DK957646 |
Clone id |
TST39A01NGRL0028_O17 |
Library |
TST39 |
Length |
589 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_O17. 5' end sequence. |
Accession |
DK957646 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
AGCAGTAGAGGATAGTTTGTGTCGCGAAGAGGGGCGTGAAGATGGCGATTCGAATGCTCA ATCCCAATGCGGAGACTCTCAACAAGCTTGCTGCTCTCGCCATGAACATCAACGCAGCTA AGGGCCTGCAGGACGTGCTCAAGACCAACCTCGGCCCTAAGGGTACCATTAAGATGTTAG TCGGAGGTGCTGGAGATATAAGGTTGACAAAGGATGGAAACACACTTCTGAAGGAAATGC AAATTCAAAATCCTACAGCGATAATGATTGCAAGAACTGCAGTTGCTCAAGATGATATAA ATGTAGATGGAACTACATCCACAGTTCTTTTTATTGGAGAGCTAATGAAGCAGGCTGAGC GCTACATATCAGAAGGGATGCATCCACGTGTATTGGTGGATGGATTTGAGATTGCAAAGA AAGCAACCTTAGAGTTTCTTGAAAAGTTCAAAACTCCTGTGGTGATGGGCGACTCACCTG ACAAAGAGATCCTAAAGATGGTTGCAAGAACCACCTTGAGGACAAAGGTCTATGAGTCCC TCGCCGATCAACTCACAGAGATTGTTGTGAATGGGGTTCTCTGCATTCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5ZJ54 |
Definition |
sp|Q5ZJ54|TCPZ_CHICK T-complex protein 1 subunit zeta OS=Gallus gallus |
Align length |
182 |
Score (bit) |
223.0 |
E-value |
7.0e-58 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PAN6 |
Definition |
tr|A7PAN6|A7PAN6_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
182 |
Score (bit) |
320.0 |
E-value |
4.0e-86 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957646|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0028_O17, 5' (589 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PAN6|A7PAN6_VITVI Chromosome chr14 scaffold_9, whole genome... 320 4e-86 tr|Q1KUM7|Q1KUM7_9ROSI Putative uncharacterized protein OS=Cleom... 316 5e-85 tr|A9PFM2|A9PFM2_POPTR Putative uncharacterized protein OS=Popul... 312 8e-84 tr|Q1KUS1|Q1KUS1_9ROSI Putative uncharacterized protein OS=Cleom... 312 1e-83 tr|Q9M888|Q9M888_ARATH Putative chaperonin OS=Arabidopsis thalia... 310 4e-83 tr|Q8LFN3|Q8LFN3_ARATH Putative chaperonin OS=Arabidopsis thalia... 310 4e-83 tr|Q94EZ9|Q94EZ9_ARATH Putative chaperonin OS=Arabidopsis thalia... 308 1e-82 tr|Q6ASR1|Q6ASR1_ORYSJ Os05g0147400 protein OS=Oryza sativa subs... 308 2e-82 tr|B8AXY6|B8AXY6_ORYSI Putative uncharacterized protein OS=Oryza... 308 2e-82 tr|Q8L7N0|Q8L7N0_ARATH TCP-1 chaperonin-like protein (At5g16070)... 307 3e-82 tr|A9SYM5|A9SYM5_PHYPA Predicted protein OS=Physcomitrella paten... 303 6e-81 tr|Q9LFR8|Q9LFR8_ARATH TCP-1 chaperonin-like protein OS=Arabidop... 301 2e-80 tr|B6U118|B6U118_MAIZE T-complex protein 1 subunit zeta OS=Zea m... 300 4e-80 tr|A9SWQ2|A9SWQ2_PHYPA Predicted protein OS=Physcomitrella paten... 300 4e-80 tr|B6T8Q5|B6T8Q5_MAIZE T-complex protein 1 subunit zeta OS=Zea m... 299 9e-80 tr|B4FF57|B4FF57_MAIZE Putative uncharacterized protein OS=Zea m... 299 9e-80 tr|A3AZY2|A3AZY2_ORYSJ Putative uncharacterized protein OS=Oryza... 