DK957752 |
Clone id |
TST39A01NGRL0029_D03 |
Library |
TST39 |
Length |
641 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_D03. 5' end sequence. |
Accession |
DK957752 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3195Contig1 |
Sequence |
CCTTTCTCTCTCTCGCGCACTGTGCCCCCTTGCCCCCTACCTATCCATCACCTCTTTTGA AAACCCCCTTTCTCCCGTCCCCCTATCCCTCAGCAACCAAGCAAGCTGGAGTGCCGTCCC GTCCTTTATCTTCTTCCCCCCCTCTCCTGCTTCTCAGATTTCCCTCTAGATGTGCAGGGC TGCTCAACTCTGAGGAGGGTAGTTTTCTCAAAGGGGCGTAGGCCAGAATACCCGATTTCT GTCCTGGGAAGATGTCGCACCTAGCAACCCTGAGCTTGACGGACCCACGCTCAGAGATGC GTGACTGTGGCAGCCTCAGATCTCCCGAGAGCTCCGAGGAGAAGATTATCTGCCCAAAGC CTCAGCGTGTTGCAGTGGCAAACCTTAGATCTGTAGATTTCATCAAGCCCATCCGCCAAG TGAGAAGCATGTCTCCTGTTGCAATTGATGGCAGCGATGCTGGCTGTGAGATCTTGGATA TCTTTCTAAGCAAGAGCCCATATGGGGACTTTGGATGTTCTCCCCCGTTTTTTTCCGGTT CTCCTCCTTCCAGAGCCGCGAATCCGCTGGTGCGGGACTCACAATTTTTGCATCCACATG CATACCCTGTGGCAACCTCACAAGCCAAGGTTCCACAAGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A0QUP1 |
Definition |
sp|A0QUP1|DNLI_MYCS2 Probable DNA ligase OS=Mycobacterium smegmatis |
Align length |
125 |
Score (bit) |
32.0 |
E-value |
2.7 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NS33 |
Definition |
tr|A9NS33|A9NS33_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
134 |
Score (bit) |
57.4 |
E-value |
7.0e-07 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957752|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0029_D03, 5' (627 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NS33|A9NS33_PICSI Putative uncharacterized protein OS=Picea... 57 7e-07 tr|A9RTU3|A9RTU3_PHYPA Predicted protein OS=Physcomitrella paten... 57 9e-07 tr|A9S4R0|A9S4R0_PHYPA Predicted protein OS=Physcomitrella paten... 57 1e-06 tr|A9NLR6|A9NLR6_PICSI Putative uncharacterized protein OS=Picea... 56 2e-06 tr|A7P385|A7P385_VITVI Chromosome chr1 scaffold_5, whole genome ... 54 1e-05 tr|A5AES8|A5AES8_VITVI Putative uncharacterized protein OS=Vitis... 54 1e-05 tr|A8TU70|A8TU70_PAESU Putative uncharacterized protein OS=Paeon... 46 0.002 tr|A9NLK5|A9NLK5_PICSI Putative uncharacterized protein OS=Picea... 45 0.005 tr|Q38JI3|Q38JI3_SOLTU Putative uncharacterized protein OS=Solan... 43 0.014 tr|B8LMK2|B8LMK2_PICSI Putative uncharacterized protein OS=Picea... 43 0.014 tr|Q1KUV3|Q1KUV3_9ROSI Putative uncharacterized protein OS=Cleom... 42 0.040 tr|Q1KUR8|Q1KUR8_9ROSI Putative uncharacterized protein OS=Cleom... 