DK957753
Clone id TST39A01NGRL0029_D04
Library
Length 647
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_D04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GTTTGTTGTGGTGATCCTCCCCAATCCGAAGACCACCAGCGTGCGAGCTTCCCCGTGCGC
AGTTTAGGCCTAACATGGGAAGTACATCAGCATCTTGCTCGCGTATGCCTCTCGCAAAAG
GTTTGAGTGGTGCATCACGGAAGACTGTTTTATATAATTCTTTAAGAAGGAACCTATCTT
CAAGGAAAAGTTTTGAATCCAATATCAGCCTGGAAGTTGTGCTTATTTCAGTGGAGAAAG
CTATCATAGGGTGTACCTCTCATTGTTCAAAAACCTTGCAAATATTTGCCAAACTTAGGA
AAGGGGGTAAATCAGGCAACAATGGAGATCATAGATCACGCTATGGGCGTCCCTTTTCCA
ATGGCAATTCTGGCTTGCGCTCCCCTGTTCCTTTAGAGCAGCAGCCGGTGAATGAGTATC
AAACTCTGGTAGACTCAGTGCTCTTTTCCTGGGCAGTCGGAGATCTTTGGCTATACACAT
TGAAGTTATCGGCTGTTGGTGCTGTAGTTGCTCTCTTGTTAGGATGGCCAATCATGGCCA
CCAGTGTGGACGCAGAGAAAGAACTTTTCAAATGTGGAACAGGAGCTCTTTGTGGGGGCC
TTCTGGCAGTGACGTTAGCAGCATTGAGAATGTACCTCGGTTGGGCA
■■Homology search results ■■ -
sp_hit_id P48276
Definition sp|P48276|YCF36_CYAPA Uncharacterized protein ycf36 OS=Cyanophora paradoxa
Align length 31
Score (bit) 42.0
E-value 0.003
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957753|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_D04, 5'
(647 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P48276|YCF36_CYAPA Uncharacterized protein ycf36 OS=Cyanophor... 42 0.003
sp|P51273|YCF36_PORPU Uncharacterized protein ycf36 OS=Porphyra ... 41 0.006
sp|Q1XDL3|YCF36_PORYE Uncharacterized protein ycf36 OS=Porphyra ... 36 0.15
sp|O78501|YCF36_GUITH Uncharacterized protein ycf36 OS=Guillardi... 32 3.7
sp|Q940Y5|PIN7_ARATH Auxin efflux carrier component 7 OS=Arabido... 31 4.9
sp|Q5HZA1|PHR4A_XENLA Phosphatase and actin regulator 4-A OS=Xen... 30 8.3
sp|Q2YXC5|MURI_STAAB Glutamate racemase OS=Staphylococcus aureus... 30 8.3

>sp|P48276|YCF36_CYAPA Uncharacterized protein ycf36 OS=Cyanophora
paradoxa GN=ycf36 PE=3 SV=1
Length = 159

Score = 42.0 bits (97), Expect = 0.003
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3

Query: 384 PVPLEQQPVNEYQTLVDSVLFSWAVGDLWLY 476
P+P EQQP+NEYQ L +SVLF+W L +Y
Sbjct: 6 PIPTEQQPLNEYQILNNSVLFNWPSQKLKIY 36


>sp|P51273|YCF36_PORPU Uncharacterized protein ycf36 OS=Porphyra
purpurea GN=ycf36 PE=3 SV=1
Length = 165

Score = 40.8 bits (94), Expect = 0.006
Identities = 26/88 (29%), Positives = 35/88 (39%)
Frame = +3

Query: 384 PVPLEQQPVNEYQTLVDSVLFSWAVGDLWLYTLKLSXXXXXXXXXXXWPIMATSVDAEKE 563
PVPLEQQPVNEY +L +S F W Y K++ P++ + K
Sbjct: 9 PVPLEQQPVNEYNSLKNSWFFCWPTLSSHSYNKKITITLIATCFLVS-PVLLSIFPIAKL 67

Query: 564 LFKXXXXXXXXXXXXXXXXXXRMYLGWA 647
K R+YLGW+
Sbjct: 68 PLKFFFSEFIISSLITCFILIRLYLGWS 95


>sp|Q1XDL3|YCF36_PORYE Uncharacterized protein ycf36 OS=Porphyra
yezoensis GN=ycf36 PE=3 SV=1
Length = 165

