DK957567 |
Clone id |
TST39A01NGRL0028_L10 |
Library |
TST39 |
Length |
595 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_L10. 5' end sequence. |
Accession |
DK957567 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1129Contig1 |
Sequence |
CGCCCCAAAGTTTTGGTCGTGGGCTGTAGCAGCGGAGTCGGCTTGCAGGCTACAAAAAAG CTTTTGGACAAAAATGAGGAATTTGAGACTGTGTGTCTTGTCAGAAATCAAGAGAAGGCA GCTCGGGCAATCGGTGAAGACGCAGGAAAAGTAAAGTTCATAAATGGGGACATTACAAAA GTTGAGACTCTGGAGCCAGCATGTCAAGGTATGGATGTGGTAGTTTGCTCAGTTGGAGCA ACTGTAGGTTGGCGTTTACCGGGTTCTAATGCAAACACACCAAAGAATGTGGATTACCTA GGAGTGAAGAACCTCAGTGAAGCTGCAGCTCGTGCAAAGGTTCCCAGGTTCGTCCTCGTA TCATCAATGCTGGTAACTCGGCCTTGGCACCCATATGCCCTGGTTTTGAACACAGGTTTT GGAGATGTACTACGATGGAAGCTTAAGAGTGAGAAATGCTTACGAGAATCATACAAGCAA CAGCCGAATATGAGTTACAATATAGTGCGACCTGGCGGCTTGACAAACAAAACGGGTGGC AAAGAAACAAATACTATTTGAGCAGGGTGACAAAAGGCAGTGGTTTTATCACAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O80934 |
Definition |
sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana |
Align length |
175 |
Score (bit) |
76.6 |
E-value |
9.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957567|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0028_L10, 5' (595 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chlorop... 77 9e-14 sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240 OS=Arabi... 76 1e-13 sp|Q8H124|Y2446_ARATH Uncharacterized protein At2g34460, chlorop... 63 1e-09 sp|Q64421|3BHS2_MESAU 3 beta-hydroxysteroid dehydrogenase/Delta ... 49 3e-05 sp|Q61694|3BHS5_MOUSE 3 beta-hydroxysteroid dehydrogenase type 5... 48 3e-05 sp|Q61767|3BHS4_MOUSE 3 beta-hydroxysteroid dehydrogenase type 4... 48 4e-05 sp|P26149|3BHS2_MOUSE 3 beta-hydroxysteroid dehydrogenase/Delta ... 46 1e-04 sp|P24815|3BHS1_MOUSE 3 beta-hydroxysteroid dehydrogenase/Delta ... 46 2e-04 sp|Q60555|3BHS1_MESAU 3 beta-hydroxysteroid dehydrogenase/Delta ... 46 2e-04 sp|O35469|3BHS6_MOUSE 3 beta-hydroxysteroid dehydrogenase/Delta ... 45 4e-04 sp|Q62878|3BHS4_RAT 3 beta-hydroxysteroid dehydrogenase/Delta 5-... 44 5e-04 sp|P22071|3BHS1_RAT 3 beta-hydroxysteroid dehydrogenase/Delta 5-... 44 5e-04 sp|P26150|3BHS3_MOUSE 3 beta-hydroxysteroid dehydrogenase/Delta ... 44 6e-04 sp|O35296|3BHS3_MESAU 3 beta-hydroxysteroid dehydrogenase type 3... 44 6e-04 sp|P49534|YCF39_ODOSI Uncharacterized protein ycf39 OS=Odontella... 43 0.001 sp|P22072|3BHS2_RAT 3 beta-hydroxysteroid dehydrogenase/Delta 5-... 42 0.002 sp|Q5IFP1|3BHS_CANFA 3 beta-hydroxysteroid dehydrogenase/Delta 5... 