298 1e-79 tr|A4S6P7|A4S6P7_OSTLU Predicted protein OS=Ostreococcus lucimar... 255 1e-66 tr|Q00WU8|Q00WU8_OSTTA Putative chaperonin (ISS) OS=Ostreococcus... 245 1e-63 tr|A8J014|A8J014_CHLRE T-complex protein, zeta subunit OS=Chlamy... 245 2e-63 tr|B6PMY2|B6PMY2_BRAFL Putative uncharacterized protein OS=Branc... 224 3e-57 tr|Q52KG9|Q52KG9_MOUSE Chaperonin containing Tcp1, subunit 6a (Z... 221 2e-56 tr|Q3TIX8|Q3TIX8_MOUSE Putative uncharacterized protein OS=Mus m... 221 2e-56 tr|Q3TI05|Q3TI05_MOUSE Chaperonin containing Tcp1, subunit 6a (Z... 221 2e-56 tr|Q3MHS9|Q3MHS9_RAT Chaperonin subunit 6a (Zeta) OS=Rattus norv... 221 2e-56 tr|Q59ET3|Q59ET3_HUMAN Chaperonin containing TCP1, subunit 6A is... 221 2e-56 tr|B2R9K8|B2R9K8_HUMAN cDNA, FLJ94440, highly similar to Homo sa... 221 2e-56 tr|Q3TW97|Q3TW97_MOUSE Putative uncharacterized protein OS=Mus m... 220 5e-56 tr|A7RLY5|A7RLY5_NEMVE Predicted protein OS=Nematostella vectens... 219 7e-56 tr|Q3TI62|Q3TI62_MOUSE Putative uncharacterized protein OS=Mus m... 219 9e-56
>tr|A7PAN6|A7PAN6_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00038194001 PE=3 SV=1 Length = 535
Score = 320 bits (820), Expect = 4e-86 Identities = 162/182 (89%), Positives = 174/182 (95%) Frame = +3
Query: 42 MAIRMLNPNAETLNKLAALAMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIRLTKDGN 221 M++R+LNPNAE LNK AAL MNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDI+LTKDGN Sbjct: 1 MSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGN 60
Query: 222 TLLKEMQIQNPTAIMIARTAVAQDDINVDGTTSTVLFIGELMKQAERYISEGMHPRVLVD 401 TLLKEMQIQNPTAIMIARTAVAQDD + DGTTSTVLFIGELMKQ+ERYI EGMHPRVLVD Sbjct: 61 TLLKEMQIQNPTAIMIARTAVAQDDTSGDGTTSTVLFIGELMKQSERYIDEGMHPRVLVD 120
Query: 402 GFEIAKKATLEFLEKFKTPVVMGDSPDKEILKMVARTTLRTKVYESLADQLTEIVVNGVL 581 GFEIAK+ATL+FLEKFKTPVVMGD PDKEILKMVARTTLRTK+YE++ADQLT+IVVN VL Sbjct: 121 GFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYEAMADQLTDIVVNAVL 180
Query: 582 CI 587 CI Sbjct: 181 CI 182
>tr|Q1KUM7|Q1KUM7_9ROSI Putative uncharacterized protein OS=Cleome spinosa PE=3 SV=1 Length = 535
Score = 316 bits (810), Expect = 5e-85 Identities = 160/182 (87%), Positives = 173/182 (95%) Frame = +3
Query: 42 MAIRMLNPNAETLNKLAALAMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIRLTKDGN 221 M++R+LNPNAE LNK AAL MNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDI+LTKDGN Sbjct: 1 MSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGN 60