Score = 36.2 bits (82), Expect = 0.15
Identities = 25/88 (28%), Positives = 34/88 (38%)
Frame = +3

Query: 384 PVPLEQQPVNEYQTLVDSVLFSWAVGDLWLYTLKLSXXXXXXXXXXXWPIMATSVDAEKE 563
PVP EQQPV+EY +L +S F W Y K++ PI+ + K
Sbjct: 9 PVPKEQQPVHEYTSLKNSWFFCWPTLSRRSYNKKITIALLLNCLLVS-PILLSIFPITKL 67

Query: 564 LFKXXXXXXXXXXXXXXXXXXRMYLGWA 647
K R+YLGW+
Sbjct: 68 PLKFFFSEFITSSLMTGFILIRLYLGWS 95


>sp|O78501|YCF36_GUITH Uncharacterized protein ycf36 OS=Guillardia
theta GN=ycf36 PE=3 SV=1
Length = 155

Score = 31.6 bits (70), Expect = 3.7
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3

Query: 375 LRSPVPLEQQPVNEYQTLVDSVLFSWA--VGDLW 470
+ PVP Q P+NEY L + FSWA +G L+
Sbjct: 1 MNCPVPENQLPINEYNKLTSAWDFSWACKIGKLY 34


>sp|Q940Y5|PIN7_ARATH Auxin efflux carrier component 7
OS=Arabidopsis thaliana GN=PIN7 PE=2 SV=2
Length = 619

Score = 31.2 bits (69), Expect = 4.9
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -2

Query: 565 SSFSASTLVAMIGHPNKRATTAPTADNFNVYSQRSPTAQEKSTEST 428
S+F+ S +M+G P R + AD ++V S R PT + + E +
Sbjct: 246 SNFNHSDFYSMMGFPGGRLSNFGPADMYSVQSSRGPTPRPSNFEES 291


>sp|Q5HZA1|PHR4A_XENLA Phosphatase and actin regulator 4-A
OS=Xenopus laevis GN=phactr4-A PE=2 SV=1
Length = 694

Score = 30.4 bits (67), Expect = 8.3
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = -2

Query: 643 QPRYILNAANVTARRPPQRAPVPHLKSSFSASTLVAMIGHPNKRATTAPTADNFNVYSQR 464
QP ++ A+V +R + APV + FS L+ P KR + T+ +Q
Sbjct: 199 QPHHVSEVASVVSRPTSEVAPVQKVSRDFSKQPLL-----PPKRPLSISTS-----VTQE 248

Query: 463 SPTAQEKSTESTRV 422
S A +KS S R+
Sbjct: 249 SAVAGQKSDSSNRL 262


>sp|Q2YXC5|MURI_STAAB Glutamate racemase OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=murI PE=3 SV=1
Length = 266

Score = 30.4 bits (67), Expect = 8.3
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1

Query: 277 CKYLPNLGKGVNQATMEIIDHAMGVPFPMAILAC 378
C Y P G+ V Q T+EI MG M ++AC
Sbjct: 39 CPYGPRPGEQVKQYTVEIARKLMGFDIKMLVIAC 72