42 0.002 sp|O07609|YHFK_BACSU Uncharacterized sugar epimerase yhfK OS=Bac... 42 0.003 sp|P27364|3BHS5_RAT 3 beta-hydroxysteroid dehydrogenase type 5 O... 42 0.003 sp|O46516|3BHS_HORSE 3 beta-hydroxysteroid dehydrogenase/Delta 5... 41 0.005 sp|Q8WUS8|YP022_HUMAN 3-beta-HSD family protein HSPC105 OS=Homo ... 39 0.020 sp|P48279|YCF39_CYAPA Uncharacterized protein ycf39 OS=Cyanophor... 39 0.020 sp|Q9N119|3BHS_PIG 3 beta-hydroxysteroid dehydrogenase/Delta 5--... 39 0.026 sp|P14893|3BHS_BOVIN 3 beta-hydroxysteroid dehydrogenase/Delta 5... 39 0.026 sp|Q4R7R1|YP022_MACFA 3-beta-HSD family protein HSPC105 homolog ... 38 0.034 sp|Q15738|NSDHL_HUMAN Sterol-4-alpha-carboxylate 3-dehydrogenase... 37 0.098 sp|O19883|YCF39_CYACA Uncharacterized protein ycf39 OS=Cyanidium... 36 0.17 sp|Q3ZBE9|NSDHL_BOVIN Sterol-4-alpha-carboxylate 3-dehydrogenase... 36 0.17 sp|P26439|3BHS2_HUMAN 3 beta-hydroxysteroid dehydrogenase/Delta ... 36 0.17 sp|P14060|3BHS1_HUMAN 3 beta-hydroxysteroid dehydrogenase/Delta ... 35 0.22
>sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE=1 SV=2 Length = 325
Score = 76.6 bits (187), Expect = 9e-14 Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 13/175 (7%) Frame = +1
Query: 55 KKLLDKNEEFETVCLVRNQEKAARAIGEDAGKVKFINGDITKVETLEPACQGMDVVVCSV 234 KKL +++E+F LVR +E + GED + GDI ++ PA +G+D +V Sbjct: 94 KKLKERSEQFVARGLVRTKESKEKINGED----EVFIGDIRDTASIAPAVEGIDALVILT 149
Query: 235 GATVGWRLPGSNANT-------------PKNVDYLGVKNLSEAAARAKVPRFVLVSSMLV 375 A + PG + + P+ VD++G KN +AA A V + VLV SM Sbjct: 150 SAVPQMK-PGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQIDAAKAAGVKQIVLVGSMGG 208
Query: 376 TRPWHPYALVLNTGFGDVLRWKLKSEKCLRESYKQQPNMSYNIVRPGGLTNKTGG 540 T HP + + G ++L WK K+E+ L +S + Y I+R GGL +K GG Sbjct: 209 TNINHP---LNSIGNANILVWKRKAEQYLADS-----GIPYTIIRAGGLQDKDGG 255
>sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240 OS=Arabidopsis thaliana GN=At5g02240 PE=1 SV=1 Length = 253
Score = 75.9 bits (185), Expect = 1e-13 Identities = 58/175 (33%), Positives = 85/175 (48%), Gaps = 13/175 (7%) Frame = +1
Query: 55 KKLLDKNEEFETVCLVRNQEKAARAIGEDAGKVKFINGDITKVETLEPACQGMDVVVCSV 234 KKL + +++F LVR+ + + GE GDIT +++ PA QG+D +V Sbjct: 22 KKLKEGSDKFVAKGLVRSAQGKEKIGGE----ADVFIGDITDADSINPAFQGIDALVILT 77
Query: 235 GATVGWRLPG-------------SNANTPKNVDYLGVKNLSEAAARAKVPRFVLVSSMLV 375 A + PG + P+ VD++G KN +AA A V V+V SM Sbjct: 78 SAVPKMK-PGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGG 136
Query: 376 TRPWHPYALVLNTGFGDVLRWKLKSEKCLRESYKQQPNMSYNIVRPGGLTNKTGG 540 T P HP + G G++L WK K+E+ L +S Y I+R GGL +K GG Sbjct: 137 TNPDHP---LNKLGNGNILVWKRKAEQYLADS-----GTPYTIIRAGGLLDKEGG 183
