXXXXRMYLGWA 647 P+ +V + E K RMYLGWA Sbjct: 114 LPVAWFGAVGPDSEPLKRILGAVSSGIFVVTLAVVRMYLGWA 155
>tr|Q9LYI9|Q9LYI9_ARATH Putative uncharacterized protein F14F18_10 OS=Arabidopsis thaliana GN=F14F18_10 PE=4 SV=1 Length = 255
Score = 53.5 bits (127), Expect = 1e-05 Identities = 34/89 (38%), Positives = 40/89 (44%), Gaps = 1/89 (1%) Frame = +3
Query: 384 PVPLEQQPVNEYQTLVDSVLFSWAVGDLWLYTLKLSXXXXXXXXXXXWPI-MATSVDAEK 560 PVP EQQP+NEYQ+L S FSWA GDL Y+ +L P+ S+ E Sbjct: 62 PVPPEQQPINEYQSLSTSFPFSWASGDLIEYSTRLFLTGASFAFFVGLPVSWFGSIGPEY 121
Query: 561 ELFKXXXXXXXXXXXXXXXXXXRMYLGWA 647 E K RMYLGWA Sbjct: 122 EPVKRILAASSSGIFVVTLAVVRMYLGWA 150
>tr|Q75KB9|Q75KB9_ORYSJ Expressed protein (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=OSJNBa0054H04.30 PE=4 SV=1 Length = 262
Score = 53.5 bits (127), Expect = 1e-05 Identities = 34/105 (32%), Positives = 44/105 (41%) Frame = +3
Query: 333 RSRYGRPFSNGNSGLRSPVPLEQQPVNEYQTLVDSVLFSWAVGDLWLYTLKLSXXXXXXX 512 RS + + + GL VP EQ+PVNEY L DSVL+SWA + L+L Sbjct: 11 RSGFAGGVPSWDPGLEIQVPFEQRPVNEYSALKDSVLYSWAELSPGSFFLRLGSLWLITF 70
Query: 513 XXXXWPIMATSVDAEKELFKXXXXXXXXXXXXXXXXXXRMYLGWA 647 PI A S K+ K R+YLGW+ Sbjct: 71 TVLAAPIAAASFSPGKDPLKFVLAAGIGTLLLVSLVVLRIYLGWS 115
>tr|Q10J01|Q10J01_ORYSJ Os03g0439700 protein OS=Oryza sativa subsp. japonica GN=Os03g0439700 PE=4 SV=1 Length = 312
Score = 53.5 bits (127), Expect = 1e-05 Identities = 34/105 (32%), Positives = 44/105 (41%) Frame = +3
Query: 333 RSRYGRPFSNGNSGLRSPVPLEQQPVNEYQTLVDSVLFSWAVGDLWLYTLKLSXXXXXXX 512 RS + + + GL VP EQ+PVNEY L DSVL+SWA + L+L Sbjct: 61 RSGFAGGVPSWDPGLEIQVPFEQRPVNEYSALKDSVLYSWAELSPGSFFLRLGSLWLITF 120
Query: 513 XXXXWPIMATSVDAEKELFKXXXXXXXXXXXXXXXXXXRMYLGWA 647 PI A S K+ K R+YLGW+ Sbjct: 121 TVLAAPIAAASFSPGKDPLKFVLAAGIGTLLLVSLVVLRIYLGWS 165
>tr|B6IDH6|B6IDH6_ARATH At5g11840 OS=Arabidopsis thaliana PE=2 SV=1 Length = 265
Score = 53.5 bits (127), Expect = 1e-05 Identities = 34/89 (38%), Positives = 40/89 (44%), Gaps = 1/89 (1%) Frame = +3
Query: 384 PVPLEQQPVNEYQTLVDSVLFSWAVGDLWLYTLKLSXXXXXXXXXXXWPI-MATSVDAEK 560 PVP EQQP+NEYQ+L S FSWA GDL Y+ +L P+ S+ E Sbjct: 62 PVPPEQQPINEYQSLSTSFPFSWASGDLIEYSTRLFLTGASFAFFVGLPVSWFGSIGPEY 121
Query: 561 ELFKXXXXXXXXXXXXXXXXXXRMYLGWA 647 E K RMYLGWA Sbjct: 122 EPVKRILAASSSGIFVVTLAVVRMYLGWA 150
>tr|A5BUA8|A5BUA8_VITVI Putative uncharacterized protein (Chromosome chr7 scaffold_20, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00019630001 PE=4 SV=1 Length = 309
Score = 52.4 bits (124), Expect = 2e-05 Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 3/143 (2%) Frame = +3
Query: 228 SVEKAIIGCTSHCSKTLQIFAKLRKGG---KSGNNGDHRSRYGRPFSNGNSGLRSPVPLE 398 SV + IG ++ S T+Q + K RK G ++ + G P + + GL VP E Sbjct: 13 SVRQVTIGSSTFSSWTIQ-YHKGRKLGISIRALKDETDGGTSGIPGGSWDPGLEIEVPFE 71
Query: 399 QQPVNEYQTLVDSVLFSWAVGDLWLYTLKLSXXXXXXXXXXXWPIMATSVDAEKELFKXX 578 Q+PVNEY +L D L+SW + ++L PI A S + +E + Sbjct: 72 QRPVNEYSSLKDGPLYSWGELSPGSFFIRLGGLWLVAFTVLGVPIAAASFNPSREPLRFV 131
Query: 579 XXXXXXXXXXXXXXXXRMYLGWA 647 R+YLGW+ Sbjct: 132 LAAGTGTLFLVSLIVLRIYLGWS 154
>tr|Q53WK2|Q53WK2_ORYSJ Os05g0539900 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0052K01.20 PE=4 SV=1 Length = 176
Score = 52.0 bits (123), Expect = 3e-05 Identities = 37/121 (30%), Positives = 49/121 (40%), Gaps = 6/121 (4%) Frame = +3
Query: 303 GGKSGNNGDHRSRYGRPFSNGNSGLRS----PVPLEQQPVNEYQTLVDSVLFSWAVGDLW 470 G + G R R+ P S S + PVP EQ PVNEY++L S+ FSWA GDL Sbjct: 29 GSRGRRRGRGRRRFAVPPSRNGSSSQGTEWCPVPPEQLPVNEYESLAASLPFSWAAGDLT 88
Query: 471 LYTLKLSXXXXXXXXXXXWPIMATS--VDAEKELFKXXXXXXXXXXXXXXXXXXRMYLGW 644 +Y +L+ P+ + A + RMYLGW Sbjct: 89 VYCSRLALTGAAFALFVGLPVASFGGRGGAGGDAVHLALGATGSGILAVTLAVVRMYLGW 148
Query: 645 A 647 A Sbjct: 149 A 149
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