tr_hit_id A9NYZ6
Definition tr|A9NYZ6|A9NYZ6_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 120
Score (bit) 90.9
E-value 6.0e-17
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957753|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_D04, 5'
(647 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NYZ6|A9NYZ6_PICSI Putative uncharacterized protein OS=Picea... 91 6e-17
tr|A9TQ91|A9TQ91_PHYPA Predicted protein (Fragment) OS=Physcomit... 66 2e-09
tr|A9TRT6|A9TRT6_PHYPA Predicted protein (Fragment) OS=Physcomit... 66 2e-09
tr|A7P4M9|A7P4M9_VITVI Chromosome chr4 scaffold_6, whole genome ... 55 3e-06
tr|Q9LYI9|Q9LYI9_ARATH Putative uncharacterized protein F14F18_1... 54 1e-05
tr|Q75KB9|Q75KB9_ORYSJ Expressed protein (Putative uncharacteriz... 54 1e-05
tr|Q10J01|Q10J01_ORYSJ Os03g0439700 protein OS=Oryza sativa subs... 54 1e-05
tr|B6IDH6|B6IDH6_ARATH At5g11840 OS=Arabidopsis thaliana PE=2 SV=1 54 1e-05
tr|A5BUA8|A5BUA8_VITVI Putative uncharacterized protein (Chromos... 52 2e-05
tr|Q53WK2|Q53WK2_ORYSJ Os05g0539900 protein OS=Oryza sativa subs... 52 3e-05
tr|B7EMT6|B7EMT6_ORYSJ cDNA clone:J033075I05, full insert sequen... 52 3e-05
tr|B7FKL7|B7FKL7_MEDTR Putative uncharacterized protein OS=Medic... 50 1e-04
tr|Q10VW3|Q10VW3_TRIEI Putative uncharacterized protein OS=Trich... 49 3e-04
tr|B4VPY8|B4VPY8_9CYAN Putative uncharacterized protein OS=Micro... 49 3e-04
tr|B6U8L9|B6U8L9_MAIZE Putative uncharacterized protein OS=Zea m... 49 3e-04
tr|B0JP66|B0JP66_MICAN Putative uncharacterized protein ycf36 OS... 48 4e-04
tr|A2XIE1|A2XIE1_ORYSI Putative uncharacterized protein OS=Oryza... 48 6e-04
tr|A8YA14|A8YA14_MICAE Similar to Q4C615_CROWT Hypothetical prot... 47 8e-04
tr|A0YYX0|A0YYX0_9CYAN Putative uncharacterized protein OS=Lyngb... 45 0.003
tr|Q55866|Q55866_SYNY3 Ycf36 protein OS=Synechocystis sp. (strai... 44 0.006
tr|B7KCB3|B7KCB3_9CHRO Putative uncharacterized protein OS=Cyano... 44 0.006
tr|B0C130|B0C130_ACAM1 Putative uncharacterized protein OS=Acary... 44 0.008
tr|Q4C615|Q4C615_CROWT Putative uncharacterized protein OS=Croco... 44 0.008
tr|A3IPE7|A3IPE7_9CHRO Putative uncharacterized protein OS=Cyano... 44 0.011
tr|Q9FN15|Q9FN15_ARATH Gb|AAC18972.1 (Putative uncharacterized p... 43 0.014
tr|B1WTU3|B1WTU3_CYAA5 DUF1230-containing protein OS=Cyanothece ... 42 0.024
tr|A9RYR8|A9RYR8_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.024
tr|Q5N2D9|Q5N2D9_SYNP6 Putative uncharacterized protein ycf36 OS... 42 0.042
tr|Q31RX2|Q31RX2_SYNE7 Putative uncharacterized protein OS=Synec... 42 0.042
tr|B2ITK5|B2ITK5_NOSP7 Putative uncharacterized protein OS=Nosto... 41 0.071

>tr|A9NYZ6|A9NYZ6_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 311

Score = 90.9 bits (224), Expect = 6e-17
Identities = 51/120 (42%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Frame = +3

Query: 291 KLRKGGKSGNNGDHRSRYGRPFSNGN-SGLRSPVPLEQQPVNEYQTLVDSVLFSWAVGDL 467
K +K GKS N GD R PF+NG+ G PVP +QQPVNEYQ+L +S FSWA D+
Sbjct: 75 KAKKDGKSSNWGD---RTPPPFANGSPGGTDCPVPFDQQPVNEYQSLANSDFFSWANEDI 131

Query: 468 WLYTLKLSXXXXXXXXXXXWPIMATSVDAEKELFKXXXXXXXXXXXXXXXXXXRMYLGWA 647
W Y L+L WP+ SVD E EL K R+YLGWA
Sbjct: 132 WKYGLRLGGIGTAFTVLIGWPVARVSVDPEHELLKCGIGALCGGLLVVTLAALRLYLGWA 191


>tr|A9TQ91|A9TQ91_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_47145 PE=4 SV=1
Length = 134

Score = 66.2 bits (160), Expect = 2e-09
Identities = 32/88 (36%), Positives = 47/88 (53%)
Frame = +3

Query: 384 PVPLEQQPVNEYQTLVDSVLFSWAVGDLWLYTLKLSXXXXXXXXXXXWPIMATSVDAEKE 563
PVP EQQPVNEYQ L ++ LF+WA D+ +T++LS +P+ + S++A++E
Sbjct: 4 PVPWEQQPVNEYQMLNETGLFAWATDDILSFTIRLSAVIAGISALVGYPVASLSINAQQE 63