Query: 222 TLLKEMQIQNPTAIMIARTAVAQDDINVDGTTSTVLFIGELMKQAERYISEGMHPRVLVD 401 TLLKEMQIQNPTAIMIARTAVAQDDI+ DGTTSTV+FIGELMKQ+ERYI EGMHPRVLVD Sbjct: 61 TLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERYIDEGMHPRVLVD 120
Query: 402 GFEIAKKATLEFLEKFKTPVVMGDSPDKEILKMVARTTLRTKVYESLADQLTEIVVNGVL 581 GFEIAK+ATL+FLEKFKT +MG+ PDKEILKMVARTTLRTK+YESLADQLT+IVVN VL Sbjct: 121 GFEIAKRATLQFLEKFKTSAIMGNEPDKEILKMVARTTLRTKLYESLADQLTDIVVNSVL 180
Query: 582 CI 587 CI Sbjct: 181 CI 182
>tr|A9PFM2|A9PFM2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 535
Score = 312 bits (800), Expect = 8e-84 Identities = 159/182 (87%), Positives = 172/182 (94%) Frame = +3
Query: 42 MAIRMLNPNAETLNKLAALAMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIRLTKDGN 221 M+IR+LNPNAE LNK AAL MNINAAKGLQDVLK+NLGPKGTIKMLVGGAGDI+LTKDGN Sbjct: 1 MSIRLLNPNAEVLNKSAALHMNINAAKGLQDVLKSNLGPKGTIKMLVGGAGDIKLTKDGN 60
Query: 222 TLLKEMQIQNPTAIMIARTAVAQDDINVDGTTSTVLFIGELMKQAERYISEGMHPRVLVD 401 TLLKEMQIQNPTAIMIARTAVAQDDI+ DGTTSTV+FIGELMKQ+ER I EGMHPRVLVD Sbjct: 61 TLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVD 120
Query: 402 GFEIAKKATLEFLEKFKTPVVMGDSPDKEILKMVARTTLRTKVYESLADQLTEIVVNGVL 581 GFEIAK+ATL+FLEKFKTPVVMGD PD+EILKMVART LRTK++E+LADQLT IVVN VL Sbjct: 121 GFEIAKRATLQFLEKFKTPVVMGDEPDREILKMVARTALRTKLHEALADQLTNIVVNSVL 180
Query: 582 CI 587 CI Sbjct: 181 CI 182
>tr|Q1KUS1|Q1KUS1_9ROSI Putative uncharacterized protein OS=Cleome spinosa PE=3 SV=1 Length = 555
Score = 312 bits (799), Expect = 1e-83 Identities = 165/202 (81%), Positives = 175/202 (86%), Gaps = 20/202 (9%) Frame = +3
Query: 42 MAIRMLNPNAETLNKLAALAMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIRLTKDGN 221 M++R+LNPNAE LNK AAL MNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDI+LTKDGN Sbjct: 1 MSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGN 60
Query: 222 TLLKEMQIQNPTAIMIARTAVAQDDINVDGTTSTVLFIGELMKQAERYISE--------- 374 TLLKEMQIQNPTAIMIARTAVAQDDI+ DGTTSTVLFIGELMKQ+ERYI E Sbjct: 61 TLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVLFIGELMKQSERYIDEDLAQGSLPF 120
Query: 375 -----------GMHPRVLVDGFEIAKKATLEFLEKFKTPVVMGDSPDKEILKMVARTTLR 521 GMHPRVLVDGFEIAK+ATL+FLEKFKTPVVMGD PDKEILKMVARTTLR Sbjct: 121 RFWYLFGILRNGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLR 180
Query: 522 TKVYESLADQLTEIVVNGVLCI 587 TK+YESLADQLT+IVVN VLCI Sbjct: 181 TKLYESLADQLTDIVVNAVLCI 202
>tr|Q9M888|Q9M888_ARATH Putative chaperonin OS=Arabidopsis thaliana GN=At3g02530/F16B3.16 PE=2 SV=1 Length = 535
Score = 310 bits (794), Expect = 4e-83 Identities = 157/182 (86%), Positives = 171/182 (93%) Frame = +3
Query: 42 MAIRMLNPNAETLNKLAALAMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIRLTKDGN 221 M++R+LNPNAE LNK AAL M INAAKGLQDVLK+NLGPKGTIKMLVGG+GDI+LTKDGN Sbjct: 1 MSVRVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGN 60