41 0.052 tr|Q9LF17|Q9LF17_ARATH Putative uncharacterized protein T21H19_3... 40 0.15 tr|Q9FPI4|Q9FPI4_ARATH AT5g16110 (Putative uncharacterized prote... 40 0.15 tr|Q0WL40|Q0WL40_ARATH Putative uncharacterized protein At5g1611... 40 0.15 tr|Q2V996|Q2V996_SOLTU Putative uncharacterized protein OS=Solan... 39 0.33 tr|A9NYP6|A9NYP6_PICSI Putative uncharacterized protein OS=Picea... 37 0.97 tr|Q8LF93|Q8LF93_ARATH Putative uncharacterized protein (At3g025... 37 1.3 tr|A9PDT4|A9PDT4_POPTR Putative uncharacterized protein OS=Popul... 36 2.2 tr|A8X9A1|A8X9A1_CAEBR Putative uncharacterized protein OS=Caeno... 36 2.2 tr|B6T7H6|B6T7H6_MAIZE Putative uncharacterized protein OS=Zea m... 35 2.8 tr|A7PAQ8|A7PAQ8_VITVI Chromosome chr14 scaffold_9, whole genome... 35 2.8 tr|A6EE86|A6EE86_9SPHI Putative uncharacterized protein OS=Pedob... 35 3.7 tr|A9RG87|A9RG87_PHYPA Predicted protein OS=Physcomitrella paten... 35 3.7 tr|B4JLM3|B4JLM3_DROGR GH12892 OS=Drosophila grimshawi GN=GH1289... 35 4.8 tr|Q9CA32|Q9CA32_ARATH Putative uncharacterized protein T26J14.6... 35 4.8 tr|A5PAW3|A5PAW3_9SPHN Methionine synthase I cobalamin-binding d... 34 6.3 tr|Q2CDC3|Q2CDC3_9RHOB Phosphoribosylformylglycinamidine cyclo-l... 34 8.1 tr|B7FGX3|B7FGX3_MEDTR Putative uncharacterized protein OS=Medic... 34 8.2
>tr|A9NS33|A9NS33_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 166
Score = 57.4 bits (137), Expect = 7e-07 Identities = 47/134 (35%), Positives = 61/134 (45%), Gaps = 8/134 (5%) Frame = +1
Query: 238 MSHLATLSLTDPRSEMRDCGSLRSP---ESSEEKIICPKPQRVAVANLRSVDFIKPIRQV 408 M HLA + EM++ G R+ E EE + CPKP+R +A + K R+ Sbjct: 1 MQHLAAKNNLVESGEMKEMGRPRAAFMREKCEEVVFCPKPRRAGLAINPIPELSKSTRRH 60
Query: 409 RSMSPVAIDGSDAGCEILDIFLSKS---PYXXXXXXXXXXXXXXXXRAANPLVRDSQFLH 579 RS SP + S+ G EILDIFLS+S RA NPLV D F+H Sbjct: 61 RSHSP-EYNESEPGVEILDIFLSRSGCGDSLNFGCSPPYFNGSPPSRADNPLVHDINFIH 119
Query: 580 P--HAYPVATSQAK 615 A P S+ K Sbjct: 120 QIVQASPSTLSKPK 133
>tr|A9RTU3|A9RTU3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_160948 PE=4 SV=1 Length = 183
Score = 57.0 bits (136), Expect = 9e-07 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 3/91 (3%) Frame = +1
Query: 313 ESSEEKIICPKPQRVAVANLRSVDFIKPIRQVRSMSPVAIDGSDAGCEILDIFLSKSPY- 489 E EE++ICP+P+R N+ +F+KP R+ +S S ++ S A E+LDIFL+K Y Sbjct: 39 EGGEEELICPQPRRPTSVNIPGGEFMKPTRRHKSKSSARVE-SVACFELLDIFLNKGGYR 97
Query: 490 --XXXXXXXXXXXXXXXXRAANPLVRDSQFL 576 RA NPL+ DS+FL Sbjct: 98 DVPNFGCSPPNFCGSPPARAGNPLIHDSKFL 128