Query: 564 LFKXXXXXXXXXXXXXXXXXXRMYLGWA 647
K R+YLGWA
Sbjct: 64 FLKCVLGASCGGVIAATVVTLRLYLGWA 91


>tr|A9TRT6|A9TRT6_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_35267 PE=4 SV=1
Length = 152

Score = 65.9 bits (159), Expect = 2e-09
Identities = 33/91 (36%), Positives = 47/91 (51%)
Frame = +3

Query: 375 LRSPVPLEQQPVNEYQTLVDSVLFSWAVGDLWLYTLKLSXXXXXXXXXXXWPIMATSVDA 554
+ PVP EQQPVNEYQ L ++ LF+WA DL + ++++ +PI A S+DA
Sbjct: 1 IECPVPWEQQPVNEYQMLNETGLFAWATDDLLSFGIRMTAVTVGISAFVGYPIAALSIDA 60

Query: 555 EKELFKXXXXXXXXXXXXXXXXXXRMYLGWA 647
++E K R+YLGWA
Sbjct: 61 KQEFLKCCMGASCGGMLAATVVTLRLYLGWA 91


>tr|A7P4M9|A7P4M9_VITVI Chromosome chr4 scaffold_6, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00032213001
PE=4 SV=1
Length = 268

Score = 55.5 bits (132), Expect = 3e-06
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Frame = +3

Query: 354 FSNGNSG---LRSPVPLEQQPVNEYQTLVDSVLFSWAVGDLWLYTLKLSXXXXXXXXXXX 524
F+NG++ PVPL+QQP+NEYQTL S FSWA GD Y +L+
Sbjct: 54 FTNGSNTPPETECPVPLDQQPINEYQTLSTSFPFSWASGDFVEYCSRLAVTGVSFALFIG 113

Query: 525 WPI-MATSVDAEKELFKXXXXXXXXXXXXXXXXXXRMYLGWA 647
P+ +V + E K RMYLGWA
Sbjct: 114 LPVAWFGAVGPDSEPLKRILGAVSSGIFVVTLAVVRMYLGWA 155


>tr|Q9LYI9|Q9LYI9_ARATH Putative uncharacterized protein F14F18_10
OS=Arabidopsis thaliana GN=F14F18_10 PE=4 SV=1
Length = 255

Score = 53.5 bits (127), Expect = 1e-05
Identities = 34/89 (38%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +3

Query: 384 PVPLEQQPVNEYQTLVDSVLFSWAVGDLWLYTLKLSXXXXXXXXXXXWPI-MATSVDAEK 560
PVP EQQP+NEYQ+L S FSWA GDL Y+ +L P+ S+ E
Sbjct: 62 PVPPEQQPINEYQSLSTSFPFSWASGDLIEYSTRLFLTGASFAFFVGLPVSWFGSIGPEY 121

Query: 561 ELFKXXXXXXXXXXXXXXXXXXRMYLGWA 647
E K RMYLGWA
Sbjct: 122 EPVKRILAASSSGIFVVTLAVVRMYLGWA 150


>tr|Q75KB9|Q75KB9_ORYSJ Expressed protein (Putative uncharacterized
protein) OS=Oryza sativa subsp. japonica
GN=OSJNBa0054H04.30 PE=4 SV=1
Length = 262

Score = 53.5 bits (127), Expect = 1e-05
Identities = 34/105 (32%), Positives = 44/105 (41%)
Frame = +3

Query: 333 RSRYGRPFSNGNSGLRSPVPLEQQPVNEYQTLVDSVLFSWAVGDLWLYTLKLSXXXXXXX 512
RS + + + GL VP EQ+PVNEY L DSVL+SWA + L+L
Sbjct: 11 RSGFAGGVPSWDPGLEIQVPFEQRPVNEYSALKDSVLYSWAELSPGSFFLRLGSLWLITF 70

Query: 513 XXXXWPIMATSVDAEKELFKXXXXXXXXXXXXXXXXXXRMYLGWA 647
PI A S K+ K R+YLGW+
Sbjct: 71 TVLAAPIAAASFSPGKDPLKFVLAAGIGTLLLVSLVVLRIYLGWS 115


>tr|Q10J01|Q10J01_ORYSJ Os03g0439700 protein OS=Oryza sativa subsp.
japonica GN=Os03g0439700 PE=4 SV=1
Length = 312