Query: 222 TLLKEMQIQNPTAIMIARTAVAQDDINVDGTTSTVLFIGELMKQAERYISEGMHPRVLVD 401 TLLKEMQIQNPTAIMIARTAVAQDDI+ DGTTSTV+FIGELMKQ+ER I EGMHPRVLVD Sbjct: 61 TLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVD 120
Query: 402 GFEIAKKATLEFLEKFKTPVVMGDSPDKEILKMVARTTLRTKVYESLADQLTEIVVNGVL 581 GFEIAK+ATL+FL+ FKTPVVMGD PDKEILKMVARTTLRTK+YE LADQLT+IVVN VL Sbjct: 121 GFEIAKRATLQFLDTFKTPVVMGDEPDKEILKMVARTTLRTKLYEGLADQLTDIVVNSVL 180
Query: 582 CI 587 CI Sbjct: 181 CI 182
>tr|Q8LFN3|Q8LFN3_ARATH Putative chaperonin OS=Arabidopsis thaliana PE=2 SV=1 Length = 535
Score = 310 bits (794), Expect = 4e-83 Identities = 157/182 (86%), Positives = 171/182 (93%) Frame = +3
Query: 42 MAIRMLNPNAETLNKLAALAMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIRLTKDGN 221 M++R+LNPNAE LNK AAL M INAAKGLQDVLK+NLGPKGTIKMLVGG+GDI+LTKDGN Sbjct: 1 MSVRVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGN 60
Query: 222 TLLKEMQIQNPTAIMIARTAVAQDDINVDGTTSTVLFIGELMKQAERYISEGMHPRVLVD 401 TLLKEMQIQNPTAIMIARTAVAQDDI+ DGTTSTV+FIGELMKQ+ER I EGMHPRVLVD Sbjct: 61 TLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVD 120
Query: 402 GFEIAKKATLEFLEKFKTPVVMGDSPDKEILKMVARTTLRTKVYESLADQLTEIVVNGVL 581 GFEIAK+ATL+FL+ FKTPVVMGD PDKEILKMVARTTLRTK+YE LADQLT+IVVN VL Sbjct: 121 GFEIAKRATLQFLDTFKTPVVMGDEPDKEILKMVARTTLRTKLYEGLADQLTDIVVNSVL 180
Query: 582 CI 587 CI Sbjct: 181 CI 182
>tr|Q94EZ9|Q94EZ9_ARATH Putative chaperonin OS=Arabidopsis thaliana GN=F16B3.16 PE=2 SV=1 Length = 535
Score = 308 bits (790), Expect = 1e-82 Identities = 156/182 (85%), Positives = 170/182 (93%) Frame = +3
Query: 42 MAIRMLNPNAETLNKLAALAMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIRLTKDGN 221 M++R+LNPNAE LNK AL M INAAKGLQDVLK+NLGPKGTIKMLVGG+GDI+LTKDGN Sbjct: 1 MSVRVLNPNAEVLNKSTALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGN 60
Query: 222 TLLKEMQIQNPTAIMIARTAVAQDDINVDGTTSTVLFIGELMKQAERYISEGMHPRVLVD 401 TLLKEMQIQNPTAIMIARTAVAQDDI+ DGTTSTV+FIGELMKQ+ER I EGMHPRVLVD Sbjct: 61 TLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVD 120
Query: 402 GFEIAKKATLEFLEKFKTPVVMGDSPDKEILKMVARTTLRTKVYESLADQLTEIVVNGVL 581 GFEIAK+ATL+FL+ FKTPVVMGD PDKEILKMVARTTLRTK+YE LADQLT+IVVN VL Sbjct: 121 GFEIAKRATLQFLDTFKTPVVMGDEPDKEILKMVARTTLRTKLYEGLADQLTDIVVNSVL 180
Query: 582 CI 587 CI Sbjct: 181 CI 182
>tr|Q6ASR1|Q6ASR1_ORYSJ Os05g0147400 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0077J22.11 PE=3 SV=1 Length = 535
Score = 308 bits (788), Expect = 2e-82 Identities = 156/182 (85%), Positives = 169/182 (92%) Frame = +3
