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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK957577
Clone id TST39A01NGRL0028_L20
Library
Length 608
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_L20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTGCAGAAGAGGCTGGCAGGCAGCTAGCTGATAGCCGCAATTCTAATCTCTATAGTACTG
CGGCTATATTAGGTTTCCATCAATAATCTAGCTGAAGGTTTTCGTTTTTGGGATCTATCC
TTTTCTTCTTGTGAATTTCGGTTTACCTATAATTATACTCATGGCCAACCGAGTCCCCCT
GGTGATCGCTGTGCTGGGCTTGCTACTTGTGTTATCTATGGTTAGCACCATCGCAGAGGC
CAAGAAGAAGCCCAAGAAGCTATCCTTCTTCATGTTCATTGCCGTGCAAAACAATAGCTT
TCTGGACAACCCCAACGGGCAGTTCACGGCCGTGCTGTCCGGCGAGGCCCCCGTGACGCC
GCAGCCCTTCGCCTTCGGCAATCTGCACACCTTTGACAATCCGCTGTCCAAGACGATGTC
ACTGGCCAATCCGGCCGACAGGGTTGGCCACGTGCAGGGTTGGTACGGCAATTGCGGGCA
GTCGGCGCTGACACTGTGCCTGACGCAGACGTTTGCATACAATGACAGCGTCTATGCTGG
CACCTTCTCGCTCTTGGGGAGTGGCGTTGCGTTCGATCCAGTGAAGTACGCGCCCATCGT
GGGCGGCA
■■Homology search results ■■ -
sp_hit_id P13240
Definition sp|P13240|DR206_PEA Disease resistance response protein 206 OS=Pisum sativum
Align length 127
Score (bit) 44.3
E-value 0.0005
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957577|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_L20, 5'
         (608 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13240|DR206_PEA Disease resistance response protein 206 OS=P...    44   5e-04
sp|A8G9K9|DNAJ_SERP5 Chaperone protein dnaJ OS=Serratia proteama...    30   7.4  
sp|Q0A7J2|LPXB_ALHEH Lipid-A-disaccharide synthase OS=Alkalilimn...    30   9.6  

>sp|P13240|DR206_PEA Disease resistance response protein 206
           OS=Pisum sativum GN=PI206 PE=2 SV=2
          Length = 184

 Score = 44.3 bits (103), Expect = 5e-04
 Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 5/127 (3%)
 Frame = +2

Query: 242 KKKP----KKLSFFMFIAVQNNSFLDNPNGQFTAVLSGEAPVTPQPFA-FGNLHTFDNPL 406
           K+KP    K L F+    + N     N      A   G +     P + FGN+  FD+P+
Sbjct: 24  KRKPYKPCKNLVFYFHDILYNGKNAANATSAIVAAPEGVSLTKLAPQSHFGNIIVFDDPI 83

Query: 407 SKTMSLANPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDSVYAGTFSLLGSGVAFDPVK 586
           + + SL+  + +VG  QG+Y    ++  T  L+ TF  N + + GT +  G+       +
Sbjct: 84  TLSHSLS--SKQVGRAQGFYIYDTKNTYTSWLSFTFVLNSTHHQGTITFAGADPIVAKTR 141

Query: 587 YAPIVGG 607
              + GG
Sbjct: 142 DISVTGG 148


>sp|A8G9K9|DNAJ_SERP5 Chaperone protein dnaJ OS=Serratia
           proteamaculans (strain 568) GN=dnaJ PE=3 SV=1
          Length = 375

 Score = 30.4 bits (67), Expect = 7.4
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = -3

Query: 402 GLSKVCRLPKAKGCGV---TGASPDSTAVNCP 316
           G++K  R+P  + CGV   +GA P S+ V CP
Sbjct: 130 GVTKEIRIPTLEECGVCHGSGAKPGSSPVTCP 161


>sp|Q0A7J2|LPXB_ALHEH Lipid-A-disaccharide synthase
           OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=lpxB
           PE=3 SV=1
          Length = 382

 Score = 30.0 bits (66), Expect = 9.6
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
 Frame = -2