Score = 53.5 bits (127), Expect = 1e-05
Identities = 34/105 (32%), Positives = 44/105 (41%)
Frame = +3

Query: 333 RSRYGRPFSNGNSGLRSPVPLEQQPVNEYQTLVDSVLFSWAVGDLWLYTLKLSXXXXXXX 512
RS + + + GL VP EQ+PVNEY L DSVL+SWA + L+L
Sbjct: 61 RSGFAGGVPSWDPGLEIQVPFEQRPVNEYSALKDSVLYSWAELSPGSFFLRLGSLWLITF 120

Query: 513 XXXXWPIMATSVDAEKELFKXXXXXXXXXXXXXXXXXXRMYLGWA 647
PI A S K+ K R+YLGW+
Sbjct: 121 TVLAAPIAAASFSPGKDPLKFVLAAGIGTLLLVSLVVLRIYLGWS 165


>tr|B6IDH6|B6IDH6_ARATH At5g11840 OS=Arabidopsis thaliana PE=2 SV=1
Length = 265

Score = 53.5 bits (127), Expect = 1e-05
Identities = 34/89 (38%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +3

Query: 384 PVPLEQQPVNEYQTLVDSVLFSWAVGDLWLYTLKLSXXXXXXXXXXXWPI-MATSVDAEK 560
PVP EQQP+NEYQ+L S FSWA GDL Y+ +L P+ S+ E
Sbjct: 62 PVPPEQQPINEYQSLSTSFPFSWASGDLIEYSTRLFLTGASFAFFVGLPVSWFGSIGPEY 121

Query: 561 ELFKXXXXXXXXXXXXXXXXXXRMYLGWA 647
E K RMYLGWA
Sbjct: 122 EPVKRILAASSSGIFVVTLAVVRMYLGWA 150


>tr|A5BUA8|A5BUA8_VITVI Putative uncharacterized protein (Chromosome
chr7 scaffold_20, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00019630001 PE=4 SV=1
Length = 309

Score = 52.4 bits (124), Expect = 2e-05
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 3/143 (2%)
Frame = +3

Query: 228 SVEKAIIGCTSHCSKTLQIFAKLRKGG---KSGNNGDHRSRYGRPFSNGNSGLRSPVPLE 398
SV + IG ++ S T+Q + K RK G ++ + G P + + GL VP E
Sbjct: 13 SVRQVTIGSSTFSSWTIQ-YHKGRKLGISIRALKDETDGGTSGIPGGSWDPGLEIEVPFE 71

Query: 399 QQPVNEYQTLVDSVLFSWAVGDLWLYTLKLSXXXXXXXXXXXWPIMATSVDAEKELFKXX 578
Q+PVNEY +L D L+SW + ++L PI A S + +E +
Sbjct: 72 QRPVNEYSSLKDGPLYSWGELSPGSFFIRLGGLWLVAFTVLGVPIAAASFNPSREPLRFV 131

Query: 579 XXXXXXXXXXXXXXXXRMYLGWA 647
R+YLGW+
Sbjct: 132 LAAGTGTLFLVSLIVLRIYLGWS 154


>tr|Q53WK2|Q53WK2_ORYSJ Os05g0539900 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0052K01.20 PE=4 SV=1
Length = 176

Score = 52.0 bits (123), Expect = 3e-05
Identities = 37/121 (30%), Positives = 49/121 (40%), Gaps = 6/121 (4%)
Frame = +3

Query: 303 GGKSGNNGDHRSRYGRPFSNGNSGLRS----PVPLEQQPVNEYQTLVDSVLFSWAVGDLW 470
G + G R R+ P S S + PVP EQ PVNEY++L S+ FSWA GDL
Sbjct: 29 GSRGRRRGRGRRRFAVPPSRNGSSSQGTEWCPVPPEQLPVNEYESLAASLPFSWAAGDLT 88

Query: 471 LYTLKLSXXXXXXXXXXXWPIMATS--VDAEKELFKXXXXXXXXXXXXXXXXXXRMYLGW 644
+Y +L+ P+ + A + RMYLGW
Sbjct: 89 VYCSRLALTGAAFALFVGLPVASFGGRGGAGGDAVHLALGATGSGILAVTLAVVRMYLGW 148

Query: 645 A 647
A
Sbjct: 149 A 149