Query: 42 MAIRMLNPNAETLNKLAALAMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIRLTKDGN 221 M++R+LNPNAE LNK AAL MNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDI+LTKDGN Sbjct: 1 MSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGN 60
Query: 222 TLLKEMQIQNPTAIMIARTAVAQDDINVDGTTSTVLFIGELMKQAERYISEGMHPRVLVD 401 TLLKEMQIQNPTAIMIARTAVAQDD + DGTTSTVLFIGELMKQ+ER I EG HPR LVD Sbjct: 61 TLLKEMQIQNPTAIMIARTAVAQDDTSGDGTTSTVLFIGELMKQSERCIDEGTHPRFLVD 120
Query: 402 GFEIAKKATLEFLEKFKTPVVMGDSPDKEILKMVARTTLRTKVYESLADQLTEIVVNGVL 581 GF++AK+ATLEFLEKFKT VVMGD PD+EILKM+ARTTLRTK+YE LADQLT+IVVN VL Sbjct: 121 GFDVAKRATLEFLEKFKTSVVMGDEPDREILKMIARTTLRTKLYEGLADQLTDIVVNAVL 180
Query: 582 CI 587 CI Sbjct: 181 CI 182
>tr|B8AXY6|B8AXY6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18449 PE=4 SV=1 Length = 535
Score = 308 bits (788), Expect = 2e-82 Identities = 156/182 (85%), Positives = 169/182 (92%) Frame = +3
Query: 42 MAIRMLNPNAETLNKLAALAMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIRLTKDGN 221 M++R+LNPNAE LNK AAL MNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDI+LTKDGN Sbjct: 1 MSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGN 60
Query: 222 TLLKEMQIQNPTAIMIARTAVAQDDINVDGTTSTVLFIGELMKQAERYISEGMHPRVLVD 401 TLLKEMQIQNPTAIMIARTAVAQDD + DGTTSTVLFIGELMKQ+ER I EG HPR LVD Sbjct: 61 TLLKEMQIQNPTAIMIARTAVAQDDTSGDGTTSTVLFIGELMKQSERCIDEGTHPRFLVD 120
Query: 402 GFEIAKKATLEFLEKFKTPVVMGDSPDKEILKMVARTTLRTKVYESLADQLTEIVVNGVL 581 GF++AK+ATLEFLEKFKT VVMGD PD+EILKM+ARTTLRTK+YE LADQLT+IVVN VL Sbjct: 121 GFDVAKRATLEFLEKFKTSVVMGDEPDREILKMIARTTLRTKLYEGLADQLTDIVVNAVL 180
Query: 582 CI 587 CI Sbjct: 181 CI 182
>tr|Q8L7N0|Q8L7N0_ARATH TCP-1 chaperonin-like protein (At5g16070) OS=Arabidopsis thaliana GN=At5g16070 PE=2 SV=1 Length = 535
Score = 307 bits (786), Expect = 3e-82 Identities = 156/182 (85%), Positives = 170/182 (93%) Frame = +3
Query: 42 MAIRMLNPNAETLNKLAALAMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIRLTKDGN 221 M++R+LNPNAE LNK AAL M INAAKGLQDVLK+NLGPKGTIKMLVGG+GDI+LTKDGN Sbjct: 1 MSVRVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGN 60
Query: 222 TLLKEMQIQNPTAIMIARTAVAQDDINVDGTTSTVLFIGELMKQAERYISEGMHPRVLVD 401 TLLKEMQIQNPTAIMIARTAVAQDDI+ DGTTSTV+FIGELMKQ+ER I EGMHPRVLVD Sbjct: 61 TLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVD 120
Query: 402 GFEIAKKATLEFLEKFKTPVVMGDSPDKEILKMVARTTLRTKVYESLADQLTEIVVNGVL 581 GFEIAK+ATL+FL+ FKTPVVMGD DKEILKMVARTTLRTK+YE LADQLT+IVVN VL Sbjct: 121 GFEIAKRATLQFLDNFKTPVVMGDEVDKEILKMVARTTLRTKLYEGLADQLTDIVVNSVL 180
Query: 582 CI 587 CI Sbjct: 181 CI 182
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