Query: 490 QRRLPAIAVPTLHVANP---VGRIGQ*HRLGQRI--VKGVQIAEGEGLRRHG 350
           +RRL A+ VPT+H  +P     R G+   +G+ +  +  +   E E  RRHG
Sbjct: 101 ERRLKAVGVPTVHYVSPQVWAWRQGRVRTIGRSVDRILALYPFEAEFYRRHG 152
tr_hit_id A7P031
Definition tr|A7P031|A7P031_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera
Align length 121
Score (bit) 55.5
E-value 2.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957577|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_L20, 5'
         (608 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7P031|A7P031_VITVI Chromosome chr6 scaffold_3, whole genome ...    55   2e-06
tr|A7P030|A7P030_VITVI Chromosome chr6 scaffold_3, whole genome ...    55   2e-06
tr|A5B702|A5B702_VITVI Putative uncharacterized protein OS=Vitis...    55   2e-06
tr|A7P884|A7P884_VITVI Chromosome chr3 scaffold_8, whole genome ...    54   7e-06
tr|A7P032|A7P032_VITVI Chromosome chr6 scaffold_3, whole genome ...    53   1e-05
tr|A2ZC31|A2ZC31_ORYSI Putative uncharacterized protein OS=Oryza...    53   1e-05
tr|A9PCN5|A9PCN5_POPTR Putative uncharacterized protein OS=Popul...    53   2e-05
tr|A5BN88|A5BN88_VITVI Putative uncharacterized protein (Fragmen...    53   2e-05
tr|Q9C523|Q9C523_ARATH Dirigent protein, putative (At1g58170) (P...    51   5e-05
tr|Q53NP4|Q53NP4_ORYSJ Dirigent-like protein OS=Oryza sativa sub...    51   5e-05
tr|A5AKQ8|A5AKQ8_VITVI Putative uncharacterized protein OS=Vitis...    51   6e-05
tr|A5BN87|A5BN87_VITVI Putative uncharacterized protein (Fragmen...    50   1e-04
tr|A7P029|A7P029_VITVI Chromosome chr6 scaffold_3, whole genome ...    50   1e-04
tr|A7P028|A7P028_VITVI Chromosome chr6 scaffold_3, whole genome ...    50   1e-04
tr|Q1KPV7|Q1KPV7_9CARY Dirigent-related protein OS=Tamarix andro...    49   2e-04
tr|Q9SKQ3|Q9SKQ3_ARATH Putative disease resistance response prot...    49   2e-04
tr|Q84TH6|Q84TH6_ARATH Putative disease resistance response prot...    49   2e-04
tr|A7PW09|A7PW09_VITVI Chromosome chr8 scaffold_34, whole genome...    49   2e-04
tr|Q9LDS3|Q9LDS3_9LAMI Dirigent-like protein (Fragment) OS=Fraxi...    48   4e-04
tr|Q27JA8|Q27JA8_9CONI Dirigent-like protein pDIR4 (Fragment) OS...    48   4e-04
tr|Q27JA3|Q27JA3_9CONI Dirigent-like protein pDIR9 OS=Picea enge...    48   4e-04
tr|Q9C891|Q9C891_ARATH Putative uncharacterized protein F7A10.7 ...    48   5e-04
tr|A7P024|A7P024_VITVI Chromosome chr6 scaffold_3, whole genome ...    48   5e-04
tr|Q45W75|Q45W75_ARAHY Disease resistance-responsive family prot...    47   9e-04
tr|B6TFK6|B6TFK6_MAIZE Disease resistance response protein 206 O...    47   9e-04
tr|A7PW02|A7PW02_VITVI Chromosome chr8 scaffold_34, whole genome...    47   9e-04
tr|B6TW62|B6TW62_MAIZE Disease resistance response protein 206 O...    46   0.001
tr|Q8L7P2|Q8L7P2_ARATH Putative uncharacterized protein At1g5521...    46   0.002
tr|Q27JA1|Q27JA1_PICSI Dirigent-like protein pDIR11 OS=Picea sit...    45   0.003
tr|A8IXC7|A8IXC7_BRACM Disease resistance response protein OS=Br...    45   0.003

>tr|A7P031|A7P031_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024747001
           PE=4 SV=1
          Length = 195

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
 Frame = +2

Query: 248 KPKKLSFFMFIAVQNNSFLDNPNGQFTAVLSGEAPVTPQPFAFGNLHTFDNPLSKTMSLA 427
           + +KLS F F       + DN +G+    +   AP T    AFG ++  DNPL+    L+
Sbjct: 47  RKEKLSHFRFY------WHDNVSGRNPTSIQVVAPPTNSTTAFGLVNMIDNPLTIEPKLS 100