>tr|A9S4R0|A9S4R0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_162842 PE=4 SV=1 Length = 162
Score = 56.6 bits (135), Expect = 1e-06 Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 6/110 (5%) Frame = +1
Query: 268 DPRSEMRDCGSLRSP---ESSEEKIICPKPQRVAVANLRSVDFIKPIRQVRSMSPVAIDG 438 D R+E + RS ES EE+++CP+P+R A A+ D +KP R+ +S S +G Sbjct: 21 DSRTEKNEKRRSRSGLLVESGEEEVLCPRPRRPANASCPVYDSVKPSRRHKSKSSACPEG 80
Query: 439 SDAGCEILDIFLSKSPY---XXXXXXXXXXXXXXXXRAANPLVRDSQFLH 579 E+LDIF+SK Y RA NPL+ D+ FLH Sbjct: 81 V-VCFELLDIFVSKGGYRDISGFSSSPPTFCGSPPSRAGNPLIHDAAFLH 129
>tr|A9NLR6|A9NLR6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 152
Score = 56.2 bits (134), Expect = 2e-06 Identities = 44/120 (36%), Positives = 60/120 (50%), Gaps = 9/120 (7%) Frame = +1
Query: 283 MRDCGSLRSP----ESSEEKIICPKPQRVAVANLRSVDFIKPIRQVRSMSPVAIDGSDAG 450 M++ G LR+ +S EE +ICPKP+R+ + N S + K +R RS +P + +AG Sbjct: 1 MKEMGRLRAAFMREKSEEEVVICPKPRRLGLVNHPSPELPKHLRWQRSHTP-EHNELNAG 59
Query: 451 CEILDIFLSK---SPYXXXXXXXXXXXXXXXXRAANPLVRDSQFLHPH--AYPVATSQAK 615 EILDI LSK S R NPLV D QF+H + P A S+ K Sbjct: 60 FEILDIILSKSGCSDSSNLGCSPPYFCGSPPSRVDNPLVHDVQFIHQRVPSSPSAISKPK 119
>tr|A7P385|A7P385_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030344001 PE=4 SV=1 Length = 174
Score = 53.5 bits (127), Expect = 1e-05 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 7/115 (6%) Frame = +1
Query: 304 RSPESSEEK--IICPKPQRVAVANLRSVDFIKPIRQVRSMSPVAIDGSDAGCEILDIFLS 477 RS +SE + ++CPKP+R+ + N VD ++PIR S + + S +G ++LDI L+ Sbjct: 15 RSVPASERRAPVVCPKPRRLGLLNATIVDPLRPIRWHLS-NQTELSDSKSGTDLLDIILA 73
Query: 478 KSPY-----XXXXXXXXXXXXXXXXRAANPLVRDSQFLHPHAYPVATSQAKVPQG 627 K Y R ANPL++D++F P++ VP G Sbjct: 74 KGGYGAESCTQVASSPPFFSGSPPSRVANPLIQDARFGDEKLNPISPPLVSVPSG 128
>tr|A5AES8|A5AES8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034771 PE=4 SV=1 Length = 328
Score = 53.5 bits (127), Expect = 1e-05 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 7/115 (6%) Frame = +1
Query: 304 RSPESSEEK--IICPKPQRVAVANLRSVDFIKPIRQVRSMSPVAIDGSDAGCEILDIFLS 477 RS +SE + ++CPKP+R+ + N VD ++PIR S + + S +G ++LDI L+ Sbjct: 15 RSVPASERRAPVVCPKPRRLGLLNATIVDPLRPIRWHLS-NQTELSDSKSGTDLLDIILA 73
Query: 478 KSPY-----XXXXXXXXXXXXXXXXRAANPLVRDSQFLHPHAYPVATSQAKVPQG 627 K Y R ANPL++D++F P++ VP G Sbjct: 74 KGGYGAESCTQVASSPPFFSGSPPSRVANPLIQDARFGDEKLNPISPPLVSVPSG 128
>tr|A8TU70|A8TU70_PAESU Putative uncharacterized protein OS=Paeonia suffruticosa PE=2 SV=1 Length = 183