>sp|Q8H124|Y2446_ARATH Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460 PE=1 SV=1 Length = 280
Score = 63.2 bits (152), Expect = 1e-09 Identities = 56/170 (32%), Positives = 86/170 (50%), Gaps = 9/170 (5%) Frame = +1
Query: 46 QATKKLLDK--NEEFETVCLVRNQEKAARAIGEDAGKVKFINGDITKVETLEPACQGMD- 216 Q K+++++ + F VR+ EKA + +D ++ + D+T+ G D Sbjct: 57 QTGKRIVEQLLSRGFAVKAGVRDVEKAKTSFKDDPS-LQIVRADVTEGPDKLAEVIGDDS 115
Query: 217 -VVVCSVGATVGWRLPGSNANTPKNVDYLGVKNLSEAAARAKVPRFVLVSSMLVT----- 378 V+C+ G PG + TP VD G NL +A + V +FVLVSS+LV Sbjct: 116 QAVICATGFR-----PGFDIFTPWKVDNFGTVNLVDACRKQGVEKFVLVSSILVNGAAMG 170
Query: 379 RPWHPYALVLNTGFGDVLRWKLKSEKCLRESYKQQPNMSYNIVRPGGLTN 528 + +P L LN FG L KL++EK +++S ++Y IVRPGGL N Sbjct: 171 QILNPAYLFLNL-FGLTLVAKLQAEKYIKKS-----GINYTIVRPGGLKN 214
>sp|Q64421|3BHS2_MESAU 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2 OS=Mesocricetus auratus GN=HSD3B2 PE=2 SV=3 Length = 373
Score = 48.5 bits (114), Expect = 3e-05 Identities = 31/88 (35%), Positives = 44/88 (50%) Frame = +1
Query: 148 KVKFINGDITKVETLEPACQGMDVVVCSVGATVGWRLPGSNANTPKNVDYLGVKNLSEAA 327 KV + GDI + L ACQG+ VV+ + A W + T +++ G NL EA Sbjct: 55 KVTVLEGDILDAQCLRRACQGISVVIHTAAAIDVWGI--IPRQTIIDINVKGTLNLLEAC 112
Query: 328 ARAKVPRFVLVSSMLVTRPWHPYALVLN 411 +A VP F+ SS+ V P +VLN Sbjct: 113 VQASVPAFIYTSSIDVAGPNSYKEIVLN 140
>sp|Q61694|3BHS5_MOUSE 3 beta-hydroxysteroid dehydrogenase type 5 OS=Mus musculus GN=Hsd3b5 PE=1 SV=4 Length = 373
Score = 48.1 bits (113), Expect = 3e-05 Identities = 30/88 (34%), Positives = 46/88 (52%) Frame = +1
Query: 148 KVKFINGDITKVETLEPACQGMDVVVCSVGATVGWRLPGSNANTPKNVDYLGVKNLSEAA 327 KV+ + GDI + L+ ACQGM V+ + A L ++ T +V+ G + L +A Sbjct: 55 KVRVLKGDILDAQCLKRACQGMSAVIHTAAAID--PLGAASRQTILDVNLKGTQLLLDAC 112
Query: 328 ARAKVPRFVLVSSMLVTRPWHPYALVLN 411 A VP F+ SS+LV P ++LN Sbjct: 113 VEASVPTFIYSSSVLVAGPNSYKEIILN 140
>sp|Q61767|3BHS4_MOUSE 3 beta-hydroxysteroid dehydrogenase type 4 OS=Mus musculus GN=Hsd3b4 PE=2 SV=3 Length = 373
Score = 47.8 bits (112), Expect = 4e-05 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 5/127 (3%) Frame = +1
Query: 46 QATKKLLDKNEEFETVCLV-----RNQEKAARAIGEDAGKVKFINGDITKVETLEPACQG 210 Q ++L + EE + + + R QE+ + + KV + GDI + L+ ACQG Sbjct: 17 QRIVRMLVQEEELQEIRALFRTFGRKQEEELSKL-QTKTKVTVLKGDILDAQCLKRACQG 75
Query: 211 MDVVVCSVGATVGWRLPGSNANTPKNVDYLGVKNLSEAAARAKVPRFVLVSSMLVTRPWH 390 M V+ + A L ++ T +V+ G + L +A A VP F+ SS+LV P Sbjct: 76 MSAVIHTAAAID--PLGAASRQTILDVNLKGTQLLLDACVEANVPTFIYSSSVLVAGPNS 133