Query: 428 NPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDSVYAG-TFSLLGSGVAFDPVKYAPIVG 604
             +  VG  QG Y +  Q  + L +   FA+ D  Y G TF++LG    F  V+   ++ 
Sbjct: 101 --SKMVGKAQGLYTSASQEEIGLLMIMNFAFFDGKYNGSTFTVLGRNTVFSKVREMSVIS 158

Query: 605 G 607
           G
Sbjct: 159 G 159


>tr|A7P030|A7P030_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024746001
           PE=4 SV=1
          Length = 205

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
 Frame = +2

Query: 350 PVTPQPFAFGNLHTFDNPLSKTMSLANPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDS 529
           PV      FG+++  DNPL+    L +    VG  QG+Y + GQ    L +   FA+ND 
Sbjct: 86  PVNNSSTFFGSINMIDNPLTIEPKLNSKM--VGKAQGFYASAGQENFGLLMVMNFAFNDD 143

Query: 530 VYAG-TFSLLGSGVAFDPVKYAPIVGG 607
            Y G TF+++G    F  V+   IVGG
Sbjct: 144 KYNGSTFTVIGRNDVFSKVREMEIVGG 170


>tr|A5B702|A5B702_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_029647 PE=4 SV=1
          Length = 193

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
 Frame = +2

Query: 350 PVTPQPFAFGNLHTFDNPLSKTMSLANPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDS 529
           PV      FG+++  DNPL+    L +    VG  QG+Y + GQ    L +   FA+ND 
Sbjct: 74  PVNNSSTFFGSINMIDNPLTIEPKLNSKM--VGKAQGFYASAGQENFGLLMVMNFAFNDD 131

Query: 530 VYAG-TFSLLGSGVAFDPVKYAPIVGG 607
            Y G TF+++G    F  V+   IVGG
Sbjct: 132 KYNGSTFTVIGRNDVFSKVREMEIVGG 158


>tr|A7P884|A7P884_VITVI Chromosome chr3 scaffold_8, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00036083001
           PE=4 SV=1
          Length = 365

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
 Frame = +2

Query: 326 TAVLSGEAPVTPQ-PFAFGNLHTFDNPLSKTMSLANPADRVGHVQGWYGNCGQSALTLCL 502
           TAV   +A  T + P  FG L   D+PL++   L++    VG  QG YG+  Q    L +
Sbjct: 55  TAVRVAQASQTDKSPTLFGALLMADDPLTEGPDLSSKL--VGRAQGLYGSASQEGFGLIM 112

Query: 503 TQTFAYNDSVYAGT-FSLLGSGVAFDPVKYAPIVGG 607
             ++ + D +Y G+  S+LG   A +PV+  P+VGG
Sbjct: 113 ALSYGFCDGIYNGSSISVLGLNQALNPVRELPVVGG 148


>tr|A7P032|A7P032_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024748001
           PE=4 SV=1
          Length = 194

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
 Frame = +2

Query: 248 KPKKLSFFMFIAVQNNSFLDNPNGQFTAVLSGEAPVTPQPFAFGNLHTFDNPLSKTMSLA 427
           + +KLS F F     +  +  PN     V+S   P T    AFG ++  DNPL+    L+
Sbjct: 46  RKEKLSHFRFYW---HDIVSGPNPSSIQVVS---PPTNSTTAFGLINMIDNPLTVGPKLS 99

Query: 428 NPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDSVYAG-TFSLLGSGVAFDPVKYAPIVG 604
             +  VG  QG Y +  Q  + L +   FA+ D  Y G TF++LG       V+   ++G
Sbjct: 100 --SKMVGKAQGLYTSASQEEIGLLMIMNFAFIDDKYNGSTFTVLGRNTVLSKVREMSVIG 157

Query: 605 G 607
           G
Sbjct: 158 G 158


>tr|A2ZC31|A2ZC31_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_35336 PE=4 SV=1
          Length = 178

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
 Frame = +2

Query: 311 PNGQFTAVLSGEAPVT-PQPFAFGNLHTFDNPLSKTMSLANPADRVGHVQGWYGNCGQSA 487
           PN     V   EAP +      FG ++  D+PL+   SL  P+  VGHVQG Y + G+  
Sbjct: 45  PNSMVAKV--AEAPTSRASATVFGTVYVIDDPLTDGPSLTAPSRLVGHVQGMYVSAGKET 102

Query: 488 LTLCLTQTFAY-NDSVYAGTFSLLGSGVAFDPVKYAPIVGG 607
           ++L +  +F +  D  Y G+   +       PV+  P+VGG
Sbjct: 103 MSLLMAMSFVFAADEPYNGSSVAIFGPNPARPVREIPVVGG 143