Score = 46.2 bits (108), Expect = 0.002 Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 6/124 (4%) Frame = +1
Query: 274 RSEMRDCGSLRSPESSEEKIICPKPQRVAVANLRSVDFIKPIRQVRSMSPVAIDGSDAGC 453 R EMR S+ + + ++CPKP+R+ + + D I+P+R S S AG Sbjct: 15 REEMRSPVSIPMSDR-RDSVVCPKPRRMGLLDSTISDPIRPLRWHLSHHQSEYSDSRAGT 73
Query: 454 EILDIFLSKSPY------XXXXXXXXXXXXXXXXRAANPLVRDSQFLHPHAYPVATSQAK 615 ++LDI LSK Y R ANP+V D++F P A Q Sbjct: 74 DLLDIILSKGGYSVEQSGNQLASSPPFFSGSPPSRVANPVVLDARFGDEKITPSAPLQPL 133
Query: 616 VPQG 627 + G Sbjct: 134 LSPG 137
>tr|A9NLK5|A9NLK5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 177
Score = 44.7 bits (104), Expect = 0.005 Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 9/130 (6%) Frame = +1
Query: 232 GKMSHLATLS----LTDPRSEMRDCGSLRSPESSEEKIICPKPQRVAVANLRSVD--FIK 393 G M LATL+ L D +R + + S+ ++ICP+P+R+ + + D K Sbjct: 9 GGMQELATLNGPDCLADSNVRVRQRSGIHR-DMSQRQVICPEPRRLPIVPSLADDHEIHK 67
Query: 394 PIRQVRSMSPVAIDGSDAGCEILDIFLSKSPY---XXXXXXXXXXXXXXXXRAANPLVRD 564 R++ S S + +G +A EILDIF SKS Y R+ NPL+ D Sbjct: 68 SGRRLHSHSAMQTEG-EACREILDIFFSKSGYGDQANVNSSLPYFCGSPPSRSHNPLIHD 126
Query: 565 SQFLHPHAYP 594 +F+ P Sbjct: 127 VKFIKKELAP 136
>tr|Q38JI3|Q38JI3_SOLTU Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1 Length = 183
Score = 43.1 bits (100), Expect = 0.014 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 10/108 (9%) Frame = +1
Query: 304 RSPESSEEKIICPKPQRVAVANLRSVDFIKPIRQVRSMSPVAIDGS----DAGCEILDIF 471 R+ S ++CPKP+++ + SV+ +PIR + M + + AG E+LDI Sbjct: 22 RADISVSNGVVCPKPRKLGFFDSDSVNVEEPIRPYQLMQFINEEMEACELKAGAELLDII 81
Query: 472 LSKSPY------XXXXXXXXXXXXXXXXRAANPLVRDSQFLHPHAYPV 597 L+K Y RA NPL++D+QF + + P+ Sbjct: 82 LTKGSYEVDRANFEVDSSPPFFYGSPPSRAGNPLIQDAQFGNHNFVPI 129
>tr|B8LMK2|B8LMK2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 167
Score = 43.1 bits (100), Expect = 0.014 Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 9/128 (7%) Frame = +1
Query: 238 MSHLATLS----LTDPRSEMRDCGSLRSPESSEEKIICPKPQRVAVANLRSVD--FIKPI 399 M LATL+ L D +R + + S+ ++ICP+P+R+ + + D K Sbjct: 1 MQELATLNGPDCLADSNVRVRQRSGIHR-DMSQRQVICPEPRRLPIVPSLADDHEIHKSG 59
Query: 400 RQVRSMSPVAIDGSDAGCEILDIFLSKSPY---XXXXXXXXXXXXXXXXRAANPLVRDSQ 570 R++ S S + +G +A EILDIF SKS Y R+ NPL+ D + Sbjct: 60 RRLHSHSAMQTEG-EACREILDIFFSKSGYGDQANVNSSLPYFCGSPPSRSHNPLIHDVK 118
Query: 571 FLHPHAYP 594 F+ P Sbjct: 119 FIKKELAP 126
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