Query: 391 PYALVLN 411 ++LN Sbjct: 134 YKEIILN 140
>sp|P26149|3BHS2_MOUSE 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2 OS=Mus musculus GN=Hsd3b2 PE=2 SV=3 Length = 373
Score = 46.2 bits (108), Expect = 1e-04 Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Frame = +1
Query: 136 EDAGKVKFINGDITKVETLEPACQGMDVVVCSVGAT-VGWRLPGSNANTPKNVDYLGVKN 312 E + KV + GDI + L ACQG+ VV+ + V +P T +V+ G +N Sbjct: 51 ETSNKVTVLEGDILDTQYLRRACQGISVVIHTAAIIDVTGVIP---RQTILDVNLKGTQN 107
Query: 313 LSEAAARAKVPRFVLVSSMLVTRPWHPYALVLN 411 L EA +A VP F+ SS+ V P +VLN Sbjct: 108 LLEACIQASVPAFIFSSSVDVAGPNSYKEIVLN 140
>sp|P24815|3BHS1_MOUSE 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1 OS=Mus musculus GN=Hsd3b1 PE=2 SV=3 Length = 373
Score = 45.8 bits (107), Expect = 2e-04 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 1/89 (1%) Frame = +1
Query: 148 KVKFINGDITKVETLEPACQGMDVVVCSVGAT-VGWRLPGSNANTPKNVDYLGVKNLSEA 324 KV + GDI + L ACQG+ VV+ + V +P T +V+ G +NL EA Sbjct: 55 KVTVLEGDILDAQCLRRACQGISVVIHTAAVIDVTGVIP---RQTILDVNLKGTQNLLEA 111
Query: 325 AARAKVPRFVLVSSMLVTRPWHPYALVLN 411 +A VP F+ SS+ V P +VLN Sbjct: 112 CVQASVPAFIFCSSVDVAGPNSYKKIVLN 140
>sp|Q60555|3BHS1_MESAU 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1 OS=Mesocricetus auratus GN=HSD3B1 PE=2 SV=3 Length = 373
Score = 45.8 bits (107), Expect = 2e-04 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 1/89 (1%) Frame = +1
Query: 148 KVKFINGDITKVETLEPACQGMDVVVCSVGAT-VGWRLPGSNANTPKNVDYLGVKNLSEA 324 KV + GDI + L ACQG+ VV+ + A V +P T +++ G NL EA Sbjct: 55 KVTVLEGDILDAQCLRRACQGISVVIHTAAAIDVFGAIP---RQTIIDINLKGTLNLLEA 111
Query: 325 AARAKVPRFVLVSSMLVTRPWHPYALVLN 411 +A VP F+ SS+ V P +VLN Sbjct: 112 CVQASVPAFIYTSSIDVAGPNSYKEIVLN 140
>sp|O35469|3BHS6_MOUSE 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 6 OS=Mus musculus GN=Hsd3b6 PE=2 SV=3 Length = 373
Score = 44.7 bits (104), Expect = 4e-04 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%) Frame = +1
Query: 148 KVKFINGDITKVETLEPACQGMDVVVCSVGAT-VGWRLPGSNANTPKNVDYLGVKNLSEA 324 KV + GDI + L ACQG+ VV+ + V +P T +V+ G +NL EA Sbjct: 55 KVTVLEGDILDTQYLRKACQGISVVIHTAAVIDVTGVIP---RQTILDVNLKGTQNLLEA 111
Query: 325 AARAKVPRFVLVSSMLVTRPWHPYALVLN 411 +A VP F+ SS+ V P ++LN Sbjct: 112 CIQASVPAFIFSSSVDVAGPNSYKEIILN 140
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SBX4 |
Definition |
tr|A9SBX4|A9SBX4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
165 |
Score (bit) |
175.0 |
E-value |
2.0e-42 |
Report |
|