>tr|A9PCN5|A9PCN5_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 157

 Score = 52.8 bits (125), Expect = 2e-05
 Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
 Frame = +2

Query: 248 KPKKLSFFMFIAVQNNSFLDNPNGQFTAVLSGEAPVTPQPFAFGNLHTFDNPLSKTMSLA 427
           K +KLS F    V  +  L  PN     V+    P+     AFG +   DNPL  T+   
Sbjct: 9   KKEKLSHFK---VYWHDILTGPNPSSIQVVP---PLNTSITAFGLVRMIDNPL--TLGPE 60

Query: 428 NPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDSVYAG-TFSLLGSGVAFDPVKYAPIVG 604
             +  VG  QG+Y    Q  L L +   FA+ +  Y G T ++LG    F  V+  P++G
Sbjct: 61  MSSRMVGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIG 120

Query: 605 G 607
           G
Sbjct: 121 G 121


>tr|A5BN88|A5BN88_VITVI Putative uncharacterized protein (Fragment)
           OS=Vitis vinifera GN=VITISV_009709 PE=4 SV=1
          Length = 168

 Score = 52.8 bits (125), Expect = 2e-05
 Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
 Frame = +2

Query: 248 KPKKLSFFMFIAVQNNSFLDNPNGQFTAVLSGEAPVTPQPFAFGNLHTFDNPLSKTMSLA 427
           + +KLS F F     +  +  PN     V+S   P T    AFG ++  DNPL+    L+
Sbjct: 46  RKEKLSHFRFYW---HDIVSGPNPSSIQVVS---PPTNSTTAFGLINMIDNPLTVGPKLS 99

Query: 428 NPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDSVYAG-TFSLLGSGVAFDPVKYAPIVG 604
             +  VG  QG Y +  Q  + L +   FA+ D  Y G TF++LG       V+   ++G
Sbjct: 100 --SKMVGKAQGLYTSASQEEIGLLMIMNFAFIDXKYNGSTFTVLGRNTVLSKVREMSVIG 157

Query: 605 G 607
           G
Sbjct: 158 G 158


>tr|Q9C523|Q9C523_ARATH Dirigent protein, putative (At1g58170)
           (Putative uncharacterized protein
           At1g58170/68103_m00125) (Putative uncharacterized
           protein T15M6.17) OS=Arabidopsis thaliana
           GN=At1g58170/68103_m00125 PE=2 SV=1
          Length = 185

 Score = 51.2 bits (121), Expect = 5e-05
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
 Frame = +2

Query: 374 FGNLHTFDNPLSKTMSLANPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDSVYAG-TFS 550
           FG +   DNPL+ T  L++    VG  QG+Y    +  + L +   FA  D  Y G T +
Sbjct: 73  FGLMRMIDNPLTLTPKLSSKM--VGRAQGFYAGTSKEEIGLLMAMNFAILDGKYNGSTIT 130

Query: 551 LLGSGVAFDPVKYAPIVGG 607
           +LG    FD V+  P++GG
Sbjct: 131 VLGRNSVFDKVREMPVIGG 149


>tr|Q53NP4|Q53NP4_ORYSJ Dirigent-like protein OS=Oryza sativa subsp.
           japonica GN=LOC_Os11g07710 PE=4 SV=1
          Length = 178

 Score = 51.2 bits (121), Expect = 5e-05
 Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
 Frame = +2

Query: 233 AEAKKKPKKLSFFMFIAVQNNSFLDNPNGQFTAVLSGEAPVT-PQPFAFGNLHTFDNPLS 409
           AEA  + K+    M + V  +  +  PN     V   EAP +      FG ++  D+PL+
Sbjct: 23  AEAAGQQKE----MRMRVYWHDVVTGPNSTVAKV--AEAPTSRASATVFGTVYVIDDPLT 76

Query: 410 KTMSLANPADRVGHVQGWYGNCGQSALTLCLTQTFAY-NDSVYAGTFSLLGSGVAFDPVK 586
              SL  P+  VGH QG Y + G+  ++L +  +F +  D  Y G+   +       PV 
Sbjct: 77  DGPSLTAPSRLVGHAQGMYVSAGKETMSLLMAMSFVFAADEPYNGSSVAIFGPNPARPVS 136

Query: 587 YAPIVGG 607
             P+VGG
Sbjct: 137 EIPVVGG 143